BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023911
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    79   3e-13
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   75   4e-12
gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]              74   2e-11
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    73   2e-11
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...    71   1e-10

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/76 (48%), Positives = 46/76 (60%)
 Frame = +3

Query: 42  WNSIRTVGVPPDWTKVVWFPLAIQKCSFTLWLALKNRLLTKTRMQQFGMNTDTKCVLCHN 221
           WN IRTV     W K VWF  AI K +F +WLA+ NRL T  RM  + M  D  C+LC+ 
Sbjct: 293 WNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNK 352

Query: 222 ADETVKHIFCTCPFVT 269
           A E+  H+F +CPF T
Sbjct: 353 ALESRDHLFFSCPFAT 368


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = +3

Query: 42  WNSIRTVGVPPDWTKVVWFPLAIQKCSFTLWLALKNRLLTKTRMQQFGMNTDTKCVLCHN 221
           WN  RTV V   W+ +VWFPLAI + +F  W  +  RL TK R+QQ+G+ +D  C LC  
Sbjct: 416 WNLTRTVHVIAPWSSIVWFPLAIPRHAFLHWQVMLFRLPTKDRLQQWGITSDATCRLCDG 475

Query: 222 ADETVKHIFCTCPFVT 269
            DE+ +H+F  C + +
Sbjct: 476 EDESHQHLFFGCTYAS 491


>gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]
          Length = 236

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/75 (45%), Positives = 44/75 (58%)
 Frame = +3

Query: 45  NSIRTVGVPPDWTKVVWFPLAIQKCSFTLWLALKNRLLTKTRMQQFGMNTDTKCVLCHNA 224
           N +RT+ +  DW K VWF  +  K SF +WLA+ NRL T  RM  +       CVLCHNA
Sbjct: 91  NHMRTISMDVDWYKGVWFGHSTPKYSFCVWLAVLNRLSTGDRMTHWNGGQSAACVLCHNA 150

Query: 225 DETVKHIFCTCPFVT 269
            ET  H+F +C F +
Sbjct: 151 PETRDHLFFSCDFAS 165


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/78 (39%), Positives = 47/78 (60%)
 Frame = +3

Query: 36   IIWNSIRTVGVPPDWTKVVWFPLAIQKCSFTLWLALKNRLLTKTRMQQFGMNTDTKCVLC 215
            + WN++RT     +W K VWFP +  K SF LWL ++NRL T  R++ +       C LC
Sbjct: 1340 VTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLC 1399

Query: 216  HNADETVKHIFCTCPFVT 269
            +NA+ET  H+F +C + +
Sbjct: 1400 NNAEETRDHLFFSCQYTS 1417


>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/74 (43%), Positives = 42/74 (56%)
 Frame = +3

Query: 42  WNSIRTVGVPPDWTKVVWFPLAIQKCSFTLWLALKNRLLTKTRMQQFGMNTDTKCVLCHN 221
           W + R   +  +W K VWF  A  K S   W+A+KNRL T  RM  +    D+ CVLCH+
Sbjct: 272 WAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHH 331

Query: 222 ADETVKHIFCTCPF 263
             ET  H+F TCP+
Sbjct: 332 LVETRDHLFFTCPY 345