BLASTX nr result

ID: Cnidium21_contig00024020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024020
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    55   8e-06

>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2    NLSNNPIRILPDCFNCLKRIETFVLMDCNWLQALEDLP-DIKEIQVLNCPLLAKITFKRG 178
            NLS N I  LP   + L ++E+ VL +C  LQ+L +LP  ++E+   NC  L +IT    
Sbjct: 838  NLSGNSISCLPKTISGLTKLESLVLDNCRSLQSLSELPASLRELNAENCTSLERITNLPN 897

Query: 179  PVWNSICYPSRCEKLIEMESVFKVVPI 259
             + +     + CE+L+E++  FK+ PI
Sbjct: 898  LMTSLRLNLAGCEQLVEVQGFFKLEPI 924


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