BLASTX nr result

ID: Cnidium21_contig00023970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023970
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   101   6e-20
emb|CBI40718.3| unnamed protein product [Vitis vinifera]              101   6e-20
emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]   101   6e-20
ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi...    98   6e-19
ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana...    92   4e-17

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/108 (49%), Positives = 66/108 (61%)
 Frame = +3

Query: 3   GAKNFKELFTFLGKQAILNAPGSPYAINFRSAVDESSAMKLMNTTTYXXXXXXXXXXXXX 182
           GAK FKE F F+G +A  + PGSPYAINF+ ++ ESS MK MN +TY             
Sbjct: 211 GAKTFKEWFAFIGTRAAPSVPGSPYAINFQPSIAESSGMKPMNVSTYSCGDNSLGCSCGD 270

Query: 183 XXXXXXXXXXXXXXXQKTGSCSVRIGSLKARCIEFAVAILYILLVSLF 326
                           K GSCSVRIGSLKA+CIEF++AILYI+LV++F
Sbjct: 271 CPSASVCSGYAPPSLHKEGSCSVRIGSLKAKCIEFSLAILYIILVTIF 318


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/108 (49%), Positives = 66/108 (61%)
 Frame = +3

Query: 3   GAKNFKELFTFLGKQAILNAPGSPYAINFRSAVDESSAMKLMNTTTYXXXXXXXXXXXXX 182
           GAK FKE F F+G +A  + PGSPYAINF+ ++ ESS MK MN +TY             
Sbjct: 144 GAKTFKEWFAFIGTRAAPSVPGSPYAINFQPSIAESSGMKPMNVSTYSCGDNSLGCSCGD 203

Query: 183 XXXXXXXXXXXXXXXQKTGSCSVRIGSLKARCIEFAVAILYILLVSLF 326
                           K GSCSVRIGSLKA+CIEF++AILYI+LV++F
Sbjct: 204 CPSASVCSGYAPPSLHKEGSCSVRIGSLKAKCIEFSLAILYIILVTIF 251


>emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]
          Length = 1050

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/108 (49%), Positives = 66/108 (61%)
 Frame = +3

Query: 3   GAKNFKELFTFLGKQAILNAPGSPYAINFRSAVDESSAMKLMNTTTYXXXXXXXXXXXXX 182
           GAK FKE F F+G +A  + PGSPYAINF+ ++ ESS MK MN +TY             
Sbjct: 144 GAKTFKEWFAFIGTRAAPSVPGSPYAINFQPSIAESSGMKPMNVSTYSCGDNSLGCSCGD 203

Query: 183 XXXXXXXXXXXXXXXQKTGSCSVRIGSLKARCIEFAVAILYILLVSLF 326
                           K GSCSVRIGSLKA+CIEF++AILYI+LV++F
Sbjct: 204 CPSASVCSGYAPPSLHKEGSCSVRIGSLKAKCIEFSLAILYIILVTIF 251


>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
           gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
           [Ricinus communis]
          Length = 1235

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/109 (47%), Positives = 64/109 (58%)
 Frame = +3

Query: 3   GAKNFKELFTFLGKQAILNAPGSPYAINFRSAVDESSAMKLMNTTTYXXXXXXXXXXXXX 182
           GA+NF+E FTF+G++A  N PGSPYAI F+SA   SS MK MN +TY             
Sbjct: 144 GAQNFREWFTFIGRRAAPNLPGSPYAITFKSAAPASSGMKPMNVSTYSCGDVSLGCSCGD 203

Query: 183 XXXXXXXXXXXXXXXQKTGSCSVRIGSLKARCIEFAVAILYILLVSLFL 329
                           +  SCSVR GSLKA+CI+FA+ ILYILLVS+ L
Sbjct: 204 CPTAPICANTAPHSQHERASCSVRFGSLKAKCIDFALTILYILLVSMLL 252


>ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana]
           gi|332661517|gb|AEE86917.1| Patched family protein
           [Arabidopsis thaliana]
          Length = 1297

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/108 (44%), Positives = 62/108 (57%)
 Frame = +3

Query: 3   GAKNFKELFTFLGKQAILNAPGSPYAINFRSAVDESSAMKLMNTTTYXXXXXXXXXXXXX 182
           GAKNF+E FTF+G++A    PGSPYAINF+S++ ESSAM  MN + Y             
Sbjct: 183 GAKNFREWFTFIGQKAPSGFPGSPYAINFKSSIPESSAMVPMNVSVYSCGDTSLGCSCGD 242

Query: 183 XXXXXXXXXXXXXXXQKTGSCSVRIGSLKARCIEFAVAILYILLVSLF 326
                              SCS+RIG LK RCIE ++A++Y+LLVS F
Sbjct: 243 CPSSPACSSPEPLPPHDEDSCSIRIGPLKVRCIELSMALVYVLLVSCF 290


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