BLASTX nr result

ID: Cnidium21_contig00023982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023982
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332196.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117
ref|XP_002330609.1| predicted protein [Populus trichocarpa] gi|2...   412   e-113
ref|XP_002330610.1| predicted protein [Populus trichocarpa] gi|2...   412   e-113
ref|XP_002299045.1| predicted protein [Populus trichocarpa] gi|2...   412   e-112
ref|XP_002333339.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112

>ref|XP_002332196.1| predicted protein [Populus trichocarpa] gi|222875303|gb|EEF12434.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  426 bits (1096), Expect = e-117
 Identities = 209/352 (59%), Positives = 269/352 (76%), Gaps = 4/352 (1%)
 Frame = -3

Query: 1238 SGGGYSMLARKYGLAADNVIDARMVDVNGIILDRTSMGEDLFWAIRGGGGSSFGVILSWK 1059
            SGGGY ML RKYGLAAD++IDA++VDV G ILDR SMGEDLFWAIRGGGG++FGV+++WK
Sbjct: 174  SGGGYGMLMRKYGLAADHIIDAQLVDVKGRILDRESMGEDLFWAIRGGGGNTFGVVIAWK 233

Query: 1058 IKLVEVPPIVTIFSVDKTLEQNATALIHKWQSVAPNIDKDLNIKIQLTCILSNTSIREDK 879
            I LV  PP VT+F+V +TLEQNA+ L+H+WQ VA  + +DL I+I L  + ++T   +  
Sbjct: 234  ISLVSAPPTVTVFNVQRTLEQNASKLVHRWQFVADKLHEDLFIRIILNRV-NSTEEGKSN 292

Query: 878  KTIRVTFMSLFLGKIDRLLSLMQLSFPELGLIRENCSEMSWIRSALFFTMLPTGASPSVL 699
             TI+ +F SLFLG IDRLL L+Q SFPELGL++E+C EMSWI+S L+F   P+ +S  VL
Sbjct: 293  TTIQASFNSLFLGGIDRLLPLIQDSFPELGLVKEDCIEMSWIQSVLYFDGFPSNSSLDVL 352

Query: 698  ANRTLLPKFASKSKSSYVRQPVPEEGLHGIWELLFLRDPETTLVMLSPYGGRMSEISESQ 519
             +RT   +   K+KS YV++P+PE GL GIWE  F +D  T +++ SPYGG+MSEISES 
Sbjct: 353  LDRTPSTRRNFKAKSDYVKEPIPELGLEGIWERFFDKDINTPILIFSPYGGKMSEISESS 412

Query: 518  TPFPHRAGNLYIINIGAFSAGD----TQQAVDWVRNLYAYLDPYVLNSPRSSYVNYNDLD 351
             PFPHRAGN+Y I    +   +    T++ + W+R LY+YL PYV  +PR++YVNY DLD
Sbjct: 413  IPFPHRAGNIYKIQHLIYWDEEGIVATKRHISWIRRLYSYLAPYVSKTPRAAYVNYRDLD 472

Query: 350  LGINNPQGRTSYQQASIWGKKYFKDNFDRLVRVKFSVDPTNFFRHEQSIPPI 195
            +GINN  G TSY+QASIWG KYFK+NFDRLVRVK +VDP NFFR+EQSIPP+
Sbjct: 473  IGINNHAGNTSYRQASIWGLKYFKNNFDRLVRVKTAVDPANFFRNEQSIPPL 524


>ref|XP_002330609.1| predicted protein [Populus trichocarpa] gi|222872167|gb|EEF09298.1|
            predicted protein [Populus trichocarpa]
          Length = 534

 Score =  412 bits (1060), Expect = e-113
 Identities = 205/352 (58%), Positives = 256/352 (72%), Gaps = 5/352 (1%)
 Frame = -3

