BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023986
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72742.1| RAD23 protein, isoform II [Daucus carota]             368   1e-99
emb|CBI25247.3| unnamed protein product [Vitis vinifera]              302   6e-80
ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23...   301   1e-79
ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|XP_002512770.1| uv excision repair protein rad23, putative [...   280   3e-73

>emb|CAA72742.1| RAD23 protein, isoform II [Daucus carota]
          Length = 379

 Score =  368 bits (944), Expect = 1e-99
 Identities = 180/200 (90%), Positives = 191/200 (95%)
 Frame = -3

Query: 897 NPERAVDYLYSGIPEMAEAAVSLSHFQGDQATAGNNAISESGVAGAARGPPNSSPLNLFP 718
           NPERAVDYLYSGIPEMAEAAV +SHFQGDQ  AGNNAIS++GVAGAA G PNS PLN+FP
Sbjct: 180 NPERAVDYLYSGIPEMAEAAVPVSHFQGDQINAGNNAISDNGVAGAAPGAPNSLPLNMFP 239

Query: 717 QETLSGATGAGIGSLEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLLRQIQEHH 538
           QETLSG TGAG+GSLEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLLRQIQEHH
Sbjct: 240 QETLSGVTGAGLGSLEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLLRQIQEHH 299

Query: 537 EEFLQLINEPVDASEGDMFDQPEEDVPQEVSVTPADQEAIERIEAMGFDRGLAIEAFLAC 358
           EEFLQLINEPV+ASEGDMFDQPE+DVPQE++VT ADQEAIER+EAMGFDRGL IEAFLAC
Sbjct: 300 EEFLQLINEPVEASEGDMFDQPEQDVPQEITVTAADQEAIERLEAMGFDRGLVIEAFLAC 359

Query: 357 DRNEELAINYLLENAGDFED 298
           DRNEELA+NYLLENAGDFED
Sbjct: 360 DRNEELAVNYLLENAGDFED 379


>emb|CBI25247.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  302 bits (774), Expect = 6e-80
 Identities = 149/200 (74%), Positives = 167/200 (83%)
 Frame = -3

Query: 897 NPERAVDYLYSGIPEMAEAAVSLSHFQGDQATAGNNAISESGVAGAARGPPNSSPLNLFP 718
           NPERAVDYLYSGIPE AE AV ++HF  DQ T G      +  A  A G PNSSPLN+FP
Sbjct: 206 NPERAVDYLYSGIPEAAEVAVPVAHFPADQETGG------AAPAAPASGVPNSSPLNMFP 259

Query: 717 QETLSGATGAGIGSLEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLLRQIQEHH 538
           QETLSGA G G+GSLEFLRNN QFQ LR+MVQ NPQILQPML ELGKQNP LLR IQEHH
Sbjct: 260 QETLSGAAGGGLGSLEFLRNNHQFQALRAMVQANPQILQPMLQELGKQNPHLLRLIQEHH 319

Query: 537 EEFLQLINEPVDASEGDMFDQPEEDVPQEVSVTPADQEAIERIEAMGFDRGLAIEAFLAC 358
            EFLQLINEP++ SEGD+FDQPE+++P  ++VTPA+QEAIER+EAMGFDR L IEAFLAC
Sbjct: 320 AEFLQLINEPLEGSEGDIFDQPEQELPHAINVTPAEQEAIERLEAMGFDRALVIEAFLAC 379

Query: 357 DRNEELAINYLLENAGDFED 298
           DRNEELA+NYLLENAGD+ED
Sbjct: 380 DRNEELAVNYLLENAGDYED 399


>ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23-1-like [Vitis
           vinifera]
          Length = 400

 Score =  301 bits (771), Expect = 1e-79
 Identities = 149/200 (74%), Positives = 167/200 (83%)
 Frame = -3

Query: 897 NPERAVDYLYSGIPEMAEAAVSLSHFQGDQATAGNNAISESGVAGAARGPPNSSPLNLFP 718
           NPERAVDYLYSGIPE AE AV ++HF  DQ T      S +  A  A G PNSSPLN+FP
Sbjct: 206 NPERAVDYLYSGIPEAAEVAVPVAHFPADQETG-----SGAAPAAPASGVPNSSPLNMFP 260

Query: 717 QETLSGATGAGIGSLEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLLRQIQEHH 538
           QETLSGA G G+GSLEFLRNN QFQ LR+MVQ NPQILQPML ELGKQNP LLR IQEHH
Sbjct: 261 QETLSGAAGGGLGSLEFLRNNHQFQALRAMVQANPQILQPMLQELGKQNPHLLRLIQEHH 320

Query: 537 EEFLQLINEPVDASEGDMFDQPEEDVPQEVSVTPADQEAIERIEAMGFDRGLAIEAFLAC 358
            EFLQLINEP++ SEGD+FDQPE+++P  ++VTPA+QEAIER+EAMGFDR L IEAFLAC
Sbjct: 321 AEFLQLINEPLEGSEGDIFDQPEQELPHAINVTPAEQEAIERLEAMGFDRALVIEAFLAC 380

Query: 357 DRNEELAINYLLENAGDFED 298
           DRNEELA+NYLLENAGD+ED
Sbjct: 381 DRNEELAVNYLLENAGDYED 400


>ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|222841402|gb|EEE78949.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  288 bits (736), Expect = 2e-75
 Identities = 150/207 (72%), Positives = 167/207 (80%), Gaps = 7/207 (3%)
 Frame = -3

Query: 897 NPERAVDYLYSGIPEMAEAAVSLSHFQGDQATAGNNAISESGVAGAARGP----PNSSPL 730
           NPERAVDYLYSGIPE AE AV ++ F  DQAT       E+G A AA  P    PNSSPL
Sbjct: 160 NPERAVDYLYSGIPETAEVAVPVARFPADQAT-------ETGAAPAAPAPAFGAPNSSPL 212

Query: 729 NLFPQETLSGA---TGAGIGSLEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLL 559
           N+FP ET+SG     G G+GSL+FLRNN QFQ LRSMVQ NPQILQPML ELGKQNPQLL
Sbjct: 213 NMFP-ETISGGGGGAGGGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLL 271

Query: 558 RQIQEHHEEFLQLINEPVDASEGDMFDQPEEDVPQEVSVTPADQEAIERIEAMGFDRGLA 379
           R IQEHH EFLQLINEP+D SEGD+FDQP++D+P  ++VTPA+QEAIER+EAMGFDR L 
Sbjct: 272 RIIQEHHAEFLQLINEPLDGSEGDIFDQPDQDMPHAINVTPAEQEAIERLEAMGFDRALV 331

Query: 378 IEAFLACDRNEELAINYLLENAGDFED 298
           IEAFLACDRNE+LA NYLLENAGDFED
Sbjct: 332 IEAFLACDRNEQLAANYLLENAGDFED 358


>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223547781|gb|EEF49273.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 359

 Score =  280 bits (716), Expect = 3e-73
 Identities = 146/205 (71%), Positives = 162/205 (79%), Gaps = 5/205 (2%)
 Frame = -3

Query: 897 NPERAVDYLYSGIPEMAEAAVSLSHFQGDQATAGNNAISESGVAGAA--RGPPNSSPLNL 724
           NPERAVDYLYSGIPE AE AV ++H    QAT       E+G A AA   G PNSSPLN+
Sbjct: 162 NPERAVDYLYSGIPETAEVAVPVAHLPAGQAT-------ETGAAPAAPLSGVPNSSPLNM 214

Query: 723 FPQETLSGATGA---GIGSLEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLLRQ 553
           FPQE LS A G    G+GSL+FLRNN QFQTLRSMVQ NPQILQPML ELGKQNPQLLR 
Sbjct: 215 FPQEALSAAGGGSAGGLGSLDFLRNNAQFQTLRSMVQANPQILQPMLQELGKQNPQLLRM 274

Query: 552 IQEHHEEFLQLINEPVDASEGDMFDQPEEDVPQEVSVTPADQEAIERIEAMGFDRGLAIE 373
           IQEHH EFLQL+NEP++ SEGD+FDQ E+D+P  ++VTPA+Q AIER+ AMGFDR L IE
Sbjct: 275 IQEHHAEFLQLLNEPLEGSEGDIFDQGEQDMPHAINVTPAEQAAIERLVAMGFDRALVIE 334

Query: 372 AFLACDRNEELAINYLLENAGDFED 298
           AFLACDRNE LA NYLLEN GDFED
Sbjct: 335 AFLACDRNEVLAANYLLENGGDFED 359