BLASTX nr result

ID: Cnidium21_contig00024093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024093
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36942.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-...   384   e-104
emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]   370   e-100
ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu...   366   4e-99
ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|2...   362   7e-98

>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score =  384 bits (985), Expect = e-104
 Identities = 196/279 (70%), Positives = 220/279 (78%), Gaps = 1/279 (0%)
 Frame = -3

Query: 841  ATYEVLPCSGGSDISRKPYMVLDAAALENLDIFENSRNGGSSGTLYAQLNHCITAFGKRL 662
            A +E+ P SG SDI  KPYMVLDAAALENL+IFENSR G SSGTLYAQLNHC+TAFGKRL
Sbjct: 573  AKFELFPYSGVSDIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRL 632

Query: 661  LKTWLARPLYQIDLIKERQDXXXXXXXXXXXXXA-FRKELSRLQDMERLLSRIFAGSEAS 485
            LKTWLARPLY +D I+ERQD               FRKELSRL DMERLL+RIFA SEA+
Sbjct: 633  LKTWLARPLYHLDSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEAN 692

Query: 484  GRNANKVVLYEDASKKQLQEFISALRGCELMNHACFLLGGTLENISFGPLHHLLTPGKGL 305
            GRNANKVV YEDA+KKQLQEFISALRGCELM  AC  LG  LEN+  G LHHLLTPGKGL
Sbjct: 693  GRNANKVVFYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGKGL 752

Query: 304  PNVQSILKQFKDAFDWVDANNSGRIIPREGADEEYDSACQAVQGIESNLKKHLKEQRKVL 125
            P++ S++  FK+AFDWV+ANNSGRIIP EG D+EYDSAC+ V+ IE  LKKHLKEQ+K+L
Sbjct: 753  PDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQQKLL 812

Query: 124  GDTSINYVTIGKDAYXXXXXXXXXXXXPRDYELQSSKKG 8
            GD SIN+VTIGK+AY            PRDYEL+SSKKG
Sbjct: 813  GDASINFVTIGKEAYLLEVPESLRGNIPRDYELRSSKKG 851


>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
          Length = 1297

 Score =  384 bits (985), Expect = e-104
 Identities = 196/279 (70%), Positives = 220/279 (78%), Gaps = 1/279 (0%)
 Frame = -3

Query: 841  ATYEVLPCSGGSDISRKPYMVLDAAALENLDIFENSRNGGSSGTLYAQLNHCITAFGKRL 662
            A +E+ P SG SDI  KPYMVLDAAALENL+IFENSR G SSGTLYAQLNHC+TAFGKRL
Sbjct: 633  AKFELFPYSGVSDIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRL 692

Query: 661  LKTWLARPLYQIDLIKERQDXXXXXXXXXXXXXA-FRKELSRLQDMERLLSRIFAGSEAS 485
            LKTWLARPLY +D I+ERQD               FRKELSRL DMERLL+RIFA SEA+
Sbjct: 693  LKTWLARPLYHLDSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEAN 752

Query: 484  GRNANKVVLYEDASKKQLQEFISALRGCELMNHACFLLGGTLENISFGPLHHLLTPGKGL 305
            GRNANKVV YEDA+KKQLQEFISALRGCELM  AC  LG  LEN+  G LHHLLTPGKGL
Sbjct: 753  GRNANKVVFYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGKGL 812

Query: 304  PNVQSILKQFKDAFDWVDANNSGRIIPREGADEEYDSACQAVQGIESNLKKHLKEQRKVL 125
            P++ S++  FK+AFDWV+ANNSGRIIP EG D+EYDSAC+ V+ IE  LKKHLKEQ+K+L
Sbjct: 813  PDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQQKLL 872

Query: 124  GDTSINYVTIGKDAYXXXXXXXXXXXXPRDYELQSSKKG 8
            GD SIN+VTIGK+AY            PRDYEL+SSKKG
Sbjct: 873  GDASINFVTIGKEAYLLEVPESLRGNIPRDYELRSSKKG 911


>emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
          Length = 1349

 Score =  370 bits (950), Expect = e-100
 Identities = 196/303 (64%), Positives = 220/303 (72%), Gaps = 25/303 (8%)
 Frame = -3

Query: 841  ATYEVLPCSGGSDISRKPYMVLDAAALENLDIFENSRNGGSSGTLYAQLNHCITAFGKRL 662
            A +E+ P SG SDI  KPYMVLDAAALENL+IFENSR G SSGTLYAQLNHC+TAFGKRL
Sbjct: 641  AKFELFPYSGVSDIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRL 700

Query: 661  LKTWLARPLYQIDLIKERQDXXXXXXXXXXXXXA-FRKELSRLQDMERLLSRIFAGSEAS 485
            LKTWLARPLY +D I+ERQD               FRKELSRL DMERLL+RIFA SEA+
Sbjct: 701  LKTWLARPLYHLDSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEAN 760

Query: 484  GRNANKVVLYEDASKKQLQEFISALRGCELMNHACFLLGGTLENISFGPLHHLLTPG--- 314
            GRNANKVV YEDA+KKQLQEFISALRGCELM  AC  LG  LEN+  G LHHLLTPG   
Sbjct: 761  GRNANKVVFYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGTVG 820

Query: 313  ---------------------KGLPNVQSILKQFKDAFDWVDANNSGRIIPREGADEEYD 197
                                 KGLP++ S++  FK+AFDWV+ANNSGRIIP EG D+EYD
Sbjct: 821  FYVNQIQKSCLASYFLIICAGKGLPDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYD 880

