BLASTX nr result

ID: Cnidium21_contig00023925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023925
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19296.3| unnamed protein product [Vitis vinifera]              164   7e-39
ref|XP_002285630.1| PREDICTED: transcription initiation factor I...   164   7e-39
ref|XP_004138655.1| PREDICTED: transcription initiation factor I...   164   9e-39
ref|XP_003519205.1| PREDICTED: transcription initiation factor I...   163   2e-38
ref|XP_002527359.1| transcription initiation factor iia (tfiia),...   162   3e-38

>emb|CBI19296.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  164 bits (415), Expect = 7e-39
 Identities = 81/87 (93%), Positives = 83/87 (95%)
 Frame = +1

Query: 1   LDEMVDNGVLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD 180
           LDEMV NG LSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD
Sbjct: 77  LDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD 136

Query: 181 AVFKNEDSSETVGRVKIVACDSKLLTQ 261
           A+FKNE+S E VGRVKIVACDSKLLTQ
Sbjct: 137 ALFKNEESQENVGRVKIVACDSKLLTQ 163


>ref|XP_002285630.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
           [Vitis vinifera] gi|359492969|ref|XP_003634490.1|
           PREDICTED: transcription initiation factor IIA subunit 2
           isoform 2 [Vitis vinifera] gi|147775910|emb|CAN60284.1|
           hypothetical protein VITISV_015528 [Vitis vinifera]
          Length = 106

 Score =  164 bits (415), Expect = 7e-39
 Identities = 81/87 (93%), Positives = 83/87 (95%)
 Frame = +1

Query: 1   LDEMVDNGVLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD 180
           LDEMV NG LSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD
Sbjct: 20  LDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD 79

Query: 181 AVFKNEDSSETVGRVKIVACDSKLLTQ 261
           A+FKNE+S E VGRVKIVACDSKLLTQ
Sbjct: 80  ALFKNEESQENVGRVKIVACDSKLLTQ 106


>ref|XP_004138655.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Cucumis sativus] gi|449490144|ref|XP_004158520.1|
           PREDICTED: transcription initiation factor IIA subunit
           2-like [Cucumis sativus]
          Length = 106

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/87 (91%), Positives = 83/87 (95%)
 Frame = +1

Query: 1   LDEMVDNGVLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD 180
           LDEMV NG LSPELAIQVLVQFDKSMTEALESQVKSKVT+KGHLHTYRFCDNVWTFILQD
Sbjct: 20  LDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTVKGHLHTYRFCDNVWTFILQD 79

Query: 181 AVFKNEDSSETVGRVKIVACDSKLLTQ 261
           A FKNEDSSE VGR+KIVACDSKLL+Q
Sbjct: 80  ASFKNEDSSENVGRIKIVACDSKLLSQ 106


>ref|XP_003519205.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Glycine max]
          Length = 106

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/87 (91%), Positives = 83/87 (95%)
 Frame = +1

Query: 1   LDEMVDNGVLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD 180
           LDEMV NG LSPELAIQVLVQFDKSMTEALE+QVKSKV+IKGHLHTYRFCDNVWTFILQD
Sbjct: 20  LDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQD 79

Query: 181 AVFKNEDSSETVGRVKIVACDSKLLTQ 261
           A+FKNEDS E VGRVKIVACDSKLLTQ
Sbjct: 80  ALFKNEDSQENVGRVKIVACDSKLLTQ 106


>ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
           [Ricinus communis] gi|223533278|gb|EEF35031.1|
           transcription initiation factor iia (tfiia), gamma
           chain, putative [Ricinus communis]
          Length = 106

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/87 (91%), Positives = 83/87 (95%)
 Frame = +1

Query: 1   LDEMVDNGVLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQD 180
           LDEMV +G LSPELAIQVLVQFDKSMTEALESQVKSKV+IKGHLHTYRFCDNVWTFILQD
Sbjct: 20  LDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQD 79

Query: 181 AVFKNEDSSETVGRVKIVACDSKLLTQ 261
           A+FKNEDS E VGRVKIVACDSKLLTQ
Sbjct: 80  ALFKNEDSQENVGRVKIVACDSKLLTQ 106


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