BLASTX nr result

ID: Cnidium21_contig00023919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023919
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15533.3| unnamed protein product [Vitis vinifera]               97   5e-18
ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2...    97   5e-18
ref|XP_003525200.1| PREDICTED: peroxisome biogenesis protein 3-2...    96   9e-18
ref|XP_003530946.1| PREDICTED: peroxisome biogenesis protein 3-2...    94   4e-17
gb|ACU20085.1| unknown [Glycine max]                                   94   4e-17

>emb|CBI15533.3| unnamed protein product [Vitis vinifera]
          Length = 166

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = -2

Query: 464 VLSSDEFQSIVDVSLKAVVDELVQDMKNQP--GNINLTGVPLAKLLPKVAHMGPLLLQEP 291
           VLSS EF +++DVSL+ VVD +V+DM      G    +G+ LAKLLP+VA MGPLLL+EP
Sbjct: 78  VLSSAEFINVIDVSLRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEP 137

Query: 290 SKNKFIHIVRNLPVAEVFFTLVYANTP 210
           SKN+FI I++  P  E FFTL+YAN P
Sbjct: 138 SKNRFIQIIQKAPEVEFFFTLLYANMP 164



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -1

Query: 768 KRLKDLFTTSVLHETIMQILDVFMSIGSPHQWVEYLMPKDLK-YKSAAFSSND 613
           K+L+D+F + VLH TIMQILD+F+S G PH  V+YLMP D K YK A+ S+ D
Sbjct: 6   KQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVDYLMPDDTKSYKPASPSNGD 58


>ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2 [Vitis vinifera]
           gi|297734292|emb|CBI15539.3| unnamed protein product
           [Vitis vinifera]
          Length = 373

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = -2

Query: 464 VLSSDEFQSIVDVSLKAVVDELVQDMKNQP--GNINLTGVPLAKLLPKVAHMGPLLLQEP 291
           VLSS EF +++DVSL+ VVD +V+DM      G    +G+ LAKLLP+VA MGPLLL+EP
Sbjct: 285 VLSSAEFINVIDVSLRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEP 344

Query: 290 SKNKFIHIVRNLPVAEVFFTLVYANTP 210
           SKN+FI I++  P  E FFTL+YAN P
Sbjct: 345 SKNRFIQIIQKAPEVEFFFTLLYANMP 371



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -1

Query: 768 KRLKDLFTTSVLHETIMQILDVFMSIGSPHQWVEYLMPKDLK-YKSAAFSSND 613
           K+L+D+F + VLH TIMQILD+F+S G PH  V+YLMP D K YK A+ S+ D
Sbjct: 213 KQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVDYLMPDDTKSYKPASPSNGD 265


>ref|XP_003525200.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Glycine max]
          Length = 369

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = -2

Query: 464 VLSSDEFQSIVDVSLKAVVDELVQDMKNQ-PGNINLTGVPLAKLLPKVAHMGPLLLQEPS 288
           VLSS EF SIV++SLKAVVD LV+ M+ +  G     G+PLA++LP+VA M PLLL EPS
Sbjct: 282 VLSSAEFGSIVEISLKAVVDTLVELMRTKFSGGSVAEGMPLARVLPQVAQMCPLLLGEPS 341

Query: 287 KNKFIHIVRNLPVAEVFFTLVYANTP 210
           KN+FI I++N+   E+FFTL+YAN P
Sbjct: 342 KNQFIQIIKNIQEVELFFTLLYANMP 367



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 24/52 (46%), Positives = 39/52 (75%)
 Frame = -1

Query: 768 KRLKDLFTTSVLHETIMQILDVFMSIGSPHQWVEYLMPKDLKYKSAAFSSND 613
           K+L   F ++ LHETIMQIL+ FMS+G+P+ W++Y++P+D++  S    S+D
Sbjct: 212 KQLSTFFNSTTLHETIMQILNTFMSMGTPNSWIKYMIPEDVRPYSTTSGSDD 263


>ref|XP_003530946.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Glycine max]
          Length = 369

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = -2

Query: 464 VLSSDEFQSIVDVSLKAVVDELVQDMKNQ-PGNINLTGVPLAKLLPKVAHMGPLLLQEPS 288
           VLSS EF SIV++SLKAVVD LV+ M  +  G     G+PLA++LP+VA M PLLL+EP 
Sbjct: 282 VLSSAEFGSIVEISLKAVVDTLVELMGTKFSGGSVAGGLPLARVLPQVAQMCPLLLEEPR 341

Query: 287 KNKFIHIVRNLPVAEVFFTLVYANTP 210
           KN+FI I++N+   E+FFTL+YAN P
Sbjct: 342 KNQFIQIIKNIQEVELFFTLLYANMP 367



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 24/52 (46%), Positives = 40/52 (76%)
 Frame = -1

Query: 768 KRLKDLFTTSVLHETIMQILDVFMSIGSPHQWVEYLMPKDLKYKSAAFSSND 613
           K+L   F ++ LHETIMQIL+ FMS+G+P+ W++Y++P+D++  S  + S+D
Sbjct: 212 KQLSTFFNSTTLHETIMQILNSFMSMGTPNSWIKYMIPEDVRPYSTTYGSDD 263


>gb|ACU20085.1| unknown [Glycine max]
          Length = 369

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = -2

Query: 464 VLSSDEFQSIVDVSLKAVVDELVQDMKNQ-PGNINLTGVPLAKLLPKVAHMGPLLLQEPS 288
           VLSS EF SIV++SLKAVVD LV+ M  +  G     G+PLA++LP+VA M PLLL+EP 
Sbjct: 282 VLSSAEFGSIVEISLKAVVDTLVELMGTKFSGGSVAGGLPLARVLPQVAQMCPLLLEEPR 341

Query: 287 KNKFIHIVRNLPVAEVFFTLVYANTP 210
           KN+FI I++N+   E+FFTL+YAN P
Sbjct: 342 KNQFIQIIKNIQEVELFFTLLYANMP 367



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 24/52 (46%), Positives = 39/52 (75%)
 Frame = -1

Query: 768 KRLKDLFTTSVLHETIMQILDVFMSIGSPHQWVEYLMPKDLKYKSAAFSSND 613
           K+L   F ++ LHETIMQIL+ FMS+G+P+ W++Y++P+D++  S    S+D
Sbjct: 212 KQLSTFFNSTTLHETIMQILNSFMSMGTPNSWIKYMIPEDVRPYSTTHGSDD 263


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