BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023885
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   174   5e-42
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...   170   1e-40
ref|XP_002871218.1| pentatricopeptide repeat-containing protein ...   164   7e-39

>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/127 (66%), Positives = 102/127 (80%)
 Frame = -2

Query: 453  LEKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSM 274
            +EKA+Q+ ++MQ + CEPTVVTYSALIRGYM + +  +AWSV + +KLKG  PDF TYSM
Sbjct: 946  IEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSM 1005

Query: 273  FITCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHMKSNVT 94
            FI+CLCK GKSEEALQLLS M+  GI PST+NFRTV FGLN EGK DLARTV+  K  + 
Sbjct: 1006 FISCLCKAGKSEEALQLLSRMLEDGIVPSTINFRTVFFGLNCEGKNDLARTVMQQKLALK 1065

Query: 93   SRRKFVT 73
            S+RKF+T
Sbjct: 1066 SKRKFLT 1072



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/115 (30%), Positives = 62/115 (53%)
 Frame = -2

Query: 450 EKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMF 271
           +K  ++  EM +       V   A++  ++    + EAW VF+ MK KG  P + +YS+F
Sbjct: 471 DKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSIF 530

Query: 270 ITCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHMK 106
           I  LC+V +++E L++L +M AS IF +   F      + ++G+ D  + V  M+
Sbjct: 531 IKELCRVSRTDEILKVLYKMQASKIFINNDIFNLAIAFMEKKGEVDNVQKVKQMQ 585



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/76 (38%), Positives = 38/76 (50%)
 Frame = -2

Query: 435 MVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMFITCLC 256
           +V+EM+   CE  + T+S LI  +     +G+A   F  MK  G  PD   Y M +  LC
Sbjct: 232 LVEEMEKNSCEKDIKTWSILISQFGKAKLIGKALLFFEKMKTSGCEPDEKIYKMMVHSLC 291

Query: 255 KVGKSEEALQLLSEMV 208
             GK E AL    EMV
Sbjct: 292 NAGKGEVALAFYKEMV 307


>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/123 (69%), Positives = 100/123 (81%)
 Frame = -2

Query: 447  KALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMFI 268
            KAL++ + M+ E CEPT+VTYSALIRGYM    V EAW+VFH +K KG APDF TYSMF+
Sbjct: 925  KALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFL 984

Query: 267  TCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHMKSNVTSR 88
            +CLC+ GKSEEALQLLS+MV +GI PS VNFRTV FGLNREGKQ LA+TVL  K  +TS+
Sbjct: 985  SCLCRAGKSEEALQLLSDMVDNGIVPSNVNFRTVFFGLNREGKQSLAQTVLQKKWALTSK 1044

Query: 87   RKF 79
            RKF
Sbjct: 1045 RKF 1047



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/114 (33%), Positives = 62/114 (54%)
 Frame = -2

Query: 450 EKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMF 271
           +K  ++  EM +   E   V   A++ G++    + EAW VF  M+ KG  P + +YS+F
Sbjct: 465 QKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIKPTWKSYSIF 524

Query: 270 ITCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHM 109
           I  LCKV +++E +++L +M AS +F     F  V   + R+G+ D  R V  M
Sbjct: 525 IKELCKVLRTDEIIKVLGKMQASKMFICDEIFEWVISCMERKGEMDNIRKVKQM 578


>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/123 (69%), Positives = 100/123 (81%)
 Frame = -2

Query: 447  KALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMFI 268
            KAL++ + M+ E CEPT+VTYSALIRGYM    V EAW+VFH +K KG APDF TYSMF+
Sbjct: 925  KALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFL 984

Query: 267  TCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHMKSNVTSR 88
            +CLC+ GKSEEALQLLS+MV +GI PS VNFRTV FGLNREGKQ LA+TVL  K  +TS+
Sbjct: 985  SCLCRAGKSEEALQLLSDMVDNGIVPSNVNFRTVFFGLNREGKQSLAQTVLQKKWALTSK 1044

Query: 87   RKF 79
            RKF
Sbjct: 1045 RKF 1047



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/114 (33%), Positives = 62/114 (54%)
 Frame = -2

