BLASTX nr result

ID: Cnidium21_contig00023953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023953
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis ...   203   1e-50
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...   203   1e-50
ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   202   2e-50
ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...   202   2e-50
ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50

>ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis lyrata subsp. lyrata]
           gi|297319106|gb|EFH49528.1| ubiquitin-specific protease
           12 [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score =  203 bits (516), Expect = 1e-50
 Identities = 100/108 (92%), Positives = 103/108 (95%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   LQLDVKGCGDIYASFDKYVEVERLEGDNKYYAEEHGLQDAKKGVLFSNFPPVLQLQLKRF 181
           LQLDVKGC D+YASFDKYVEVERLEGDNKY+AE HGLQDAKKGVLF +FPPVLQLQLKRF
Sbjct: 336 LQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRF 395

Query: 182 EYDFMRDTMVKINDRYEFPLE--LDRENGKYLSPDADRSVRNLYTLHS 319
           EYDFMRDTMVKINDRYEFPLE  LDRENGKYLSPDADRSVRNLYTLHS
Sbjct: 396 EYDFMRDTMVKINDRYEFPLELDLDRENGKYLSPDADRSVRNLYTLHS 443


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1120

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/108 (91%), Positives = 104/108 (96%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   LQLDVKGCGDIYASFDKYVEVERLEGDNKYYAEEHGLQDAKKGVLFSNFPPVLQLQLKRF 181
           LQLDVKGC D+YASFDKYVEVERLEGDNKY+AEEHGLQDAKKGVLF +FPPVLQLQLKRF
Sbjct: 333 LQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRF 392

Query: 182 EYDFMRDTMVKINDRYEFP--LELDRENGKYLSPDADRSVRNLYTLHS 319
           EYDFMRDTMVKINDRYEFP  L+LDRENGKYLSP+ADRSVRNLYTLHS
Sbjct: 393 EYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHS 440


>ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
           sativus]
          Length = 466

 Score =  202 bits (514), Expect = 2e-50
 Identities = 98/108 (90%), Positives = 104/108 (96%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   LQLDVKGCGDIYASFDKYVEVERLEGDNKYYAEEHGLQDAKKGVLFSNFPPVLQLQLKRF 181
           LQLDVKGC D+YASFDKYVEVERLEGDNKY+AEEHGLQ+AKKGVLF +FPPVLQLQLKRF
Sbjct: 332 LQLDVKGCNDVYASFDKYVEVERLEGDNKYHAEEHGLQEAKKGVLFIDFPPVLQLQLKRF 391

Query: 182 EYDFMRDTMVKINDRYEFP--LELDRENGKYLSPDADRSVRNLYTLHS 319
           EYDFMRDTMVKINDRYEFP  L+LDRENGKYLSP+ADRSVRNLYTLHS
Sbjct: 392 EYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHS 439


>ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 12-like [Cucumis sativus]
          Length = 1110

 Score =  202 bits (514), Expect = 2e-50
 Identities = 98/108 (90%), Positives = 104/108 (96%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   LQLDVKGCGDIYASFDKYVEVERLEGDNKYYAEEHGLQDAKKGVLFSNFPPVLQLQLKRF 181
           LQLDVKGC D+YASFDKYVEVERLEGDNKY+AEEHGLQ+AKKGVLF +FPPVLQLQLKRF
Sbjct: 332 LQLDVKGCNDVYASFDKYVEVERLEGDNKYHAEEHGLQEAKKGVLFIDFPPVLQLQLKRF 391

Query: 182 EYDFMRDTMVKINDRYEFP--LELDRENGKYLSPDADRSVRNLYTLHS 319
           EYDFMRDTMVKINDRYEFP  L+LDRENGKYLSP+ADRSVRNLYTLHS
Sbjct: 392 EYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHS 439


>ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|222867383|gb|EEF04514.1|
           predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  202 bits (513), Expect = 3e-50
 Identities = 98/108 (90%), Positives = 104/108 (96%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   LQLDVKGCGDIYASFDKYVEVERLEGDNKYYAEEHGLQDAKKGVLFSNFPPVLQLQLKRF 181
           LQLDVKGC D+YASFDKYVEVERLEGDNKY+AEEHGLQDAKKGVLF +FPPVLQLQLKRF
Sbjct: 334 LQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRF 393

Query: 182 EYDFMRDTMVKINDRYEFP--LELDRENGKYLSPDADRSVRNLYTLHS 319
           EYDFMRDTMVKINDRYEFP  L+LDRENGKYLSP++DRSVRNLYTLHS
Sbjct: 394 EYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPESDRSVRNLYTLHS 441


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