BLASTX nr result

ID: Cnidium21_contig00024083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024083
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308357.1| predicted protein [Populus trichocarpa] gi|2...   538   e-151
ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus c...   536   e-150
ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis...   531   e-148
ref|XP_002876454.1| seven in absentia family protein [Arabidopsi...   530   e-148
ref|XP_002323331.1| predicted protein [Populus trichocarpa] gi|2...   527   e-147

>ref|XP_002308357.1| predicted protein [Populus trichocarpa] gi|222854333|gb|EEE91880.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  538 bits (1386), Expect = e-151
 Identities = 246/307 (80%), Positives = 275/307 (89%), Gaps = 1/307 (0%)
 Frame = +3

Query: 96   MAPGGVC-KEVVDSHNKYVKYDVVMAKAEKSNAPVKTGIGSGDKHGMPSTNGVHELLECA 272
            MAPGG   KEV++ H+     DV  +K+E +  P K  +  G KHG+ S NGVHELLEC 
Sbjct: 1    MAPGGSAFKEVLEFHSTVADCDVANSKSENNITPTKGTVVLGGKHGVYSNNGVHELLECP 60

Query: 273  VCTSLMYPPIYQCPNGHTLCSDCKIRVHNCCPTCRLELGNIRCLALEKVAESLELPCKYR 452
            VCT+LMYPPI+QCPNGHTLCS+CK+RVHNCCPTCR +LGNIRCLALEKVAESLELPCK++
Sbjct: 61   VCTNLMYPPIHQCPNGHTLCSNCKLRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKFQ 120

Query: 453  SLGCDDIFPYYSKLKHEQHCRFRPYSCPYAGSECSISSDIPTLVTHLKDDHNVDMHDGCT 632
            SLGC DIFPYYSKLKHEQHCRFRPYSCPYAGSECS++ DIP LV+HLKDDH VDMHDGCT
Sbjct: 121  SLGCLDIFPYYSKLKHEQHCRFRPYSCPYAGSECSVTGDIPALVSHLKDDHKVDMHDGCT 180

Query: 633  FNHRYVKANPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEAKK 812
            FNHRYVK+NPHEVENATWMLTVFNC+GRQFCLHFEAFQLGMAPVY++FLRFMG+D+EAKK
Sbjct: 181  FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 240

Query: 813  FSYSLEVGGYGRKLTWQGVPRSIRDSHRKVRDSLDGLIIPRNLALFFSGGDREELKLRVT 992
            FSYSLEVGG GRKL WQG+PRSIRDSHRKVRDS DGLII RNLAL+FSGGDR+ELKLRVT
Sbjct: 241  FSYSLEVGGNGRKLVWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRQELKLRVT 300

Query: 993  GRIWKEQ 1013
            GR+WKE+
Sbjct: 301  GRVWKEE 307


>ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus communis]
            gi|223525415|gb|EEF28013.1| Ubiquitin ligase SINAT2,
            putative [Ricinus communis]
          Length = 304

 Score =  536 bits (1382), Expect = e-150
 Identities = 247/307 (80%), Positives = 273/307 (88%), Gaps = 1/307 (0%)
 Frame = +3

Query: 96   MAPGG-VCKEVVDSHNKYVKYDVVMAKAEKSNAPVKTGIGSGDKHGMPSTNGVHELLECA 272
            MAPGG  CKEV++SH     Y++  AK E ++   K   G G K G+ S NGVHELLEC 
Sbjct: 1    MAPGGSACKEVLESHPAISDYEIGTAKTENNSTVTK---GLGGKQGLYSNNGVHELLECP 57

Query: 273  VCTSLMYPPIYQCPNGHTLCSDCKIRVHNCCPTCRLELGNIRCLALEKVAESLELPCKYR 452
            VCT+LMYPPI+QCPNGHTLCS+CK RVHNCCPTCR +LGNIRCLALEKVAESLELPCKY+
Sbjct: 58   VCTNLMYPPIHQCPNGHTLCSNCKSRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQ 117