Query: 450 EKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMF 271
           +K  ++  EM +   E   V   A++ G++    + EAW VF  M+ KG  P + +YS+F
Sbjct: 465 QKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIKPTWKSYSIF 524

Query: 270 ITCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHM 109
           I  LCKV +++E +++L +M AS +F     F  V   + R+G+ D  R V  M
Sbjct: 525 IKELCKVSRTDEIIKVLGKMQASKMFICDEIFEWVISCMERKGEMDNIRKVKQM 578



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/106 (29%), Positives = 53/106 (50%)
 Frame = -2

Query: 435 MVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMFITCLC 256
           +++EM+   CE  + T++ LIR Y     +G+A  V   M+  G  PD   Y + +  LC
Sbjct: 226 LLEEMEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVEVYEVTLHSLC 285

Query: 255 KVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTV 118
             GK E AL++  EMV   + P+   ++ +   L + G     ++V
Sbjct: 286 DAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSV 331


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/127 (63%), Positives = 100/127 (78%)
 Frame = -2

Query: 453  LEKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSM 274
            +EKA++  +EM     EPT+VTYSALIRGYM VG+  +AW +F+ MKLKG  PDF TYSM
Sbjct: 908  VEKAIETFEEMLHSGYEPTIVTYSALIRGYMNVGRPIDAWDIFYRMKLKGPFPDFKTYSM 967

Query: 273  FITCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHMKSNVT 94
            F+TCLCKVGKSEE ++L+SEM+ SGI PST+NFRTV +GLNREGK DLAR VL  KS + 
Sbjct: 968  FLTCLCKVGKSEEGMRLISEMLDSGIVPSTINFRTVVYGLNREGKHDLARVVLQQKSELR 1027

Query: 93   SRRKFVT 73
             +RK +T
Sbjct: 1028 RKRKLIT 1034



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/83 (30%), Positives = 52/83 (62%)
 Frame = -2

Query: 450 EKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMF 271
           E+A  +  EM  +  +P VV  +A++ G+++   + +AW +F  M+ +G  P + ++++F
Sbjct: 451 EEACMLYDEMLGKGIKPDVVAITAMVAGHVSQNHISDAWKMFKSMECQGIKPTWKSFAVF 510

Query: 270 ITCLCKVGKSEEALQLLSEMVAS 202
           I  LCK  ++++ +++L EM AS
Sbjct: 511 IKELCKASQTDDIVKVLHEMQAS 533


>ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317055|gb|EFH47477.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1029

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/126 (61%), Positives = 99/126 (78%)
 Frame = -2

Query: 450  EKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMF 271
            EK L+   +M++E CEP+VVTY+A+I GYM++GKV EAW  F  ++ KG +PDF TYS F
Sbjct: 904  EKVLETCHKMKEESCEPSVVTYTAMICGYMSLGKVEEAWKAFRNIEEKGTSPDFKTYSKF 963

Query: 270  ITCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQDLARTVLHMKSNVTS 91
            I CLC+ GKSE+AL+LLSEM+  GI PST+NFRTV +GLNREGKQDLAR VLH KS + +
Sbjct: 964  INCLCQAGKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKQDLARIVLHKKSALVA 1023

Query: 90   RRKFVT 73
            +RK  T
Sbjct: 1024 QRKVST 1029



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/106 (31%), Positives = 57/106 (53%)
 Frame = -2

Query: 450 EKALQMVQEMQDEECEPTVVTYSALIRGYMTVGKVGEAWSVFHGMKLKGQAPDFHTYSMF 271
           EK   +  EM +   EP  V  +A++ G++   +V EAW VF  M+ KG  P + +YS+F
Sbjct: 449 EKGCNLFSEMIESGIEPDSVAITAVVAGHLGQNRVAEAWKVFGSMEEKGIKPTWKSYSIF 508

Query: 270 ITCLCKVGKSEEALQLLSEMVASGIFPSTVNFRTVNFGLNREGKQD 133
           +  LC+  + +E + L ++M AS I      F  V   + + G+++
Sbjct: 509 MKELCRSSRYDEIITLFNQMHASKIAIRDDIFSWVISSMEKNGEKE 554