BLASTX nr result

ID: Cnidium21_contig00024100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024100
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624606.1| CCR4-NOT transcription complex subunit [Medi...   162   3e-38
emb|CBI29924.3| unnamed protein product [Vitis vinifera]              147   1e-33
emb|CAN83574.1| hypothetical protein VITISV_041711 [Vitis vinifera]   147   1e-33
ref|XP_003554004.1| PREDICTED: uncharacterized protein LOC100785...   144   6e-33
ref|XP_002525444.1| conserved hypothetical protein [Ricinus comm...   142   4e-32

>ref|XP_003624606.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|124365585|gb|ABN09819.1| Not CCR4-Not complex
           component, N-terminal; tRNA-binding arm [Medicago
           truncatula] gi|355499621|gb|AES80824.1| CCR4-NOT
           transcription complex subunit [Medicago truncatula]
          Length = 901

 Score =  162 bits (409), Expect = 3e-38
 Identities = 83/116 (71%), Positives = 96/116 (82%), Gaps = 3/116 (2%)
 Frame = -2

Query: 339 SLGVLAPSASEITKRSILGTDEKFTSTGIAQPLVSPLGSRLMVPQAAKAND---MTDSGT 169
           +LGV+ PSASEITKR+ILG D++  S+G+ QPLVSPL +RL++PQ  KAND     DS  
Sbjct: 435 ALGVV-PSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQIGKANDGAASVDSSI 493

Query: 168 VRETAGMSGRVFSPSVVPGMQWRPGSFFQNQNEAGQFRGRTEIAPDQREKFLQRFQ 1
           V E A +SGRVFSPSVVPGMQWRPGS FQNQN+AGQ RGRTEIAPDQREKFLQ+FQ
Sbjct: 494 VNEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKFQ 549


>emb|CBI29924.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/110 (66%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
 Frame = -2

Query: 321 PSASEITKRSILGTDEKFTSTGIAQPLVSPLGSRLMVPQAAKANDMT---DSGTVRETAG 151
           PSA++++KRS LG DE+    G+ QPLVSPL +R+++PQ AK ND T   DS +V E A 
Sbjct: 430 PSANDMSKRSTLGADERLGGGGMVQPLVSPLSNRMILPQTAKTNDGTGLADSSSVGEAAV 489

Query: 150 MSGRVFSPSVVPGMQWRPGSFFQNQNEAGQFRGRTEIAPDQREKFLQRFQ 1
           ++GRVFSPSVVPGMQWRPGS FQNQNE+GQFRGRTEI  DQ+EKFLQR Q
Sbjct: 490 IAGRVFSPSVVPGMQWRPGSSFQNQNESGQFRGRTEITLDQKEKFLQRLQ 539


>emb|CAN83574.1| hypothetical protein VITISV_041711 [Vitis vinifera]
          Length = 652

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/110 (66%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
 Frame = -2

Query: 321 PSASEITKRSILGTDEKFTSTGIAQPLVSPLGSRLMVPQAAKANDMT---DSGTVRETAG 151
           PSA++++KRS LG DE+    G+ QPLVSPL +R+++PQ AK ND T   DS +V E A 
Sbjct: 430 PSANDMSKRSTLGADERLGGGGMVQPLVSPLSNRMILPQTAKTNDGTGLADSSSVGEAAV 489

Query: 150 MSGRVFSPSVVPGMQWRPGSFFQNQNEAGQFRGRTEIAPDQREKFLQRFQ 1
           ++GRVFSPSVVPGMQWRPGS FQNQNE+GQFRGRTEI  DQ+EKFLQR Q
Sbjct: 490 IAGRVFSPSVVPGMQWRPGSSFQNQNESGQFRGRTEITLDQKEKFLQRLQ 539


>ref|XP_003554004.1| PREDICTED: uncharacterized protein LOC100785965 [Glycine max]
          Length = 882

 Score =  144 bits (364), Expect = 6e-33
 Identities = 80/120 (66%), Positives = 95/120 (79%), Gaps = 3/120 (2%)
 Frame = -2

Query: 351 SQQWSLGVLAPSASEITKRSILGTDEKFTSTGIAQPLVSPLGSRLMVPQAAKAND---MT 181
           S   +LG ++ SASEI KR+ILG D++  S+G+ QPLVSPL +RL++PQAAKAND   + 
Sbjct: 414 SSNGALGSVS-SASEIAKRNILGADDRLGSSGMVQPLVSPLSNRLILPQAAKANDGTVLV 472

Query: 180 DSGTVRETAGMSGRVFSPSVVPGMQWRPGSFFQNQNEAGQFRGRTEIAPDQREKFLQRFQ 1
           DS TV E A  SGRVFSPS VPGMQWRPGS FQNQN+A   RGRTEIAPDQREKFLQ++Q
Sbjct: 473 DSSTVNEAA--SGRVFSPSGVPGMQWRPGSPFQNQNDA--LRGRTEIAPDQREKFLQKYQ 528


>ref|XP_002525444.1| conserved hypothetical protein [Ricinus communis]
           gi|223535257|gb|EEF36934.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 889

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/110 (65%), Positives = 84/110 (76%), Gaps = 3/110 (2%)
 Frame = -2

Query: 321 PSASEITKRSILGTDEKFTSTGIAQPLVSPLGSRLMVPQAAKANDMT---DSGTVRETAG 151
           P+AS+I KR+IL TD++  S G+ QPL SPL +R+++PQA K  D T   DS  V E A 
Sbjct: 428 PTASDIAKRNILSTDDRLGSGGMVQPLASPLSNRMILPQAGKVGDGTGIVDSNNVGEAAA 487

Query: 150 MSGRVFSPSVVPGMQWRPGSFFQNQNEAGQFRGRTEIAPDQREKFLQRFQ 1
           + GRVFSP +VPGMQWRPGS FQNQNE GQFR RTEI PDQREKFLQRFQ
Sbjct: 488 IGGRVFSP-LVPGMQWRPGSSFQNQNEQGQFRARTEITPDQREKFLQRFQ 536


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