BLASTX nr result
ID: Cnidium21_contig00024057
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00024057
(1850 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy... 729 0.0
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2... 714 0.0
ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy... 687 0.0
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas... 687 0.0
ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferas... 679 0.0
>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
product [Vitis vinifera]
Length = 525
Score = 729 bits (1881), Expect = 0.0
Identities = 366/462 (79%), Positives = 403/462 (87%)
Frame = -3
Query: 1404 VSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXXXXXXXDIVGGT 1225
VSAVRLMRIE GGAFADLLNE+GKGSGDNEMGYVERTLGF DIVGG+
Sbjct: 62 VSAVRLMRIELGGAFADLLNERGKGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGS 121
Query: 1224 IRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPYAVVHENVGLAKVA 1045
IRWRRYLD+LI+SLCHD+KTF MEPLLLQILRIGFYEI+ L+MPPYAVV ENV LAKVA
Sbjct: 122 IRWRRYLDHLIVSLCHDSKTFRSMEPLLLQILRIGFYEIVNLDMPPYAVVDENVRLAKVA 181
Query: 1044 LRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILYSHPVWMVRRWTKHFG 865
LRPGAGNMVN ILRKL+LLKE NSLP PKLEG+DR QARALA LYSHPVWMVRRWTK+ G
Sbjct: 182 LRPGAGNMVNAILRKLVLLKEKNSLPLPKLEGDDRAQARALATLYSHPVWMVRRWTKYLG 241
Query: 864 QDKAITLMTWNNNHPSFSLRANSAKGFTRTDLEFQLKMLKVPHELSPNLSHFVRIKTGLQ 685
Q++AI LM WNN+ PSFSLRANS KGFTR DL +LKMLKVPHELSP+L +FVRI+TG+Q
Sbjct: 242 QEEAIKLMMWNNSEPSFSLRANSGKGFTRADLVMRLKMLKVPHELSPHLDNFVRIRTGMQ 301
Query: 684 AVIQAGLLKEGLCSVQDESAGLVVSVLDPHPGESIIDCCAAPGGKTLFIASLMSGQGMLS 505
VIQA LLKEGLCSVQDESAGLVVSV+DP PGESIIDCCAAPGGKT+F+AS +SGQGM+
Sbjct: 302 IVIQAQLLKEGLCSVQDESAGLVVSVVDPQPGESIIDCCAAPGGKTIFMASCLSGQGMVH 361
Query: 504 AIDINEGRLRILAETAKLQQVDNVITTIHADLCVFAADSHVSFDKVLLDAPCSGLGVLSK 325
AIDIN+GRLRI+ ETAKL VD+VITT+HADLC FA ++ V DKVLLDAPCSGLGVLSK
Sbjct: 362 AIDINKGRLRIVKETAKLLLVDDVITTVHADLCTFAKNNPVKSDKVLLDAPCSGLGVLSK 421
Query: 324 RADLRWNRKLEDMEELKSLQDRLLDAASILVKPGGVLVYSTCSFDPEENEERVTSFLLRH 145
RADLRWNR LEDME+LK+LQD LLDAA+ILVKPGGVLVYSTCS DPEENEERV +FL RH
Sbjct: 422 RADLRWNRSLEDMEQLKNLQDELLDAAAILVKPGGVLVYSTCSIDPEENEERVAAFLQRH 481
Query: 144 TEFCIDSVKKYVPPEFVTEKGFYFSSPVKHCLDGAFAARLLR 19
EF ID V +YVP +FVTE GFYFS+PVKH LDGAFAARL+R
Sbjct: 482 PEFSIDPVGRYVPSDFVTEGGFYFSNPVKHALDGAFAARLVR 523
>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
predicted protein [Populus trichocarpa]
Length = 527
Score = 714 bits (1842), Expect = 0.0
