BLASTX nr result

ID: Cnidium21_contig00024087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024087
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   173   1e-41
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   172   3e-41
emb|CBI39701.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_004164311.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   169   2e-40
ref|XP_004150472.1| PREDICTED: ABC transporter C family member 3...   169   2e-40

>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223527170|gb|EEF29340.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/140 (62%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
 Frame = -2

Query: 413 QLASIDSVQGAFPLLKNKLGYGGGSSS--VTTLKLAKALFYAMWKEILLTAFFAMMNTVA 240
           QL S DSV GAFP+ +NKL  G G +   VTT KL KALF++ WKEIL TA  A++ TVA
Sbjct: 82  QLHSGDSVVGAFPVFRNKLELGSGHAGGGVTTFKLVKALFFSAWKEILWTALLALLYTVA 141

Query: 239 SYVGPYLIDTFVQYLNGRQDLK-EGYFLVSAFVISKLIECSTRRQWFFKVQQIGTRGKAA 63
           SYVGPYLID FVQ LNG+   K +GY L SAF++ KL+EC ++R WFF++QQIG R +A 
Sbjct: 142 SYVGPYLIDAFVQCLNGQGAFKNQGYLLASAFLVGKLVECLSQRHWFFRLQQIGIRMRAV 201

Query: 62  LIALIYHKGLTMSCQSKQGH 3
           L+A+IY+KGLT+SCQSKQGH
Sbjct: 202 LVAMIYNKGLTLSCQSKQGH 221


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/139 (62%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
 Frame = -2

Query: 413 QLASIDSVQGAFPLLKNKLGY-GGGSSSVTTLKLAKALFYAMWKEILLTAFFAMMNTVAS 237
           QL + +SV G FP   NKL    GGSS VTTLKL KAL +A W EILLTAF  ++ T+AS
Sbjct: 248 QLDTSNSVAGVFPAFSNKLQCDSGGSSGVTTLKLVKALIFACWAEILLTAFLVLVKTLAS 307

Query: 236 YVGPYLIDTFVQYLNGRQDLK-EGYFLVSAFVISKLIECSTRRQWFFKVQQIGTRGKAAL 60
           YVGPYLIDTFVQYLNGR++ K EGY L  AF ++KL+E  + R WFF++QQ+G R +A L
Sbjct: 308 YVGPYLIDTFVQYLNGRREFKNEGYLLAMAFFVAKLVERLSVRHWFFRLQQVGIRIRAVL 367

Query: 59  IALIYHKGLTMSCQSKQGH 3
           I +IY+KGLT+SCQSKQGH
Sbjct: 368 ITMIYNKGLTLSCQSKQGH 386


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/139 (62%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
 Frame = -2

Query: 413 QLASIDSVQGAFPLLKNKLGY-GGGSSSVTTLKLAKALFYAMWKEILLTAFFAMMNTVAS 237
           QL + +SV G FP   NKL    GGSS VTTLKL KAL +A W EILLTAF  ++ T+AS
Sbjct: 211 QLDTSNSVAGVFPAFSNKLQCDSGGSSGVTTLKLVKALIFACWAEILLTAFLVLVKTLAS 270

Query: 236 YVGPYLIDTFVQYLNGRQDLK-EGYFLVSAFVISKLIECSTRRQWFFKVQQIGTRGKAAL 60
           YVGPYLIDTFVQYLNGR++ K EGY L  AF ++KL+E  + R WFF++QQ+G R +A L
Sbjct: 271 YVGPYLIDTFVQYLNGRREFKNEGYLLAMAFFVAKLVERLSVRHWFFRLQQVGIRIRAVL 330

Query: 59  IALIYHKGLTMSCQSKQGH 3
           I +IY+KGLT+SCQSKQGH
Sbjct: 331 ITMIYNKGLTLSCQSKQGH 349


>ref|XP_004164311.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           3-like [Cucumis sativus]
          Length = 1504

 Score =  169 bits (428), Expect = 2e-40
 Identities = 85/139 (61%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
 Frame = -2

Query: 413 QLASIDSVQGAFPLLKNKLGYGGGS-SSVTTLKLAKALFYAMWKEILLTAFFAMMNTVAS 237
           QLAS D+V G F +L+NKL    G+ + VTTL LAK L Y  WKEILLTA FA + T+A+
Sbjct: 272 QLASRDAVSGTFQILRNKLESECGTINRVTTLSLAKCLLYTAWKEILLTAVFAFIYTLAT 331

Query: 236 YVGPYLIDTFVQYLNGRQDLK-EGYFLVSAFVISKLIECSTRRQWFFKVQQIGTRGKAAL 60
           YVGPYLIDTFVQYLNG +D + EGY L   F ++KL+EC   R WFF+VQQ+G R +AAL
Sbjct: 332 YVGPYLIDTFVQYLNGHRDFENEGYVLACVFFLAKLVECLAMRHWFFRVQQVGIRVRAAL 391

Query: 59  IALIYHKGLTMSCQSKQGH 3
           +A+IY+KGLT+SCQS+Q H
Sbjct: 392 VAMIYNKGLTLSCQSRQQH 410


>ref|XP_004150472.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1504

 Score =  169 bits (428), Expect = 2e-40
 Identities = 85/139 (61%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
 Frame = -2

Query: 413 QLASIDSVQGAFPLLKNKLGYGGGS-SSVTTLKLAKALFYAMWKEILLTAFFAMMNTVAS 237
           QLAS D+V G F +L+NKL    G+ + VTTL LAK L Y  WKEILLTA FA + T+A+
Sbjct: 272 QLASRDAVSGTFQILRNKLESECGTINRVTTLSLAKCLLYTAWKEILLTAVFAFIYTLAT 331

Query: 236 YVGPYLIDTFVQYLNGRQDLK-EGYFLVSAFVISKLIECSTRRQWFFKVQQIGTRGKAAL 60
           YVGPYLIDTFVQYLNG +D + EGY L   F ++KL+EC   R WFF+VQQ+G R +AAL
Sbjct: 332 YVGPYLIDTFVQYLNGHRDFENEGYVLACVFFLAKLVECLAMRHWFFRVQQVGIRVRAAL 391

Query: 59  IALIYHKGLTMSCQSKQGH 3
           +A+IY+KGLT+SCQS+Q H
Sbjct: 392 VAMIYNKGLTLSCQSRQQH 410


Top