BLASTX nr result

ID: Cnidium21_contig00023979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023979
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323570.1| predicted protein [Populus trichocarpa] gi|2...   220   2e-55
ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   214   1e-53
emb|CBI30403.3| unnamed protein product [Vitis vinifera]              214   1e-53
ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal doma...   213   5e-53
ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal doma...   213   5e-53

>ref|XP_002323570.1| predicted protein [Populus trichocarpa] gi|222868200|gb|EEF05331.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  220 bits (561), Expect = 2e-55
 Identities = 102/146 (69%), Positives = 123/146 (84%)
 Frame = +3

Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494
           MS LGFKS VY G+ CLGEL+ IP  ++   FPNNEIRIHH+S +SERC P+SILQTI+P
Sbjct: 1   MSRLGFKSPVYHGEVCLGELDVIPVTEKGFLFPNNEIRIHHISQQSERCPPLSILQTISP 60

Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674
           FSV CKLES S  EQ HL++LH++CFH++KTAVVL+G+EEIHLVAM SKQK +PCFWC++
Sbjct: 61  FSVRCKLESSSPMEQSHLINLHASCFHEVKTAVVLIGDEEIHLVAMPSKQKKFPCFWCFA 120

Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752
              GLYD+CL MLN+RCLSIVFDLDE
Sbjct: 121 VPVGLYDSCLRMLNMRCLSIVFDLDE 146


>ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 2-like [Vitis vinifera]
          Length = 789

 Score =  214 bits (546), Expect = 1e-53
 Identities = 102/146 (69%), Positives = 122/146 (83%)
 Frame = +3

Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494
           MS LGFKS+VY GD  LGEL+ IP KDQS +FPNNEIR+HH+S  SERC P+SIL TI+ 
Sbjct: 1   MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60

Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674
           FSV CKLES S  +QP+L++LH++CFH+LKTAVVL+G+EE+HLVAM SKQK +PCFWCYS
Sbjct: 61  FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120

Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752
              GLY + L MLNLRCL+IVFDLDE
Sbjct: 121 VPCGLYSSSLWMLNLRCLAIVFDLDE 146


>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  214 bits (546), Expect = 1e-53
 Identities = 102/146 (69%), Positives = 122/146 (83%)
 Frame = +3

Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494
           MS LGFKS+VY GD  LGEL+ IP KDQS +FPNNEIR+HH+S  SERC P+SIL TI+ 
Sbjct: 1   MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60

Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674
           FSV CKLES S  +QP+L++LH++CFH+LKTAVVL+G+EE+HLVAM SKQK +PCFWCYS
Sbjct: 61  FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120

Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752
              GLY + L MLNLRCL+IVFDLDE
Sbjct: 121 VPCGLYSSSLWMLNLRCLAIVFDLDE 146


>ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Cucumis sativus]
          Length = 837

 Score =  213 bits (541), Expect = 5e-53
 Identities = 100/146 (68%), Positives = 121/146 (82%)
 Frame = +3

Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494
           MS LGFKSVV+ GD  LGEL+ IP  DQ+ +FPNNEIRIH +S  SERC P+S+LQTI+ 
Sbjct: 1   MSRLGFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS 60

Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674
           FS+ CKL+S    EQPHL+ LH +CFH+LKTA+VL+G+EEIHLVAM SKQKN+PCFWC++
Sbjct: 61  FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFA 120

Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752
              GLY +CLGMLNLRCL+IVFDLDE
Sbjct: 121 VPCGLYLSCLGMLNLRCLAIVFDLDE 146


>ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Cucumis sativus]
          Length = 829

 Score =  213 bits (541), Expect = 5e-53
 Identities = 100/146 (68%), Positives = 121/146 (82%)
 Frame = +3

Query: 315 MSGLGFKSVVYDGDCCLGELETIPDKDQSLRFPNNEIRIHHLSLRSERCSPISILQTIAP 494
           MS LGFKSVV+ GD  LGEL+ IP  DQ+ +FPNNEIRIH +S  SERC P+S+LQTI+ 
Sbjct: 1   MSRLGFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS 60

Query: 495 FSVPCKLESKSINEQPHLLSLHSTCFHQLKTAVVLLGEEEIHLVAMLSKQKNYPCFWCYS 674
           FS+ CKL+S    EQPHL+ LH +CFH+LKTA+VL+G+EEIHLVAM SKQKN+PCFWC++
Sbjct: 61  FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFA 120

Query: 675 ARPGLYDACLGMLNLRCLSIVFDLDE 752
              GLY +CLGMLNLRCL+IVFDLDE
Sbjct: 121 VPCGLYLSCLGMLNLRCLAIVFDLDE 146


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