Identities = 362/462 (78%), Positives = 395/462 (85%)
Frame = -3
Query: 1404 VSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXXXXXXXDIVGGT 1225
VSAVRLMRIE GGAFADLLN+KGKGSGDNEMGYVERTLGF DIVGGT
Sbjct: 64 VSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGT 123
Query: 1224 IRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPYAVVHENVGLAKVA 1045
IRWRRYLDYLI SLCHD K F MEPLLLQILRIGFYEI+KL+MP YAVV ENV LAKV+
Sbjct: 124 IRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVRLAKVS 183
Query: 1044 LRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILYSHPVWMVRRWTKHFG 865
LRPGAGNMVNGILRKL+LLKESNSLP PKLEG+DR QARALA LYSHPVWMVRRWTK G
Sbjct: 184 LRPGAGNMVNGILRKLVLLKESNSLPLPKLEGDDRAQARALATLYSHPVWMVRRWTKLLG 243
Query: 864 QDKAITLMTWNNNHPSFSLRANSAKGFTRTDLEFQLKMLKVPHELSPNLSHFVRIKTGLQ 685
Q+KAI LM WNN++PSFSLRANS KG TR DL Q MLKVPHELS +L HFVR+KTGLQ
Sbjct: 244 QEKAIKLMMWNNDNPSFSLRANSGKGVTRADLVMQFNMLKVPHELSLHLDHFVRVKTGLQ 303
Query: 684 AVIQAGLLKEGLCSVQDESAGLVVSVLDPHPGESIIDCCAAPGGKTLFIASLMSGQGMLS 505
VIQAGLLK+GLC+VQDESAGL+VSV++P PG+SIIDCCAAPGGKTL++AS M GQGML
Sbjct: 304 IVIQAGLLKQGLCAVQDESAGLIVSVVNPQPGDSIIDCCAAPGGKTLYMASQMHGQGMLY 363
Query: 504 AIDINEGRLRILAETAKLQQVDNVITTIHADLCVFAADSHVSFDKVLLDAPCSGLGVLSK 325
AIDIN+GRLRI+ ETAKL QVD VITTI +DL FA + DKVLLDAPCSGLGVLSK
Sbjct: 364 AIDINKGRLRIVKETAKLHQVDGVITTIPSDLRTFAESYQLKSDKVLLDAPCSGLGVLSK 423
Query: 324 RADLRWNRKLEDMEELKSLQDRLLDAASILVKPGGVLVYSTCSFDPEENEERVTSFLLRH 145
RADLRWNR+LED+EELK LQ+ LLDAASILVKPGGVLVYSTCS DPEENEERV +FLLRH
Sbjct: 424 RADLRWNRRLEDLEELKKLQEELLDAASILVKPGGVLVYSTCSIDPEENEERVDAFLLRH 483
Query: 144 TEFCIDSVKKYVPPEFVTEKGFYFSSPVKHCLDGAFAARLLR 19
EF ID V +YVPP+FVT++GFY S PVKH +DGAFAARL+R
Sbjct: 484 PEFRIDPVDRYVPPDFVTKRGFYSSDPVKHSMDGAFAARLIR 525
>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
[Glycine max]
Length = 528
Score = 687 bits (1773), Expect = 0.0
Identities = 347/462 (75%), Positives = 388/462 (83%)
Frame = -3
Query: 1404 VSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXXXXXXXDIVGGT 1225
VSAVRLMRIE GGAFADLLNEKGKGSG+NEMGYV+RTLGF DIVGGT
Sbjct: 66 VSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHDLRLVTDIVGGT 125
Query: 1224 IRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPYAVVHENVGLAKVA 1045
IRWRRYLD+LI SLCHD K S MEPLLLQILRIGFYEI+KL+MPPYAVV ENV LAK A
Sbjct: 126 IRWRRYLDHLISSLCHD-KDISSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVKLAKFA 184
Query: 1044 LRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILYSHPVWMVRRWTKHFG 865
LRPGAGNMVNGILRKL++LKE SLP PK+EG+DR QARALA LYSHPVWMVRRWTK+ G
