BLASTX nr result
ID: Cnidium21_contig00024011
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00024011 (588 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003601293.1| Pentatricopeptide repeat-containing protein,... 232 3e-59 ref|XP_002511467.1| pentatricopeptide repeat-containing protein,... 231 5e-59 ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi... 228 4e-58 ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi... 224 8e-57 emb|CBI15095.3| unnamed protein product [Vitis vinifera] 224 8e-57 >ref|XP_003601293.1| Pentatricopeptide repeat-containing protein, partial [Medicago truncatula] gi|355490341|gb|AES71544.1| Pentatricopeptide repeat-containing protein, partial [Medicago truncatula] Length = 317 Score = 232 bits (592), Expect = 3e-59 Identities = 111/195 (56%), Positives = 135/195 (69%) Frame = +3 Query: 3 PQDITITNLILNTDSKALPQTLEAHNIDWTQDLVHKTLKRLWNHGPKALEFFNILDRHLS 182 P D T+ L+L +D K L QTL WT LV LKRLWNHGPKAL+FF LDRH + Sbjct: 36 PIDATVAKLVLESDPKTLSQTLSNPTFQWTPLLVDNILKRLWNHGPKALQFFKHLDRHPT 95 Query: 183 YTHSXXXXXXXXXXXXRLREYKTLWTLMTRMKTRQLGPSPKTFAIVIERLVAAGKPDRAV 362 Y HS RLREY T W LM RM+ +LGP+PKTFAI+ ER GK +AV Sbjct: 96 YIHSISSFEHAVDIAARLREYNTAWALMGRMRALRLGPTPKTFAILAERYATGGKAHKAV 155 Query: 363 KVFLSMHEHGVIQNLNCFNMFLDVLCKSRRVEMAYNLFKVFRGRFRVDTITYNVLVNGFC 542 KVFLSMHEHG Q+LN FN LDVLCK++RVEMA NLFK RGRF+ D+++YN++ NG+C Sbjct: 156 KVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMANNLFKTLRGRFKCDSVSYNIMANGWC 215 Query: 543 LIKRTPRGLEIMREM 587 LIKRTP L++++EM Sbjct: 216 LIKRTPMALQVLKEM 230 >ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 482 Score = 231 bits (590), Expect = 5e-59 Identities = 109/196 (55%), Positives = 145/196 (73%), Gaps = 1/196 (0%) Frame = +3 Query: 3 PQDITITNLILN-TDSKALPQTLEAHNIDWTQDLVHKTLKRLWNHGPKALEFFNILDRHL 179 P+ T+ LILN T+S+ L ++L + +I WT LV+ LKRLWNHGPKAL FF IL H Sbjct: 27 PEATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHP 86 Query: 180 SYTHSXXXXXXXXXXXXRLREYKTLWTLMTRMKTRQLGPSPKTFAIVIERLVAAGKPDRA 359 SY H RLR+++TLW L++RM++ +LGPSP+TFAI+ ER A GKP RA Sbjct: 87 SYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRA 146 Query: 360 VKVFLSMHEHGVIQNLNCFNMFLDVLCKSRRVEMAYNLFKVFRGRFRVDTITYNVLVNGF 539 V VF+SMHE+G Q+L+ FN LDVLCKS+RVEMAYNLFK +G+F+ D ++YN++VNG+ Sbjct: 147 VTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGW 206 Query: 540 CLIKRTPRGLEIMREM 587 CLIKRTP+ LE+++EM Sbjct: 207 CLIKRTPKALEMLKEM 222 Score = 63.9 bits (154), Expect = 2e-08 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 3/153 (1%) Frame = +3 Query: 138 PKALEFFN-ILDRHLSYTHSXXXXXXXXXXXXRLREYKTLWTLMTRMKTRQLGPSPKTFA 314 PKALE +++R L T + R + W MK R+ T+ Sbjct: 213 PKALEMLKEMVERGL--TPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYT 270 Query: 315 IVIERLVAAGKPDRAVKVFLSMHEHGVIQNLNCFNMFLDVLCKSRRVEMAYNLFK--VFR 488 VI L G+ RA VF M + GV+ ++ FN + +LCK VE A +F+ V R Sbjct: 271 SVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKR 330 Query: 489 GRFRVDTITYNVLVNGFCLIKRTPRGLEIMREM 587 G + ++ITYN+++ G C + R +E+M M Sbjct: 331 G-YVPNSITYNLVIRGLCHVGEMQRAMELMERM 362 >ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial-like [Cucumis sativus] gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial-like [Cucumis sativus] Length = 502 Score = 228 bits (582), Expect = 4e-58 Identities = 108/191 (56%), Positives = 141/191 (73%), Gaps = 1/191 (0%) Frame = +3 Query: 18 ITNLILNTDSKALPQTLEAHNIDWTQDLVHKTLKRLWNHGPKALEFFNILDRHLSYTHSX 197 I L+L +D K+L +L + +T +LV K LKRLW HGPKAL+FF L+ H SY HS Sbjct: 