Query: 453  SLGCDDIFPYYSKLKHEQHCRFRPYSCPYAGSECSISSDIPTLVTHLKDDHNVDMHDGCT 632
             LGC DIFPYYSKLKHEQHCRFRPYSCPYAGSECSI+ DIPTLV HLKDDH VDMHDGCT
Sbjct: 118  DLGCHDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPTLVAHLKDDHKVDMHDGCT 177

Query: 633  FNHRYVKANPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEAKK 812
            FNHRYVK+NPHEVENATWMLTVFNC+GRQFCLHFEAFQ+GMAPVY++FLRFMG+D+EAKK
Sbjct: 178  FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQIGMAPVYMAFLRFMGDDNEAKK 237

Query: 813  FSYSLEVGGYGRKLTWQGVPRSIRDSHRKVRDSLDGLIIPRNLALFFSGGDREELKLRVT 992
            FSYSLEVGG GRKL WQG+PRSIRDSHRKVRDS DGLII R+LAL+FSGGDR+ELKLR+T
Sbjct: 238  FSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRIT 297

Query: 993  GRIWKEQ 1013
            GRIWKE+
Sbjct: 298  GRIWKEE 304


>ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
            gi|46577554|sp|Q9M2P4.1|SINA2_ARATH RecName: Full=E3
            ubiquitin-protein ligase SINAT2; AltName: Full=Seven in
            absentia homolog 2 gi|6729547|emb|CAB67632.1| putative
            protein [Arabidopsis thaliana] gi|21593355|gb|AAM65304.1|
            putative RING zinc finger protein [Arabidopsis thaliana]
            gi|105830184|gb|ABF74716.1| At3g58040 [Arabidopsis
            thaliana] gi|332646214|gb|AEE79735.1| E3
            ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
          Length = 308

 Score =  531 bits (1367), Expect = e-148
 Identities = 244/308 (79%), Positives = 277/308 (89%), Gaps = 2/308 (0%)
 Frame = +3

Query: 96   MAPGG-VCKEVVDSHNKYVKYDVVMAKAE-KSNAPVKTGIGSGDKHGMPSTNGVHELLEC 269
            MAPGG   KEV++S++  + Y+V  AK E  +N P K G     K+G+ S NGV+ELLEC
Sbjct: 1    MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLEC 60

Query: 270  AVCTSLMYPPIYQCPNGHTLCSDCKIRVHNCCPTCRLELGNIRCLALEKVAESLELPCKY 449
             VCT+LMYPPI+QCPNGHTLCS+CK+RV N CPTCR ELGNIRCLALEKVAESLE+PC+Y
Sbjct: 61   PVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120

Query: 450  RSLGCDDIFPYYSKLKHEQHCRFRPYSCPYAGSECSISSDIPTLVTHLKDDHNVDMHDGC 629
            ++LGC DIFPYYSKLKHEQHCRFRPY+CPYAGSECS++ DIPTLV HLKDDH VDMHDGC
Sbjct: 121  QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC 180

Query: 630  TFNHRYVKANPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEAK 809
            TFNHRYVK+NPHEVENATWMLTVFNC+GRQFCLHFEAFQLGMAPVY++FLRFMG+++EAK
Sbjct: 181  TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK 240

Query: 810  KFSYSLEVGGYGRKLTWQGVPRSIRDSHRKVRDSLDGLIIPRNLALFFSGGDREELKLRV 989
            KFSYSLEVG +GRKLTWQG+PRSIRDSHRKVRDS DGLIIPRNLAL+FSGGDR+ELKLRV
Sbjct: 241  KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV 300

Query: 990  TGRIWKEQ 1013
            TGRIWKE+
Sbjct: 301  TGRIWKEE 308


>ref|XP_002876454.1| seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297322292|gb|EFH52713.1| seven in absentia family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  530 bits (1364), Expect = e-148
 Identities = 243/309 (78%), Positives = 277/309 (89%), Gaps = 3/309 (0%)
 Frame = +3

Query: 96   MAPGG-VCKEVVDSHNKYVKYDVVMAKAE--KSNAPVKTGIGSGDKHGMPSTNGVHELLE 266
            MAPGG   KEV++S++  + Y+V  AK E   +N P K G     K+G+ S NGV+ELLE
Sbjct: 1    MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNNKPTKPGSAGIGKYGIHSNNGVYELLE 60

