BLASTX nr result

ID: Cnidium21_contig00023976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023976
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ...   133   1e-29
ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                        132   3e-29
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...   132   4e-29
ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789...   131   5e-29

>ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin NUP145-like [Cucumis
           sativus]
          Length = 362

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/95 (66%), Positives = 74/95 (77%)
 Frame = -1

Query: 285 GDHPIKKELSLNVYELMPKLKHSDYFFEPRVEELATKESYEPGFCSHVKGFVVGRQGYGS 106
           G+  I  E   ++  LMPKL+HSDY+ EP+++ELA KE  EPGFC HVK FVVGR GYGS
Sbjct: 184 GEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGS 243

Query: 105 IKFLEETDVRELDLESYIEFRNREVIVYMDESKKP 1
           IKF  ETDVR LDLES ++F NREVIVY+DESKKP
Sbjct: 244 IKFFGETDVRRLDLESIVQFNNREVIVYLDESKKP 278


>ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|222846239|gb|EEE83786.1|
            predicted protein [Populus trichocarpa]
          Length = 942

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/95 (67%), Positives = 73/95 (76%)
 Frame = -1

Query: 285  GDHPIKKELSLNVYELMPKLKHSDYFFEPRVEELATKESYEPGFCSHVKGFVVGRQGYGS 106
            G+  I  E   ++  LMPKL+ SDYF EPR++ELA KE   PGFC HVK FVVGR GYGS
Sbjct: 748  GEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHVKDFVVGRHGYGS 807

Query: 105  IKFLEETDVRELDLESYIEFRNREVIVYMDESKKP 1
            IKFL ETDVR LDLES ++F NREVIVYMD+SKKP
Sbjct: 808  IKFLVETDVRRLDLESLVQFNNREVIVYMDDSKKP 842


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/95 (67%), Positives = 74/95 (77%)
 Frame = -1

Query: 285  GDHPIKKELSLNVYELMPKLKHSDYFFEPRVEELATKESYEPGFCSHVKGFVVGRQGYGS 106
            G+  I  E   ++  LMPKL+HSDY+ EPR++ELA KE  EPGFC  VK FVVGR GYGS
Sbjct: 826  GEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGS 885

Query: 105  IKFLEETDVRELDLESYIEFRNREVIVYMDESKKP 1
            IKFL ETDVR LDLES ++F +REVIVYMDESKKP
Sbjct: 886  IKFLGETDVRRLDLESLVQFNHREVIVYMDESKKP 920


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/95 (66%), Positives = 73/95 (76%)
 Frame = -1

Query: 285  GDHPIKKELSLNVYELMPKLKHSDYFFEPRVEELATKESYEPGFCSHVKGFVVGRQGYGS 106
            G+  I  E   ++  LMPKL HSDY+ EP+++ELA KE  EPGFC HVK FVVGR GYGS
Sbjct: 816  GEAAIVYEHGADIEALMPKLLHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGS 875

Query: 105  IKFLEETDVRELDLESYIEFRNREVIVYMDESKKP 1
            IKF  ETDVR LDLES ++F NREVIVY+DESKKP
Sbjct: 876  IKFFGETDVRRLDLESIVQFNNREVIVYLDESKKP 910


>ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789177 [Glycine max]
          Length = 1007

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/95 (68%), Positives = 74/95 (77%)
 Frame = -1

Query: 285  GDHPIKKELSLNVYELMPKLKHSDYFFEPRVEELATKESYEPGFCSHVKGFVVGRQGYGS 106
            G+  I  E   +V  LMPKL+ SDY+  PR+ ELA KE  EPGFCSHVK FVVGRQGYGS
Sbjct: 827  GEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGS 886

Query: 105  IKFLEETDVRELDLESYIEFRNREVIVYMDESKKP 1
            I+FL ETD+R LDLES I+F NREVIVYMD+SKKP
Sbjct: 887  IRFLGETDIRGLDLESLIQFNNREVIVYMDDSKKP 921


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