BLASTX nr result

ID: Cnidium21_contig00024062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024062
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526718.1| nucleic acid binding protein, putative [Rici...   175   2e-41
gb|ADE74631.1| unknown [Vitis vinifera]                               174   4e-41
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   173   1e-40
ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [...   167   8e-39

>ref|XP_002526718.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533907|gb|EEF35632.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 728

 Score =  175 bits (444), Expect = 2e-41
 Identities = 84/122 (68%), Positives = 102/122 (83%)
 Frame = +2

Query: 1079 DMSPLSVETEDSFSSLLEFAANNECEAFKTLVEKNPLAIDEVGLWYVRKKGSKQIVLEHR 1258
            DM+ L+VETED+F+SLLE AANN+ E FK  +E++P  +DE+GLWY R+KGSKQ+V EHR
Sbjct: 30   DMNHLTVETEDTFASLLELAANNDIEGFKRTIERDPSCVDEIGLWYGRRKGSKQMVNEHR 89

Query: 1259 TPLMVAATYGSLDVIKFIISQPAVNVNLACGPDKCTALHCAASGGAVNAVDIVRLLLAVG 1438
            TPLMVAATYGS+DVIK I+S    +VN +CG DK TALHC ASGGAVNAVD+V+LLLA G
Sbjct: 90   TPLMVAATYGSIDVIKLILSSSDADVNRSCGLDKSTALHCVASGGAVNAVDVVKLLLAAG 149

Query: 1439 AD 1444
            AD
Sbjct: 150  AD 151


>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  174 bits (442), Expect = 4e-41
 Identities = 84/125 (67%), Positives = 107/125 (85%)
 Frame = +2

Query: 1070 NKQDMSPLSVETEDSFSSLLEFAANNECEAFKTLVEKNPLAIDEVGLWYVRKKGSKQIVL 1249
            N  DM+ L+VETEDSFSSL E AANN+ + FK  +E++  AI+EVGLWY R+KGSKQ+VL
Sbjct: 24   NTIDMNHLTVETEDSFSSLHELAANNDVDGFKRSLERDASAINEVGLWYGRQKGSKQMVL 83

Query: 1250 EHRTPLMVAATYGSLDVIKFIISQPAVNVNLACGPDKCTALHCAASGGAVNAVDIVRLLL 1429
            EHRTP+MVAATYGS++V+K I+S+   +VN++CGPDK TALHCAASGG+VNAVD+V+LLL
Sbjct: 84   EHRTPMMVAATYGSVEVLKLILSRSDADVNISCGPDKSTALHCAASGGSVNAVDVVKLLL 143

Query: 1430 AVGAD 1444
            + GAD
Sbjct: 144  SAGAD 148


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
            vinifera]
          Length = 740

 Score =  173 bits (438), Expect = 1e-40
 Identities = 83/125 (66%), Positives = 107/125 (85%)
 Frame = +2

Query: 1070 NKQDMSPLSVETEDSFSSLLEFAANNECEAFKTLVEKNPLAIDEVGLWYVRKKGSKQIVL 1249
            N  DM+ L+VETEDSFSSL E AANN+ + FK  +E++  AI+EVGLWY R+KGSKQ+VL
Sbjct: 24   NTIDMNHLTVETEDSFSSLHELAANNDVDGFKRSLERDASAINEVGLWYGRQKGSKQMVL 83

Query: 1250 EHRTPLMVAATYGSLDVIKFIISQPAVNVNLACGPDKCTALHCAASGGAVNAVDIVRLLL 1429
            +HRTP+MVAATYGS++V+K I+S+   +VN++CGPDK TALHCAASGG+VNAVD+V+LLL
Sbjct: 84   KHRTPMMVAATYGSVEVLKLILSRSDADVNISCGPDKSTALHCAASGGSVNAVDVVKLLL 143

Query: 1430 AVGAD 1444
            + GAD
Sbjct: 144  SAGAD 148


>ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|222854014|gb|EEE91561.1|
            predicted protein [Populus trichocarpa]
          Length = 735

 Score =  169 bits (429), Expect = 1e-39
 Identities = 83/121 (68%), Positives = 102/121 (84%)
 Frame = +2

Query: 1082 MSPLSVETEDSFSSLLEFAANNECEAFKTLVEKNPLAIDEVGLWYVRKKGSKQIVLEHRT 1261
            M+ L+VETED+F+SLLE AANN+ E FK  +E++   +DE+GLWY RKKGSKQ+V EHRT
Sbjct: 31   MNHLTVETEDTFASLLELAANNDVEGFKQSIERDLSCVDEIGLWYGRKKGSKQMVNEHRT 90

Query: 1262 PLMVAATYGSLDVIKFIISQPAVNVNLACGPDKCTALHCAASGGAVNAVDIVRLLLAVGA 1441
            PLMVA+TYGS+DVIK I+S   V+VN +CG +K TALHCAASGGAVNAVD+V+LLLA GA
Sbjct: 91   PLMVASTYGSIDVIKVILSLSYVDVNRSCGVEKSTALHCAASGGAVNAVDVVKLLLAAGA 150

Query: 1442 D 1444
            D
Sbjct: 151  D 151


>ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type
            [Medicago truncatula] gi|355500172|gb|AES81375.1| Zinc
            finger CCCH domain-containing protein [Medicago
            truncatula]
          Length = 734

 Score =  167 bits (422), Expect = 8e-39
 Identities = 82/121 (67%), Positives = 99/121 (81%)
 Frame = +2

Query: 1082 MSPLSVETEDSFSSLLEFAANNECEAFKTLVEKNPLAIDEVGLWYVRKKGSKQIVLEHRT 1261
            M+ L++ TEDSF+SLLE AANN+ E FK L+E +P+++DEVGLWY R+KGSKQ+V E RT
Sbjct: 33   MNHLTISTEDSFASLLELAANNDVEGFKRLIEYDPMSVDEVGLWYGRRKGSKQMVNEQRT 92

Query: 1262 PLMVAATYGSLDVIKFIISQPAVNVNLACGPDKCTALHCAASGGAVNAVDIVRLLLAVGA 1441
            PLMVAATYGS+DV+K I S   V++N  CG DK TALHCAASGGA NAVD V+LLLA GA
Sbjct: 93   PLMVAATYGSIDVMKLIFSLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGA 152

Query: 1442 D 1444
            D
Sbjct: 153  D 153


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