Query: 267  CAVCTSLMYPPIYQCPNGHTLCSDCKIRVHNCCPTCRLELGNIRCLALEKVAESLELPCK 446
            C VCT+LMYPPI+QCPNGHTLCS+CK+RV N CPTCR ELGNIRCLALEKVAESLE+PC+
Sbjct: 61   CPVCTNLMYPPIHQCPNGHTLCSNCKVRVQNTCPTCRYELGNIRCLALEKVAESLEVPCR 120

Query: 447  YRSLGCDDIFPYYSKLKHEQHCRFRPYSCPYAGSECSISSDIPTLVTHLKDDHNVDMHDG 626
            Y++LGC DIFPYYSKLKHEQHCRFRPY+CPYAGSEC+++ DIPTLV HLKDDH VDMHDG
Sbjct: 121  YQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECAVTGDIPTLVVHLKDDHKVDMHDG 180

Query: 627  CTFNHRYVKANPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEA 806
            CTFNHRYVK+NPHEVENATWMLTVFNC+GRQFCLHFEAFQLGMAPVY++FLRFMG+++EA
Sbjct: 181  CTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEA 240

Query: 807  KKFSYSLEVGGYGRKLTWQGVPRSIRDSHRKVRDSLDGLIIPRNLALFFSGGDREELKLR 986
            KKFSYSLEVG +GRKLTWQG+PRSIRDSHRKVRDS DGLIIPRNLAL+FSGGDR+ELKLR
Sbjct: 241  KKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLR 300

Query: 987  VTGRIWKEQ 1013
            VTGRIWKE+
Sbjct: 301  VTGRIWKEE 309


>ref|XP_002323331.1| predicted protein [Populus trichocarpa] gi|222867961|gb|EEF05092.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  527 bits (1358), Expect = e-147
 Identities = 243/307 (79%), Positives = 271/307 (88%), Gaps = 1/307 (0%)
 Frame = +3

Query: 96   MAPGGVC-KEVVDSHNKYVKYDVVMAKAEKSNAPVKTGIGSGDKHGMPSTNGVHELLECA 272
            MAPGG   KEV++      + D+  +K+E + AP K  +    KHG+ S NGVHELLEC 
Sbjct: 1    MAPGGSAFKEVLEL---VAECDIATSKSENNIAPTKGTVVLSGKHGVYSNNGVHELLECP 57

Query: 273  VCTSLMYPPIYQCPNGHTLCSDCKIRVHNCCPTCRLELGNIRCLALEKVAESLELPCKYR 452
            VCT+LMYPPI+QCPNGHTLCS CK+RVHNCCPTCR +LGNIRCLALEKVAESLELPCKY+
Sbjct: 58   VCTNLMYPPIHQCPNGHTLCSACKLRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQ 117

Query: 453  SLGCDDIFPYYSKLKHEQHCRFRPYSCPYAGSECSISSDIPTLVTHLKDDHNVDMHDGCT 632
            SLGC D+FPYYSKLKHEQHCRFRPYSCPYAGSECS++ DIP L  HLKDDH VDMHDGCT
Sbjct: 118  SLGCLDVFPYYSKLKHEQHCRFRPYSCPYAGSECSVTGDIPALAAHLKDDHKVDMHDGCT 177

Query: 633  FNHRYVKANPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEAKK 812
            FNHRYVK+NPHEVENATWMLTVFNC+GRQFCLHFEAFQLGMAPVY++FLRFMG+D+EAKK
Sbjct: 178  FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 237

Query: 813  FSYSLEVGGYGRKLTWQGVPRSIRDSHRKVRDSLDGLIIPRNLALFFSGGDREELKLRVT 992
            FSYSLEVGG GRKL WQG+PRSIRDSHRKVRDS DGLII RNLAL+FSGGDR+ELKLRVT
Sbjct: 238  FSYSLEVGGNGRKLVWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRKELKLRVT 297

Query: 993  GRIWKEQ 1013
            GR+WKE+
Sbjct: 298  GRVWKEE 304


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