Sbjct: 185 LRPGAGNMVNGILRKLVVLKEKESLPLPKVEGDDRAQARALATLYSHPVWMVRRWTKYLG 244
Query: 864 QDKAITLMTWNNNHPSFSLRANSAKGFTRTDLEFQLKMLKVPHELSPNLSHFVRIKTGLQ 685
Q++AI LM WNN+ PSFSLRAN A+GF+R DL QL LKVPH+LSP+L FVRIKTGLQ
Sbjct: 245 QEEAIKLMIWNNSEPSFSLRANRARGFSRDDLVTQLNALKVPHKLSPHLDEFVRIKTGLQ 304
Query: 684 AVIQAGLLKEGLCSVQDESAGLVVSVLDPHPGESIIDCCAAPGGKTLFIASLMSGQGMLS 505
+IQAGLLK+GLCSVQDESAGLVVSV+DP PGE+IIDCCAAPGGKTL++AS +SGQG +
Sbjct: 305 IIIQAGLLKKGLCSVQDESAGLVVSVVDPQPGETIIDCCAAPGGKTLYMASHLSGQGKVF 364
Query: 504 AIDINEGRLRILAETAKLQQVDNVITTIHADLCVFAADSHVSFDKVLLDAPCSGLGVLSK 325
AID+N GRLRIL ETAKL QVD VIT IHADL + +KVLLDAPCSGLGVLSK
Sbjct: 365 AIDVNSGRLRILKETAKLHQVDGVITAIHADLRTLPDSGQLKSNKVLLDAPCSGLGVLSK 424
Query: 324 RADLRWNRKLEDMEELKSLQDRLLDAASILVKPGGVLVYSTCSFDPEENEERVTSFLLRH 145
RADLRWN+ LEDME+LK LQD LLDAAS LVKPGGVLVYSTCS DPEEN++RV +FL RH
Sbjct: 425 RADLRWNKNLEDMEQLKELQDELLDAASKLVKPGGVLVYSTCSIDPEENDDRVVAFLARH 484
Query: 144 TEFCIDSVKKYVPPEFVTEKGFYFSSPVKHCLDGAFAARLLR 19
++F ID V +YVPP+F T GF+FS+PVKH LDG+FAARL+R
Sbjct: 485 SDFHIDPVDRYVPPDFETSSGFFFSNPVKHSLDGSFAARLVR 526
>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
communis] gi|223538010|gb|EEF39623.1| ribosomal RNA small
subunit methyltransferase B, putative [Ricinus communis]
Length = 527
Score = 687 bits (1773), Expect = 0.0
Identities = 346/462 (74%), Positives = 391/462 (84%)
Frame = -3
Query: 1404 VSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXXXXXXXDIVGGT 1225
VSAVRLMRIE GGAFADLLNEKGKGSG+NEMGYVERTLGF D+VGGT
Sbjct: 64 VSAVRLMRIEMGGAFADLLNEKGKGSGENEMGYVERTLGFRTKNLDDRDLRLVTDVVGGT 123
Query: 1224 IRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPYAVVHENVGLAKVA 1045
IRWRR+LD+LI SL HD TF MEPLLLQILRIG YEI+KL+MPPYAVV ENV LAKVA
Sbjct: 124 IRWRRFLDHLICSLFHDENTFRSMEPLLLQILRIGAYEIVKLDMPPYAVVDENVRLAKVA 183
Query: 1044 LRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILYSHPVWMVRRWTKHFG 865
LRPGAGNMVNGILRKL+LLKE+NSLP PKLEG+ R QARALA L+SHPVWMVRRWTK+ G
Sbjct: 184 LRPGAGNMVNGILRKLVLLKENNSLPLPKLEGDARAQARALATLHSHPVWMVRRWTKYLG 243
Query: 864 QDKAITLMTWNNNHPSFSLRANSAKGFTRTDLEFQLKMLKVPHELSPNLSHFVRIKTGLQ 685
Q++AI LM WNN+ PSFSLRAN KG TR DL +L +LKVP+ELSP HFVR++TGLQ
Sbjct: 244 QEEAIRLMIWNNSDPSFSLRANGGKGVTRDDLVTRLNLLKVPYELSPYSDHFVRMRTGLQ 303
Query: 684 AVIQAGLLKEGLCSVQDESAGLVVSVLDPHPGESIIDCCAAPGGKTLFIASLMSGQGMLS 505
V+QAGLLKEG CSVQDESAGLVVS+++P PG+SIIDCCAAPGGKT+++ASLM GQGM+
Sbjct: 304 IVLQAGLLKEGFCSVQDESAGLVVSIVNPQPGDSIIDCCAAPGGKTVYMASLMEGQGMVY 363
Query: 504 AIDINEGRLRILAETAKLQQVDNVITTIHADLCVFAADSHVSFDKVLLDAPCSGLGVLSK 325