Query: 196  SACQAVQGIESNLKKHLKEQRKVLGDTSINYVTIGKDAYXXXXXXXXXXXXPRDYELQSS 17
            SAC+ V+ IE  LKKHLKEQ+K+LGD SIN+VTIGK+AY            PRDYEL+SS
Sbjct: 881  SACKTVKEIELRLKKHLKEQQKLLGDASINFVTIGKEAYLLEVPESLRGNIPRDYELRSS 940

Query: 16   KKG 8
            KKG
Sbjct: 941  KKG 943


>ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
            gi|223545774|gb|EEF47278.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1306

 Score =  366 bits (939), Expect = 4e-99
 Identities = 186/279 (66%), Positives = 215/279 (77%), Gaps = 1/279 (0%)
 Frame = -3

Query: 841  ATYEVLPCSGGSDISRKPYMVLDAAALENLDIFENSRNGGSSGTLYAQLNHCITAFGKRL 662
            A +E LPCS   D+++KPYM+LDAAALENL+IFENSRNGG SGTLYAQLNHC+TAFGKRL
Sbjct: 648  AKFESLPCSDFCDVAQKPYMILDAAALENLEIFENSRNGGLSGTLYAQLNHCVTAFGKRL 707

Query: 661  LKTWLARPLYQIDLIKERQDXXXXXXXXXXXXXA-FRKELSRLQDMERLLSRIFAGSEAS 485
            LKTWLARPLY +  I +RQD               FRK LSRL DMERL++RIFA SEA+
Sbjct: 708  LKTWLARPLYHLRSIVDRQDAVAGLRGVNQPATLEFRKALSRLPDMERLIARIFASSEAN 767

Query: 484  GRNANKVVLYEDASKKQLQEFISALRGCELMNHACFLLGGTLENISFGPLHHLLTPGKGL 305
            GRNANKV+LYEDA+KK LQEFISALRGCELM  AC  L   LEN+    LHHLLTPGK  
Sbjct: 768  GRNANKVILYEDAAKKLLQEFISALRGCELMEQACSSLAVILENVESRQLHHLLTPGKSR 827

Query: 304  PNVQSILKQFKDAFDWVDANNSGRIIPREGADEEYDSACQAVQGIESNLKKHLKEQRKVL 125
            P++ SILK FK+AFDWV+ANNSGR+IP EG D EYDSAC+ ++ IES+L KHLKEQ+K+L
Sbjct: 828  PHIHSILKHFKEAFDWVEANNSGRVIPHEGVDIEYDSACEKLRVIESSLTKHLKEQQKIL 887

Query: 124  GDTSINYVTIGKDAYXXXXXXXXXXXXPRDYELQSSKKG 8
            GD SI YVT+GK+AY            PRDYEL+SSKKG
Sbjct: 888  GDKSIMYVTVGKEAYLLEVPEHFRGSIPRDYELRSSKKG 926


>ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|222861080|gb|EEE98622.1|
            predicted protein [Populus trichocarpa]
          Length = 1288

 Score =  362 bits (928), Expect = 7e-98
 Identities = 183/278 (65%), Positives = 217/278 (78%), Gaps = 1/278 (0%)
 Frame = -3

Query: 841  ATYEVLPCSGGSDISRKPYMVLDAAALENLDIFENSRNGGSSGTLYAQLNHCITAFGKRL 662
            A +E LPCS   ++++KPYM+LDAAALENL+IFENSRNG +SGTLYAQLNHC+TAFGKRL
Sbjct: 617  AKFESLPCSDFCEVAKKPYMILDAAALENLEIFENSRNGDTSGTLYAQLNHCVTAFGKRL 676

Query: 661  LKTWLARPLYQIDLIKERQDXXXXXXXXXXXXXA-FRKELSRLQDMERLLSRIFAGSEAS 485
            LKTWLARPLY ++ IK+RQD               F+K LS L D+ERLL+RIF+ SEA+
Sbjct: 677  LKTWLARPLYHLESIKDRQDAVAGLRGVNQPMMLEFQKVLSGLPDIERLLARIFSTSEAN 736

Query: 484  GRNANKVVLYEDASKKQLQEFISALRGCELMNHACFLLGGTLENISFGPLHHLLTPGKGL 305
            GRNANKVVLYEDA+KKQLQEFISALRGCEL+  AC  L   LEN+  G LHHLLTPGKGL
Sbjct: 737  GRNANKVVLYEDAAKKQLQEFISALRGCELVAQACSSLAVILENVESGRLHHLLTPGKGL 796

Query: 304  PNVQSILKQFKDAFDWVDANNSGRIIPREGADEEYDSACQAVQGIESNLKKHLKEQRKVL 125
            P++  ILK FK AFDWV+ANNSGRIIP EG D EYDSAC+ V+ +ES+L +HLKEQ+K+L
Sbjct: 797  PDILPILKHFKSAFDWVEANNSGRIIPHEGVDVEYDSACEKVKEVESSLARHLKEQQKLL 856

Query: 124  GDTSINYVTIGKDAYXXXXXXXXXXXXPRDYELQSSKK 11
            GD SI YVT+GK+AY            P+DYEL+SSKK
Sbjct: 857  GDKSITYVTVGKEAYLLEVPEHLRGSIPQDYELRSSKK 894


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