BLASTX nr result

ID: Cnidium21_contig00024031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024031
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521103.1| WD-repeat protein, putative [Ricinus communi...   103   5e-43
emb|CAF18246.1| STY-L protein [Antirrhinum majus]                     104   3e-42
ref|XP_002266172.1| PREDICTED: transcriptional corepressor LEUNI...    99   2e-39
emb|CAN73936.1| hypothetical protein VITISV_026282 [Vitis vinifera]    99   2e-39
ref|XP_002301780.1| predicted protein [Populus trichocarpa] gi|2...    92   8e-37

>ref|XP_002521103.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539672|gb|EEF41254.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 766

 Score =  103 bits (258), Expect(2) = 5e-43
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = +3

Query: 99  HSSSGPANSTGTGNTVGPSPNSPPSTHTAGDGITTASSLQHVNSGHKGLMMYG 257
           HSSSGPANSTGTGNTVGPSP+SPPSTHT GDGITTASS+QHVNS  KGLMMYG
Sbjct: 380 HSSSGPANSTGTGNTVGPSPSSPPSTHTPGDGITTASSMQHVNSASKGLMMYG 432



 Score = 95.9 bits (237), Expect(2) = 5e-43
 Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 5/69 (7%)
 Frame = +1

Query: 334 MEHFGDVG----DVESFLSNDGEDGRSLYGTIKQNLTEHKTESSKGFSFGEVGCIRTRN- 498
           M+ FGD+     ++E FLS+DG DGR LYGT+KQ+ ++H+ ES+KGF+FGEVGCIRTRN 
Sbjct: 449 MDRFGDIASLDDNMEQFLSHDGGDGRDLYGTLKQSSSDHQKESTKGFTFGEVGCIRTRNS 508

Query: 499 KVTCCHFSS 525
           KVTCCHFSS
Sbjct: 509 KVTCCHFSS 517


>emb|CAF18246.1| STY-L protein [Antirrhinum majus]
          Length = 777

 Score =  104 bits (259), Expect(2) = 3e-42
 Identities = 51/68 (75%), Positives = 60/68 (88%), Gaps = 4/68 (5%)
 Frame = +1

Query: 334 MEHFGDVG----DVESFLSNDGEDGRSLYGTIKQNLTEHKTESSKGFSFGEVGCIRTRNK 501
           +E+FGDVG    +VESFLS+DG+   +LYG++KQ LTEHKTE+SKGFSFGEVGCIRTRNK
Sbjct: 444 LENFGDVGSLEDNVESFLSHDGDG--NLYGSLKQTLTEHKTETSKGFSFGEVGCIRTRNK 501

Query: 502 VTCCHFSS 525
           VTCCHFSS
Sbjct: 502 VTCCHFSS 509



 Score = 92.8 bits (229), Expect(2) = 3e-42
 Identities = 43/53 (81%), Positives = 46/53 (86%)
 Frame = +3

Query: 99  HSSSGPANSTGTGNTVGPSPNSPPSTHTAGDGITTASSLQHVNSGHKGLMMYG 257
           HSSSGPANSTGTGNTVGPSP +P STHT GDG+ TASSLQHVNS  K +MMYG
Sbjct: 375 HSSSGPANSTGTGNTVGPSPGTPQSTHTPGDGMATASSLQHVNSVSKSMMMYG 427


>ref|XP_002266172.1| PREDICTED: transcriptional corepressor LEUNIG [Vitis vinifera]
           gi|297744346|emb|CBI37316.3| unnamed protein product
           [Vitis vinifera]
          Length = 779

 Score = 99.4 bits (246), Expect(2) = 2e-39
 Identities = 47/53 (88%), Positives = 48/53 (90%)
 Frame = +3

Query: 99  HSSSGPANSTGTGNTVGPSPNSPPSTHTAGDGITTASSLQHVNSGHKGLMMYG 257
           HSSSGPANSTGTGNTVGPSPNSPPSTHT GDG+T ASSLQHVNS  K LMMYG
Sbjct: 380 HSSSGPANSTGTGNTVGPSPNSPPSTHTPGDGMTMASSLQHVNSVPKSLMMYG 432



 Score = 88.6 bits (218), Expect(2) = 2e-39
 Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 5/69 (7%)
 Frame = +1

Query: 334 MEHFGDVG----DVESFLSNDGEDGRSLYGTIKQNLTEHKTESSKGFSFGEVGCIRTRN- 498
           MEHFGD+G    +VESFLS+DG DGR LYGT     TE K ESSKGF+F EVGC+R  N 
Sbjct: 449 MEHFGDIGSLDDNVESFLSHDGGDGRDLYGT-----TELKKESSKGFTFAEVGCLRASNG 503

Query: 499 KVTCCHFSS 525
           KVTCCHFSS
Sbjct: 504 KVTCCHFSS 512


>emb|CAN73936.1| hypothetical protein VITISV_026282 [Vitis vinifera]
          Length = 774

 Score = 99.4 bits (246), Expect(2) = 2e-39
 Identities = 47/53 (88%), Positives = 48/53 (90%)
 Frame = +3

Query: 99  HSSSGPANSTGTGNTVGPSPNSPPSTHTAGDGITTASSLQHVNSGHKGLMMYG 257
           HSSSGPANSTGTGNTVGPSPNSPPSTHT GDG+T ASSLQHVNS  K LMMYG
Sbjct: 375 HSSSGPANSTGTGNTVGPSPNSPPSTHTPGDGMTMASSLQHVNSVPKSLMMYG 427



 Score = 88.6 bits (218), Expect(2) = 2e-39
 Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 5/69 (7%)
 Frame = +1

Query: 334 MEHFGDVG----DVESFLSNDGEDGRSLYGTIKQNLTEHKTESSKGFSFGEVGCIRTRN- 498
           MEHFGD+G    +VESFLS+DG DGR LYGT     TE K ESSKGF+F EVGC+R  N 
Sbjct: 444 MEHFGDIGSLDDNVESFLSHDGGDGRDLYGT-----TELKKESSKGFTFAEVGCLRASNG 498

Query: 499 KVTCCHFSS 525
           KVTCCHFSS
Sbjct: 499 KVTCCHFSS 507


>ref|XP_002301780.1| predicted protein [Populus trichocarpa] gi|222843506|gb|EEE81053.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score = 91.7 bits (226), Expect(2) = 8e-37
 Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 5/69 (7%)
 Frame = +1

Query: 334 MEHFGDVG----DVESFLSNDGEDGRSLYGTIKQNLTEHKTESSKGFSFGEVGCIRTRN- 498
           M+ FGD+      +E FL+ DG DGR LYGT+KQ+L+E++ ESSKGF+FGEVGCIRTRN 
Sbjct: 443 MDRFGDIAALDDSMEQFLAPDG-DGRDLYGTVKQSLSENQKESSKGFTFGEVGCIRTRNS 501

Query: 499 KVTCCHFSS 525
           KVTCCHFSS
Sbjct: 502 KVTCCHFSS 510



 Score = 87.4 bits (215), Expect(2) = 8e-37
 Identities = 41/53 (77%), Positives = 42/53 (79%)
 Frame = +3

Query: 99  HSSSGPANSTGTGNTVGPSPNSPPSTHTAGDGITTASSLQHVNSGHKGLMMYG 257
           HSSSGPANST TGNT GPSPNSPPSTHT GDG+ T SS QH  S  K LMMYG
Sbjct: 374 HSSSGPANSTCTGNTAGPSPNSPPSTHTPGDGMRTTSSFQHAKSVPKSLMMYG 426


Top