Query: 1238 SGGGYSMLARKYGLAADNVIDARMVDVNGIILDRTSMGEDLFWAIRGGGGSSFGVILSWK 1059
            SGGGY  L RKYGLAADNVIDA ++D NG +LDR SMGEDLFWAIRGGGG+SFGV+ +WK
Sbjct: 182  SGGGYGGLLRKYGLAADNVIDAELIDANGRVLDRESMGEDLFWAIRGGGGNSFGVVTAWK 241

Query: 1058 IKLVEVPPIVTIFSVDKTLEQNATALIHKWQSVAPNIDKDLNIKIQLTCILSNTSIREDK 879
            + LVEVPP VT+F+V K L++NAT LIH+WQ VA  + +D+ I   +  I    S +   
Sbjct: 242  VNLVEVPPTVTVFAVPKVLKENATKLIHRWQYVANKLPEDIVIAAYVNRI---NSSQGGN 298

Query: 878  KTIRVTFMSLFLGKIDRLLSLMQLSFPELGLIRENCSEMSWIRSALFFTMLPTGASPSVL 699
             TI+ TF SLFLG +DRLL LMQ SFPELGL++++C E+SWI  ALF    P+ AS  VL
Sbjct: 299  PTIQATFTSLFLGGVDRLLPLMQESFPELGLVKDDCIELSWIEFALFLAGFPSNASLDVL 358

Query: 698  ANRTLLPKFAS-KSKSSYVRQPVPEEGLHGIWELLFLRDPETTLVMLSPYGGRMSEISES 522
             +RT      S K+KS YV+QP+PE  L G+WE  F +D E+  + + PYGG+M EISES
Sbjct: 359  LDRTPDQSITSFKAKSDYVKQPLPETALEGMWETFFEKDIESPSLFMVPYGGKMEEISES 418

Query: 521  QTPFPHRAGNLYIINIGAFSAGDTQQA----VDWVRNLYAYLDPYVLNSPRSSYVNYNDL 354
              PFPHRAGNLY I+       + ++A    + W+R LY+Y+ PYV  +PR +YVNY DL
Sbjct: 419  SIPFPHRAGNLYKIHYYVAWTEEGKEASERHISWIRRLYSYMTPYVSKNPREAYVNYRDL 478

Query: 353  DLGINNPQGRTSYQQASIWGKKYFKDNFDRLVRVKFSVDPTNFFRHEQSIPP 198
            DLGINN  G TSY+QASIWG+KYFK+NFD+LVR+K  VDP NFFR+EQSIPP
Sbjct: 479  DLGINNLAGNTSYKQASIWGRKYFKNNFDKLVRIKTEVDPANFFRNEQSIPP 530


>ref|XP_002330610.1| predicted protein [Populus trichocarpa] gi|222872168|gb|EEF09299.1|
            predicted protein [Populus trichocarpa]
          Length = 533

 Score =  412 bits (1059), Expect = e-113
 Identities = 204/353 (57%), Positives = 262/353 (74%), Gaps = 5/353 (1%)
 Frame = -3

Query: 1238 SGGGYSMLARKYGLAADNVIDARMVDVNGIILDRTSMGEDLFWAIRGGGGSSFGVILSWK 1059
            SGGGYS ++RKYGLA+DNVIDA+++D  G ILDR SMGEDLFWAIRGGGG SFGV+++W+
Sbjct: 182  SGGGYSTISRKYGLASDNVIDAQLIDAKGRILDRESMGEDLFWAIRGGGGQSFGVVIAWR 241

Query: 1058 IKLVEVPPIVTIFSVDKTLEQNATALIHKWQSVAPNIDKDLNIKIQLTCILSNTSIREDK 879
            I+LVEVPP VT+F+  +TLEQNAT LIH+WQ VA  + +D+ I + +  +    S  E K
Sbjct: 242  IELVEVPPKVTVFTAARTLEQNATKLIHRWQYVANQLPEDIIIDVLVNRV---NSSEEGK 298