AIDIN+GRLRIL ETAKL Q+D VIT + +DL V A + + DKVLLDAPCSGLGVLSK
Sbjct: 364 AIDINKGRLRILQETAKLHQIDGVITAVPSDLRVLAENYPMKSDKVLLDAPCSGLGVLSK 423
Query: 324 RADLRWNRKLEDMEELKSLQDRLLDAASILVKPGGVLVYSTCSFDPEENEERVTSFLLRH 145
RADLRWNR++ED+EELK+LQD LLDAAS LVKPGG LVYSTCS DPEENEERV +FLLRH
Sbjct: 424 RADLRWNRRVEDLEELKNLQDELLDAASTLVKPGGFLVYSTCSIDPEENEERVDAFLLRH 483
Query: 144 TEFCIDSVKKYVPPEFVTEKGFYFSSPVKHCLDGAFAARLLR 19
EF ID V +YVPP+ VTE+GFY SSPVKH +DGAFAARL++
Sbjct: 484 PEFQIDPVDRYVPPDLVTERGFYSSSPVKHSIDGAFAARLVK 525
>ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferase [Medicago truncatula]
gi|355519174|gb|AET00798.1| Ribosomal RNA small subunit
methyltransferase [Medicago truncatula]
Length = 654
Score = 679 bits (1751), Expect = 0.0
Identities = 338/460 (73%), Positives = 386/460 (83%)
Frame = -3
Query: 1404 VSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXXXXXXXDIVGGT 1225
VSAVRLMRIE GGAFADLLNEKGKGSG+NEMGYV+RTLGF +IVGGT
Sbjct: 67 VSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNNQDLRLVTEIVGGT 126
Query: 1224 IRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPYAVVHENVGLAKVA 1045
IRWRRYLD+LI SLCHD K S MEPLLLQILRIGFYEI+KL+MPPYAVV ENV LAK A
Sbjct: 127 IRWRRYLDHLISSLCHD-KDISSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVQLAKAA 185
Query: 1044 LRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILYSHPVWMVRRWTKHFG 865
LRPGAGNMVNG+LRKL++LKE+ +LP PK+EG+DR QARALA LYSHPVW+VRRWTK+ G
Sbjct: 186 LRPGAGNMVNGVLRKLVVLKENETLPLPKVEGDDRSQARALATLYSHPVWIVRRWTKYLG 245
Query: 864 QDKAITLMTWNNNHPSFSLRANSAKGFTRTDLEFQLKMLKVPHELSPNLSHFVRIKTGLQ 685
Q++AI LM WNN PS+SLRAN AKGF+R DL +L LKVPH+LS +L FVRIKTGLQ
Sbjct: 246 QEEAIKLMIWNNIEPSYSLRANRAKGFSRDDLVTELNALKVPHKLSLHLDDFVRIKTGLQ 305
Query: 684 AVIQAGLLKEGLCSVQDESAGLVVSVLDPHPGESIIDCCAAPGGKTLFIASLMSGQGMLS 505
+I AGL KEGLCSVQDESAGL+VS++DP PGE+I+DCCAAPGGKTL++A+ +SGQGM+
Sbjct: 306 IIIHAGLFKEGLCSVQDESAGLIVSIVDPQPGETIVDCCAAPGGKTLYMAAHLSGQGMVY 365
Query: 504 AIDINEGRLRILAETAKLQQVDNVITTIHADLCVFAADSHVSFDKVLLDAPCSGLGVLSK 325
A+D+N GRLRIL ETAKL QVD V+TT+HADL + +KVLLDAPCSGLGVLSK
Sbjct: 366 AVDVNSGRLRILKETAKLHQVDGVVTTVHADLRTLTDGEPLKSNKVLLDAPCSGLGVLSK 425
Query: 324 RADLRWNRKLEDMEELKSLQDRLLDAASILVKPGGVLVYSTCSFDPEENEERVTSFLLRH 145
RADLRWNRKLEDME+LK LQD LLDAAS LVKPGGVLVYSTCS DPEEN++RV +FL RH
Sbjct: 426 RADLRWNRKLEDMEQLKKLQDELLDAASTLVKPGGVLVYSTCSIDPEENDDRVAAFLERH 485
Query: 144 TEFCIDSVKKYVPPEFVTEKGFYFSSPVKHCLDGAFAARL 25
+F ID V +YVPP+FVT KGFY S+PVKH LDG+FAARL
Sbjct: 486 ADFHIDPVDRYVPPDFVTPKGFYSSNPVKHSLDGSFAARL 525