BLASTX nr result
ID: Cnidium21_contig00023979
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00023979 (754 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323570.1| predicted protein [Populus trichocarpa] gi|2... 220 2e-55 ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 214 1e-53 emb|CBI30403.3| unnamed protein product [Vitis vinifera] 214 1e-53 ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal doma... 213 5e-53 ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal doma... 213 5e-53 >ref|XP_002323570.1| predicted protein [Populus trichocarpa] gi|222868200|gb|EEF05331.1| predicted protein [Populus trichocarpa] Length = 563 Score = 220 bits (561), Expect = 2e-55 Identities = 102/146 (69%), Positives = 123/146 (84%) Frame = +3 Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494 MS LGFKS VY G+ CLGEL+ IP ++ FPNNEIRIHH+S +SERC P+SILQTI+P Sbjct: 1 MSRLGFKSPVYHGEVCLGELDVIPVTEKGFLFPNNEIRIHHISQQSERCPPLSILQTISP 60 Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674 FSV CKLES S EQ HL++LH++CFH++KTAVVL+G+EEIHLVAM SKQK +PCFWC++ Sbjct: 61 FSVRCKLESSSPMEQSHLINLHASCFHEVKTAVVLIGDEEIHLVAMPSKQKKFPCFWCFA 120 Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752 GLYD+CL MLN+RCLSIVFDLDE Sbjct: 121 VPVGLYDSCLRMLNMRCLSIVFDLDE 146 >ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 2-like [Vitis vinifera] Length = 789 Score = 214 bits (546), Expect = 1e-53 Identities = 102/146 (69%), Positives = 122/146 (83%) Frame = +3 Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494 MS LGFKS+VY GD LGEL+ IP KDQS +FPNNEIR+HH+S SERC P+SIL TI+ Sbjct: 1 MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60 Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674 FSV CKLES S +QP+L++LH++CFH+LKTAVVL+G+EE+HLVAM SKQK +PCFWCYS Sbjct: 61 FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120 Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752 GLY + L MLNLRCL+IVFDLDE Sbjct: 121 VPCGLYSSSLWMLNLRCLAIVFDLDE 146 >emb|CBI30403.3| unnamed protein product [Vitis vinifera] Length = 853 Score = 214 bits (546), Expect = 1e-53 Identities = 102/146 (69%), Positives = 122/146 (83%) Frame = +3 Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494 MS LGFKS+VY GD LGEL+ IP KDQS +FPNNEIR+HH+S SERC P+SIL TI+ Sbjct: 1 MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60 Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674 FSV CKLES S +QP+L++LH++CFH+LKTAVVL+G+EE+HLVAM SKQK +PCFWCYS Sbjct: 61 FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120 Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752 GLY + L MLNLRCL+IVFDLDE Sbjct: 121 VPCGLYSSSLWMLNLRCLAIVFDLDE 146 >ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2-like [Cucumis sativus] Length = 837 Score = 213 bits (541), Expect = 5e-53 Identities = 100/146 (68%), Positives = 121/146 (82%) Frame = +3 Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494 MS LGFKSVV+ GD LGEL+ IP DQ+ +FPNNEIRIH +S SERC P+S+LQTI+ Sbjct: 1 MSRLGFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS 60 Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674 FS+ CKL+S EQPHL+ LH +CFH+LKTA+VL+G+EEIHLVAM SKQKN+PCFWC++ Sbjct: 61 FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFA 120 Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752 GLY +CLGMLNLRCL+IVFDLDE Sbjct: 121 VPCGLYLSCLGMLNLRCLAIVFDLDE 146 >ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2-like [Cucumis sativus] Length = 829 Score = 213 bits (541), Expect = 5e-53 Identities = 100/146 (68%), Positives = 121/146 (82%) Frame = +3 Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494 MS LGFKSVV+ GD LGEL+ IP DQ+ +FPNNEIRIH +S SERC P+S+LQTI+ Sbjct: 1 MSRLGFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS 60 Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674 FS+ CKL+S EQPHL+ LH +CFH+LKTA+VL+G+EEIHLVAM SKQKN+PCFWC++ Sbjct: 61 FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFA 120 Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752 GLY +CLGMLNLRCL+IVFDLDE Sbjct: 121 VPCGLYLSCLGMLNLRCLAIVFDLDE 146