Query: 878  KTIRVTFMSLFLGKIDRLLSLMQLSFPELGLIRENCSEMSWIRSALFFTMLPTGASPSVL 699
             TI+  F SLFLG++D+LL LMQ SFPELGL ++ C+EMSWI S ++    P+ AS +VL
Sbjct: 299  STIQAAFFSLFLGEVDQLLLLMQESFPELGLAKDECTEMSWIESVIYIIGFPSNASLNVL 358

Query: 698  ANRT-LLPKFASKSKSSYVRQPVPEEGLHGIWELLFLRDPETTLVMLSPYGGRMSEISES 522
             +RT   P    K+KS YV++P+PE    GIW+  F +D E  +  + PYGG+M EISES
Sbjct: 359  LDRTPQPPSLQFKAKSDYVQEPIPEIAFEGIWKRFFEKDIEVPVFFMIPYGGKMDEISES 418

Query: 521  QTPFPHRAGNLYIINIGAFSAGDTQQA----VDWVRNLYAYLDPYVLNSPRSSYVNYNDL 354
             TPFPHRAGN YI       + +T++A    + W+R LY Y+ PYV  +PR++YVNY DL
Sbjct: 419  STPFPHRAGNRYIFVPVVSWSEETKEASQRHLAWIRRLYRYMTPYVSKNPRAAYVNYRDL 478

Query: 353  DLGINNPQGRTSYQQASIWGKKYFKDNFDRLVRVKFSVDPTNFFRHEQSIPPI 195
            DLG+NN  G TSY+QASIWG+KYFK+NFDRLVRVK  VDPTNFFR+EQSIPP+
Sbjct: 479  DLGVNN-LGYTSYKQASIWGRKYFKNNFDRLVRVKTEVDPTNFFRNEQSIPPL 530


>ref|XP_002299045.1| predicted protein [Populus trichocarpa] gi|222846303|gb|EEE83850.1|
            predicted protein [Populus trichocarpa]
          Length = 533

 Score =  412 bits (1058), Expect = e-112
 Identities = 206/354 (58%), Positives = 261/354 (73%), Gaps = 6/354 (1%)
 Frame = -3

Query: 1238 SGGGYSMLARKYGLAADNVIDARMVDVNGIILDRTSMGEDLFWAIRGGGGSSFGVILSWK 1059
            SGGG+  + RK+GLA+DNVIDA ++D  G ILDR SMGEDLFWAIRGGGG SFGV+++WK
Sbjct: 182  SGGGHGTMVRKFGLASDNVIDAHLIDSKGRILDRASMGEDLFWAIRGGGGQSFGVVVAWK 241

Query: 1058 IKLVEVPPIVTIFSVDKTLEQNATALIHKWQSVAPNIDKDLNIKIQLTCILSNTSIREDK 879
            I LVEVP  VT+FSV +TLEQNAT L+H+WQ VA  + +DL I +Q+T +    S +E  
Sbjct: 242  ISLVEVPSTVTMFSVSRTLEQNATKLLHRWQYVANTLPEDLVIDVQVTRV---NSSQEGN 298

Query: 878  KTIRVTFMSLFLGKIDRLLSLMQLSFPELGLIRENCSEMSWIRSALFFTMLPTGASPSVL 699
             TI+ TF SLFLG++D+LL +MQ SFPELGL++++C EMSWI S  +     + AS  VL
Sbjct: 299  TTIQATFFSLFLGEVDQLLPVMQESFPELGLVKDDCFEMSWIESVFYTGGFTSNASLDVL 358

Query: 698  ANRT--LLPKFASKSKSSYVRQPVPEEGLHGIWELLFLRDPETTLVMLSPYGGRMSEISE 525
             NRT   +P+F  K+KS YV++P+PE    GIWE  F  D E   ++L PYGG+M EISE
Sbjct: 359  LNRTPRSIPRF--KAKSDYVKEPMPEIAFEGIWERFFEEDIEAPTLILIPYGGKMDEISE 416

