BLASTX nr result

ID: Cnidium21_contig00023969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023969
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycin...   152   9e-35
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin...   149   6e-34
gb|AFK48773.1| unknown [Lotus japonicus]                              149   7e-34
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa...   148   9e-34
gb|AFK47118.1| unknown [Lotus japonicus]                              148   9e-34

>ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
           gi|255627057|gb|ACU13873.1| unknown [Glycine max]
          Length = 143

 Score =  152 bits (383), Expect = 9e-35
 Identities = 75/116 (64%), Positives = 97/116 (83%), Gaps = 2/116 (1%)
 Frame = -2

Query: 593 MAFYNKLGSIMRQSNGHISSVP--SMLNAIRAMSSSKLFIGGLSYQVNEESLREAFSSFG 420
           MAF NK+G+++RQ     +  P  SMLN IR MSSSKLFIGGLSY V+++SL++AFS FG
Sbjct: 1   MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60

Query: 419 DVDEAKIITDRDSGRSKGFGFVTFADSEAASTAMTAMDGQPLNGRNIHVSFANDKP 252
           DV +AK+ITDRDSGRS+GFGFV F++ E+AS+A++AMDG+ LNGR+I VS+ANDKP
Sbjct: 61  DVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDKP 116


>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
           gi|255631812|gb|ACU16273.1| unknown [Glycine max]
          Length = 138

 Score =  149 bits (376), Expect = 6e-34
 Identities = 73/116 (62%), Positives = 97/116 (83%), Gaps = 2/116 (1%)
 Frame = -2

Query: 593 MAFYNKLGSIMRQSNGHISSVP--SMLNAIRAMSSSKLFIGGLSYQVNEESLREAFSSFG 420
           MAF NK+G+++RQ     +  P  SMLN IR MSSSKLFIGGLSY V+++SL++AFS FG
Sbjct: 1   MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60

Query: 419 DVDEAKIITDRDSGRSKGFGFVTFADSEAASTAMTAMDGQPLNGRNIHVSFANDKP 252
           DV +AK+ITDRDSGRS+GFGFV F++ E+AS+A++AMDG+ L+GR+I VS+AND+P
Sbjct: 61  DVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDRP 116


>gb|AFK48773.1| unknown [Lotus japonicus]
          Length = 146

 Score =  149 bits (375), Expect = 7e-34
 Identities = 74/116 (63%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
 Frame = -2

Query: 593 MAFYNKLGSIMRQSNGHISSVP--SMLNAIRAMSSSKLFIGGLSYQVNEESLREAFSSFG 420
           MAF NK+G+++RQ+    S  P  SMLN IR MSSSKLFIGGLSY V+++SL +AFSSFG
Sbjct: 1   MAFLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFG 60

Query: 419 DVDEAKIITDRDSGRSKGFGFVTFADSEAASTAMTAMDGQPLNGRNIHVSFANDKP 252
            V EA++I DRD+GRS+GFGFV+F   E+AS+A+++MDGQ LNGRNI VS+AND+P
Sbjct: 61  TVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDRP 116


>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
           gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
           protein [Pisum sativum]
          Length = 146

 Score =  148 bits (374), Expect = 9e-34
 Identities = 73/116 (62%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
 Frame = -2

Query: 593 MAFYNKLGSIMRQSNGHISSVP--SMLNAIRAMSSSKLFIGGLSYQVNEESLREAFSSFG 420
           MAF NKLG+++RQ     S  P  SMLN +R MSSSKLFIGGLSY V+++SL++AF+S+G
Sbjct: 1   MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG 60

Query: 419 DVDEAKIITDRDSGRSKGFGFVTFADSEAASTAMTAMDGQPLNGRNIHVSFANDKP 252
           +V EA++ITDRD+GRS+GFGFV F   E+A++A++AMDGQ LNGRNI VS+AND+P
Sbjct: 61  EVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRP 116


>gb|AFK47118.1| unknown [Lotus japonicus]
          Length = 146

 Score =  148 bits (374), Expect = 9e-34
 Identities = 74/116 (63%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
 Frame = -2

Query: 593 MAFYNKLGSIMRQSNGHISSVP--SMLNAIRAMSSSKLFIGGLSYQVNEESLREAFSSFG 420
           MAF NK+G+++RQ     S  P  SMLN IR MSSSKLFIGGLSY V+++SL +AFSSFG
Sbjct: 1   MAFLNKVGNVLRQGAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFG 60

Query: 419 DVDEAKIITDRDSGRSKGFGFVTFADSEAASTAMTAMDGQPLNGRNIHVSFANDKP 252
            V EA++I DRD+GRS+GFGFV+F   E+AS+A+++MDGQ LNGRNI VS+AND+P
Sbjct: 61  TVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDRP 116


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