BLASTX nr result

ID: Cnidium21_contig00023973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023973
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528505.1| PREDICTED: uncharacterized protein LOC100802...    69   5e-10
ref|NP_177404.1| hydroxyproline-rich glycoprotein family protein...    64   2e-08
ref|XP_003627267.1| hypothetical protein MTR_8g020530 [Medicago ...    63   3e-08
ref|XP_002304137.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002883955.1| predicted protein [Arabidopsis lyrata subsp....    59   3e-07

>ref|XP_003528505.1| PREDICTED: uncharacterized protein LOC100802107 [Glycine max]
          Length = 161

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = -3

Query: 486 PKHRLHTYHKHKTPPRPPPSEEKLNLGKKVGLLFTGIVAILQVCVVAFLVIKSRQMFRDQ 307
           P HR    H+   PP PPP   K+N GKKVGLLF GI AI+QV VV FLVIK RQ+ +  
Sbjct: 96  PPHRRRR-HRRPPPPPPPPPPHKMNAGKKVGLLFVGIAAIMQVGVVGFLVIKRRQLLKSD 154

Query: 306 N 304
           +
Sbjct: 155 D 155


>ref|NP_177404.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|334183868|ref|NP_001185384.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
           gi|12323771|gb|AAG51851.1|AC010926_14 hypothetical
           protein; 72245-71838 [Arabidopsis thaliana]
           gi|38454042|gb|AAR20715.1| At1g72600 [Arabidopsis
           thaliana] gi|45592904|gb|AAS68106.1| At1g72600
           [Arabidopsis thaliana] gi|332197225|gb|AEE35346.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana] gi|332197226|gb|AEE35347.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 135

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = -3

Query: 483 KHRLHTYHKHKTPPRPPPSEEKLNLGKKVGLLFTGIVAILQVCVVAFLVIKSRQM 319
           K R   +HKH  PP PPP ++K+N GK VGL F G+ A LQV V AFL+ K RQ+
Sbjct: 75  KWRQRRHHKH--PPPPPPKKQKVNTGKTVGLFFAGVAAALQVVVAAFLIFKRRQL 127


>ref|XP_003627267.1| hypothetical protein MTR_8g020530 [Medicago truncatula]
           gi|355521289|gb|AET01743.1| hypothetical protein
           MTR_8g020530 [Medicago truncatula]
          Length = 168

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = -3

Query: 486 PKHRLHTYHKHKT--PPRPPPSEEKLNLGKKVGLLFTGIVAILQVCVVAFLVIKSRQMFR 313
           P   L  +H H    PP  PP +  +N GKKVGLLF GI AI+QV  V FLVIK RQ+ +
Sbjct: 98  PPPHLRRWHDHVQLPPPLAPPPQHSMNAGKKVGLLFVGIAAIMQVGFVGFLVIKRRQLLK 157

Query: 312 DQNVN*RFE 286
             N N R+E
Sbjct: 158 -TNDNDRYE 165


>ref|XP_002304137.1| predicted protein [Populus trichocarpa] gi|222841569|gb|EEE79116.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -3

Query: 456 HKTPPRPPPSEE-KLNLGKKVGLLFTGIVAILQVCVVAFLVIKSRQMFRDQNVN*RFE 286
           H  PP PPPS+  ++N GKK+GLLF GI AILQ+ VV FL  K RQ+ +   +N R+E
Sbjct: 109 HPPPPPPPPSKNHQMNSGKKIGLLFVGIAAILQIGVVGFLAYKRRQLLK---INDRYE 163


>ref|XP_002883955.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329795|gb|EFH60214.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -3

Query: 483 KHRLHTYHKHKTPPRPPPSEEKLNLGKKVGLLFTGIVAILQVCVVAFLVIKSRQM 319
           K R   +HKH  PP PP  ++K+N GK VGL F G+ A LQV V AFL+ K RQ+
Sbjct: 53  KWRQRRHHKH--PPPPPRKKQKVNTGKTVGLFFAGVAAALQVVVAAFLLFKRRQL 105


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