BLASTX nr result

ID: Cnidium21_contig00023967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023967
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001756771.1| predicted protein [Physcomitrella patens sub...    48   3e-08
ref|XP_003518860.1| PREDICTED: uncharacterized protein LOC100806...    49   4e-08
ref|XP_002330275.1| predicted protein [Populus trichocarpa] gi|2...    49   5e-08
dbj|BAJ90415.1| predicted protein [Hordeum vulgare subsp. vulgar...    47   5e-08
gb|ABK95609.1| unknown [Populus trichocarpa]                           49   5e-08

>ref|XP_001756771.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162692009|gb|EDQ78368.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 535

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = +1

Query: 568 TPKRIKEWMKISDLTIDEIKSHLQKYKHHCRQGGAS 675
           TPK+I+E MK+  LT DE+KSHLQKY+ H R+  +S
Sbjct: 321 TPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSSS 356



 Score = 36.6 bits (83), Expect(2) = 3e-08
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +2

Query: 413 DPSRKPRRYWSAELHEHFVRAVKHLGPS 496
           +PSRK RR WS ELH  FV A+  LG S
Sbjct: 290 NPSRKARRCWSPELHRLFVNALHQLGGS 317


>ref|XP_003518860.1| PREDICTED: uncharacterized protein LOC100806237 [Glycine max]
          Length = 414

 Score = 48.9 bits (115), Expect(2) = 4e-08
 Identities = 22/41 (53%), Positives = 31/41 (75%)
 Frame = +1

Query: 568 TPKRIKEWMKISDLTIDEIKSHLQKYKHHCRQGGASTSTVP 690
           TPK+I+E M++  LT DE+KSHLQKY+ H R+  A++S  P
Sbjct: 299 TPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAASSNQP 339



 Score = 35.0 bits (79), Expect(2) = 4e-08
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
 Frame = +2

Query: 287 KFDKSEG-SSRLFQMPSLTIKESSQQR------NDSVTSTYPQFTP------YVNDPSRK 427
           K +K E   +RL  +   ++KE    R      N +V+S+ P           +   +RK
Sbjct: 213 KEEKEESVMNRLSLLTPSSVKEGCGSRGSRSSSNRAVSSSSPPMVQPSLRATSLQQTARK 272

Query: 428 PRRYWSAELHEHFVRAVKHLGPS 496
            RR WS ELH  FV A++ LG S
Sbjct: 273 QRRCWSPELHRRFVNALQKLGGS 295


>ref|XP_002330275.1| predicted protein [Populus trichocarpa] gi|222871310|gb|EEF08441.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 49.3 bits (116), Expect(2) = 5e-08
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = +1

Query: 568 TPKRIKEWMKISDLTIDEIKSHLQKYKHHCRQGGASTSTVPSS 696
           TPK+I+E M++  LT DE+KSHLQKY+ H R+   +T++ P++
Sbjct: 303 TPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPPATASAPAN 345



 Score = 34.3 bits (77), Expect(2) = 5e-08
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +2

Query: 419 SRKPRRYWSAELHEHFVRAVKHLG 490
           SRK RR WS ELH  FV A++ LG
Sbjct: 274 SRKHRRCWSPELHRQFVNALQQLG 297


>dbj|BAJ90415.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326496919|dbj|BAJ98486.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326517392|dbj|BAK00063.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 336

 Score = 47.0 bits (110), Expect(2) = 5e-08
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = +1

Query: 568 TPKRIKEWMKISDLTIDEIKSHLQKYKHHCRQGGASTS 681
           TPK+I+E MK+  LT DE+KSHLQKY+ H ++  +S+S
Sbjct: 240 TPKQIREVMKVDGLTNDEVKSHLQKYRLHNQRSPSSSS 277



 Score = 36.6 bits (83), Expect(2) = 5e-08
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +2

Query: 419 SRKPRRYWSAELHEHFVRAVKHLG 490
           SRK RR WS ELH HFV A+  LG
Sbjct: 211 SRKTRRCWSPELHRHFVAALHQLG 234


>gb|ABK95609.1| unknown [Populus trichocarpa]
          Length = 221

 Score = 49.3 bits (116), Expect(2) = 5e-08
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = +1

Query: 568 TPKRIKEWMKISDLTIDEIKSHLQKYKHHCRQGGASTSTVPSS 696
           TPK+I+E M++  LT DE+KSHLQKY+ H R+   +T++ P++
Sbjct: 104 TPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPPATASAPAN 146



 Score = 34.3 bits (77), Expect(2) = 5e-08
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +2

Query: 419 SRKPRRYWSAELHEHFVRAVKHLG 490
           SRK RR WS ELH  FV A++ LG
Sbjct: 75  SRKHRRCWSPELHRQFVNALQQLG 98


Top