BLASTX nr result

ID: Cnidium21_contig00023897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023897
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCA...   179   4e-43
emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]   179   4e-43
gb|ABD65169.1| hypothetical protein 40.t00056 [Brassica oleracea]     169   3e-40
ref|NP_193515.1| putative AT-hook DNA-binding family protein [Ar...   169   3e-40
gb|ABD65635.1| hypothetical protein 23.t00073 [Brassica oleracea]     168   6e-40

>ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 282

 Score =  179 bits (453), Expect = 4e-43
 Identities = 97/138 (70%), Positives = 103/138 (74%), Gaps = 8/138 (5%)
 Frame = +2

Query: 2   TLQGRFEILSLSGSFLPPPAPPGATSLTIFLAXXXXXXXXXXXXXELTAAGPVIVIASSF 181
           TL GRFEILSLSGSFLPPPAPPGATSLTIFLA             ELTAAGPVIVIA+SF
Sbjct: 150 TLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASF 209

Query: 182 TNVAYERLPLEDQEETLQMQ--------GGNGSVHNSTNPFPDPSSGLPFLNLPINMPPN 337
           TNVAYERLPL D+EE LQMQ        GG G ++   NPFPDPS+GLPF NLP+NM PN
Sbjct: 210 TNVAYERLPL-DEEEPLQMQQQVPQSSGGGGGGIN---NPFPDPSAGLPFFNLPLNM-PN 264

Query: 338 VQLPVDAWPGNSGGRPPF 391
            QLPVD W GNSG RPPF
Sbjct: 265 CQLPVDGWAGNSGARPPF 282


>emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]
          Length = 282

 Score =  179 bits (453), Expect = 4e-43
 Identities = 97/138 (70%), Positives = 103/138 (74%), Gaps = 8/138 (5%)
 Frame = +2

Query: 2   TLQGRFEILSLSGSFLPPPAPPGATSLTIFLAXXXXXXXXXXXXXELTAAGPVIVIASSF 181
           TL GRFEILSLSGSFLPPPAPPGATSLTIFLA             ELTAAGPVIVIA+SF
Sbjct: 150 TLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASF 209

Query: 182 TNVAYERLPLEDQEETLQMQ--------GGNGSVHNSTNPFPDPSSGLPFLNLPINMPPN 337
           TNVAYERLPL D+EE LQMQ        GG G ++   NPFPDPS+GLPF NLP+NM PN
Sbjct: 210 TNVAYERLPL-DEEEPLQMQQQVPQSSGGGGGGIN---NPFPDPSAGLPFFNLPLNM-PN 264

Query: 338 VQLPVDAWPGNSGGRPPF 391
            QLPVD W GNSG RPPF
Sbjct: 265 CQLPVDGWAGNSGARPPF 282


>gb|ABD65169.1| hypothetical protein 40.t00056 [Brassica oleracea]
          Length = 293

 Score =  169 bits (429), Expect = 3e-40
 Identities = 89/134 (66%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
 Frame = +2

Query: 2   TLQGRFEILSLSGSFLPPPAPPGATSLTIFLAXXXXXXXXXXXXXELTAAGPVIVIASSF 181
           TLQG FEILSLSGSFLPPPAPPGATSLTIF+A             ELTAAGPVIVIA+SF
Sbjct: 162 TLQGTFEILSLSGSFLPPPAPPGATSLTIFVAGGQGQVIGGSVVGELTAAGPVIVIAASF 221

Query: 182 TNVAYERLPLEDQEETLQMQGGNGSVHNSTNPFPDPS----SGLPFLNLPINMPPNVQLP 349
           TNVAYERLPLE+ E+  Q  GG G  +   N FP+ +     GLPF NLP+NM PNVQLP
Sbjct: 222 TNVAYERLPLEEDEQ--QHLGGGGGANGGGNLFPEVAGGGGGGLPFFNLPMNMQPNVQLP 279

Query: 350 VDAWPGNSGGRPPF 391
           V+ WPGNSGGR PF
Sbjct: 280 VEGWPGNSGGRGPF 293


>ref|NP_193515.1| putative AT-hook DNA-binding family protein [Arabidopsis thaliana]
           gi|17933299|gb|AAL48232.1|AF446359_1 AT4g17800/dl4935c
           [Arabidopsis thaliana] gi|2245139|emb|CAB10560.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|7268533|emb|CAB78783.1| hypothetical protein
           [Arabidopsis thaliana] gi|20453387|gb|AAM19932.1|
           AT4g17800/dl4935c [Arabidopsis thaliana]
           gi|119657390|tpd|FAA00294.1| TPA: AT-hook motif nuclear
           localized protein 23 [Arabidopsis thaliana]
           gi|332658552|gb|AEE83952.1| putative AT-hook DNA-binding
           family protein [Arabidopsis thaliana]
          Length = 292

 Score =  169 bits (428), Expect = 3e-40
 Identities = 89/134 (66%), Positives = 100/134 (74%), Gaps = 4/134 (2%)
 Frame = +2

Query: 2   TLQGRFEILSLSGSFLPPPAPPGATSLTIFLAXXXXXXXXXXXXXELTAAGPVIVIASSF 181
           TLQG FEILSLSGSFLPPPAPPGATSLTIFLA             ELTAAGPVIVIA+SF
Sbjct: 162 TLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASF 221

Query: 182 TNVAYERLPLEDQEETLQMQGGNGSVHNSTNPFPDPSS----GLPFLNLPINMPPNVQLP 349
           TNVAYERLPLE+ E+  Q+ GG+   +   N FP+ ++    GLPF NLP+NM PNVQLP
Sbjct: 222 TNVAYERLPLEEDEQQQQLGGGS---NGGGNLFPEVAAGGGGGLPFFNLPMNMQPNVQLP 278

Query: 350 VDAWPGNSGGRPPF 391
           V+ WPGNSGGR PF
Sbjct: 279 VEGWPGNSGGRGPF 292


>gb|ABD65635.1| hypothetical protein 23.t00073 [Brassica oleracea]
          Length = 292

 Score =  168 bits (426), Expect = 6e-40
 Identities = 90/134 (67%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
 Frame = +2

Query: 2   TLQGRFEILSLSGSFLPPPAPPGATSLTIFLAXXXXXXXXXXXXXELTAAGPVIVIASSF 181
           TLQG FEILSLSGSFLPPPAPPGATSLTIF+A             ELTAAGPVIVIASSF
Sbjct: 161 TLQGTFEILSLSGSFLPPPAPPGATSLTIFVAGGQGQVVGGSVVGELTAAGPVIVIASSF 220

Query: 182 TNVAYERLPLEDQEETLQMQGGNGSVHNSTNPFPDPSS----GLPFLNLPINMPPNVQLP 349
           TNVAYERLPLE+ E+  Q  GG G  +   N FP+ S+    GLPF NLP+NM  NVQLP
Sbjct: 221 TNVAYERLPLEEDEQ--QHLGGGGGSNGGGNLFPEVSAGGGGGLPFFNLPMNMQSNVQLP 278

Query: 350 VDAWPGNSGGRPPF 391
           V+ WPGNSGGR PF
Sbjct: 279 VEGWPGNSGGRGPF 292


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