53 IATLVLESDPKSLRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSA 112 Query: 198 XXXXXXXXXXXRLREYKTLWTLMTRMKTRQLGPSPKTFAIVIERLVAAGKPDRAVKVFLS 377 R+R+YKT+W L+ RM+ R++GPS KTFAI+ ER VAAGKPDRA+KVFLS Sbjct: 113 SSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLS 172 Query: 378 MHEHGVIQNLNCFNMFLDVLCKSRRVEMAY-NLFKVFRGRFRVDTITYNVLVNGFCLIKR 554 M EHG Q+L+ FN LD+LCKS+RVEMAY NLFKV RG+F+ D ++YN++ NG+CLIKR Sbjct: 173 MREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKR 232 Query: 555 TPRGLEIMREM 587 TP+ LE+++EM Sbjct: 233 TPKALEVLKEM 243 >ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial-like [Vitis vinifera] Length = 450 Score = 224 bits (571), Expect = 8e-57 Identities = 114/224 (50%), Positives = 143/224 (63%), Gaps = 29/224 (12%) Frame = +3 Query: 3 PQDITITNLILNTDSKALPQTLEAHNIDWTQDLVHKTLKRLWNHGPKALEFFNILDRHLS 182 PQD TI NL+L TDS+ L +TLE + ++WT +LV + LK LWNHGPKAL+FF LD H + Sbjct: 37 PQDATIVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPT 96 Query: 183 YTHSXXXXXXXXXXXXRLREYKTLWTLMTRMKTRQLGPSPKTFAIVIERLVAAGKPDRAV 362 Y H RLR+YKTLWTL+ RM+TR+LGP+PKTFAI+ ER V+AGKPDRA+ Sbjct: 97 YAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAI 156 Query: 363 KVFLSMHEHGVIQNLNCFNMFLDVLCKSRRVEMAYN-LFKVFRGRFR------------- 500 K+F SMHEHG +Q+LN FN LDVLCKS+RVEMA N LFKVFRGRFR Sbjct: 157 KIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGRFRILLKGFFRAGQLK 216 Query: 501 ---------------VDTITYNVLVNGFCLIKRTPRGLEIMREM 587 +D +TY +V+GF + + + EM Sbjct: 217 EAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEM 260 Score = 68.6 bits (166), Expect = 8e-10 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Frame = +3 Query: 231 RLREYKTLWTLMTRMKTRQLGPSPKTFAIVIERLVAAGKPDRAVKVFLSMHEHGVIQNLN 410 R + K W +MK R+ T+ V+ AG+ +A +VF M GV+ ++ Sbjct: 211 RAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVA 270 Query: 411 CFNMFLDVLCKSRRVEMAYNLF-KVFRGRFRVDTITYNVLVNGFCLIKRTPRGLEIMREM 587 +N F+ VLCK VE A ++F ++ R + ++ TYNV++ G C + R + +E M M Sbjct: 271 TYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARM 330 >emb|CBI15095.3| unnamed protein product [Vitis vinifera] Length = 815 Score = 224 bits (571), Expect = 8e-57 Identities = 113/216 (52%), Positives = 142/216 (65%), Gaps = 21/216 (9%) Frame = +3 Query: 3 PQDITITNLILNTDSKALPQTLEAHNIDWTQDLVHKTLKRLWNHGPKALEFFNILDRHLS 182 PQD TI NL+L TDS+ L +TLE + ++WT +LV + LK LWNHGPKAL+FF LD H + Sbjct: 37 PQDATIVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPT 96 Query: 183 YTHSXXXXXXXXXXXXRLREYKTLWTLMTRMKTRQLGPSPKTFAIVIERLVAAGKPDRAV 362 Y H RLR+YKTLWTL+ RM+TR+LGP+PKTFAI+ ER V+AGKPDRA+ Sbjct: 97 YAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAI 156 Query: 363 KVFLSMHEHGVIQNLNCFNMFLDVLCKSRRVEMAYN-LFKVFRGRFR------------- 500 K+F SMHEHG +Q+LN FN LDVLCKS+RVEMA N LFKVFRG FR Sbjct: 157 KIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQ 216 Query: 501 -------VDTITYNVLVNGFCLIKRTPRGLEIMREM 587 +D +TY +V+GF + + + EM Sbjct: 217 MKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEM 252 Score = 68.6 bits (166), Expect = 8e-10 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Frame = +3 Query: 231 RLREYKTLWTLMTRMKTRQLGPSPKTFAIVIERLVAAGKPDRAVKVFLSMHEHGVIQNLN 410 R + K W +MK R+ T+ V+ AG+ +A +VF M GV+ ++ Sbjct: 203 RAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVA 262 Query: 411 CFNMFLDVLCKSRRVEMAYNLF-KVFRGRFRVDTITYNVLVNGFCLIKRTPRGLEIMREM 587 +N F+ VLCK VE A ++F ++ R + ++ TYNV++ G C + R + +E M M Sbjct: 263 TYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARM 322