Query: 524  SQTPFPHRAGNLYIINIGAFSAGDTQQA----VDWVRNLYAYLDPYVLNSPRSSYVNYND 357
            S TPFPHRAGNLY++        ++++A    + W+R LY+YL  YV  +PR +YVNY D
Sbjct: 417  SSTPFPHRAGNLYVLVSSVSWREESKEASRRHMAWIRRLYSYLTKYVSKNPREAYVNYRD 476

Query: 356  LDLGINNPQGRTSYQQASIWGKKYFKDNFDRLVRVKFSVDPTNFFRHEQSIPPI 195
            LDLGINN  G TSY+QASIWG+KYFK+NFDRLVRVK  VDPTNFFR+EQSIP +
Sbjct: 477  LDLGINNLTGTTSYKQASIWGRKYFKNNFDRLVRVKTEVDPTNFFRNEQSIPSL 530


>ref|XP_002333339.1| predicted protein [Populus trichocarpa] gi|222836259|gb|EEE74680.1|
            predicted protein [Populus trichocarpa]
          Length = 533

 Score =  411 bits (1056), Expect = e-112
 Identities = 203/353 (57%), Positives = 261/353 (73%), Gaps = 5/353 (1%)
 Frame = -3

Query: 1238 SGGGYSMLARKYGLAADNVIDARMVDVNGIILDRTSMGEDLFWAIRGGGGSSFGVILSWK 1059
            SGGGY  ++RKYGLA+DNVIDA+++D  G ILDR SMGEDLFWAIRGGGG SFGV+++W+
Sbjct: 182  SGGGYGTISRKYGLASDNVIDAQLIDAKGRILDRESMGEDLFWAIRGGGGQSFGVVIAWR 241

Query: 1058 IKLVEVPPIVTIFSVDKTLEQNATALIHKWQSVAPNIDKDLNIKIQLTCILSNTSIREDK 879
            IKLVEVPP VT+F   +TLEQNAT LIH+WQ VA  + +D+ I + +  +    S  E K
Sbjct: 242  IKLVEVPPKVTVFIAARTLEQNATKLIHRWQYVANQLPEDIIIDVLVNRV---NSSEEGK 298

Query: 878  KTIRVTFMSLFLGKIDRLLSLMQLSFPELGLIRENCSEMSWIRSALFFTMLPTGASPSVL 699
             TI+  F SLFLG++D+LL LMQ SFPELGL ++ C+EMSWI S ++    P+ AS +VL
Sbjct: 299  STIQAAFFSLFLGEVDQLLLLMQESFPELGLAKDECTEMSWIESVIYIGGFPSNASLNVL 358

Query: 698  ANRT-LLPKFASKSKSSYVRQPVPEEGLHGIWELLFLRDPETTLVMLSPYGGRMSEISES 522
             +RT   P    K+KS YV++P+PE    GIW+  F +D E  +  +  YGG+M EISES
Sbjct: 359  LDRTPQPPSLQFKAKSDYVQEPIPEIAFEGIWKRFFEKDIEVPVFFMVAYGGKMDEISES 418

Query: 521  QTPFPHRAGNLYIINIGAFSAGDTQQA----VDWVRNLYAYLDPYVLNSPRSSYVNYNDL 354
             TPFPHRAGN YI+    + + +T++A    + W+R LY Y+ PYV  +PR++YVNY DL
Sbjct: 419  STPFPHRAGNRYIVAPVVYWSEETKEASQRHLAWIRRLYRYMTPYVSKNPRAAYVNYRDL 478

Query: 353  DLGINNPQGRTSYQQASIWGKKYFKDNFDRLVRVKFSVDPTNFFRHEQSIPPI 195
            DLG+NN  G TSY+QASIWG+KYFK+NFDRLVRVK  VDPTNFFR+EQSIPP+
Sbjct: 479  DLGVNN-LGYTSYKQASIWGRKYFKNNFDRLVRVKTEVDPTNFFRNEQSIPPL 530


Top