BLASTX nr result

ID: Cnidium21_contig00023874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023874
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [V...    84   9e-14
ref|XP_002329873.1| GRAS family transcription factor [Populus tr...    71   8e-10
ref|XP_002528940.1| conserved hypothetical protein [Ricinus comm...    69   4e-09
ref|XP_002304419.1| GRAS family transcription factor [Populus tr...    65   4e-08
emb|CBI31914.3| unnamed protein product [Vitis vinifera]               63   2e-07

>ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [Vitis vinifera]
          Length = 814

 Score = 84.0 bits (206), Expect = 9e-14
 Identities = 72/204 (35%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
 Frame = -3

Query: 1027 QMRGIGYNLQAMVDNDKGSSFEAKCKKEAILTGI-HEPFFALDTRRXXXXXXXXXXXXXX 851
            +MRGI +N Q       G     K K+E +L+ + +EP   LDTRR              
Sbjct: 2    EMRGIPFNFQ-------GQGVLEKWKEEEVLSFLSNEPTSVLDTRRSPSPPTSTSTSTLA 54

Query: 850  XXXXXXXXXXXG--------HNNSANLL---LISEGTMNHKWQVSLP--ENEQESGG--- 719
                                 +N+  +    L+S+  +  KW VSLP   N  + GG   
Sbjct: 55   SSFAGGGGSTGSVGVGGGGSADNTPGVAAGPLVSDNCLQ-KWPVSLPLETNPPDPGGVCG 113

Query: 718  ---RKDEWASELLPIS---------GAGSPQRFGLGNGIEDWESLFSDSAS----HDQ-- 593
               RKDEWA+EL PI+         GAG  +  GLG G+EDWES+ S+SA+    H+Q  
Sbjct: 114  GGSRKDEWAAELQPITSGLVELVAGGAGEERCGGLGLGLEDWESMLSESAAASPGHEQSL 173

Query: 592  LRWISGDVDETPLSLKQLLQGGNN 521
            L WISGDVD+    LK LLQ G N
Sbjct: 174  LGWISGDVDDPSFGLKHLLQSGGN 197



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
 Frame = -3

Query: 277 SQKDQHQF--EPQPKRHNLGIPNRNTGATKTPFVD----GFLQSMKQPQMGFSNQFNLLP 116
           +Q+DQH     PQ KRHN G  + N+   K PF D      L+  +Q  + F+NQ  LLP
Sbjct: 348 TQQDQHHLLQPPQAKRHNPGGLDPNSQMPKVPFADLGHEFLLRRQQQQPLCFTNQLQLLP 407

Query: 115 PHQLLQKPFISPKQQLTGGVREQISAASH 29
            HQL QKP +  KQ++ GG  E    + H
Sbjct: 408 QHQLQQKPLMLSKQKMVGGGEEMAPQSHH 436


>ref|XP_002329873.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222871110|gb|EEF08241.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 777

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
 Frame = -3

Query: 727 SGGRKDEWASELLPISGA----GSPQRFGLGNGIEDWESLFSDSASHDQ-LRWISGDVDE 563
           S  RKDEWA+EL PI        S  R GLG  +EDWE++ S+ +     LRWI+GDVD+
Sbjct: 98  SNERKDEWATELQPIPSGLEFVSSGARCGLG--LEDWENMLSEPSQEQSFLRWIAGDVDD 155

Query: 562 TPLSLKQLLQGGNN 521
           T   LKQLLQ GNN
Sbjct: 156 TQFGLKQLLQSGNN 169


>ref|XP_002528940.1| conserved hypothetical protein [Ricinus communis]
           gi|223531642|gb|EEF33469.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
 Frame = -3

Query: 718 RKDEWASELLPI-SGAGSPQRFGLGNGIEDWESLFSD-SASHDQLRWISGDVDETPLSLK 545
           RKDEWA+EL PI SG         G G+EDWE++FS+ +     LRWI+GDVDE+   L+
Sbjct: 114 RKDEWATELQPIPSGLEISAGERCGVGLEDWENMFSEPNQEQSLLRWIAGDVDES-FGLR 172

Query: 544 QLLQGGNN 521
           QLLQGGNN
Sbjct: 173 QLLQGGNN 180


>ref|XP_002304419.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841851|gb|EEE79398.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 777

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
 Frame = -3

Query: 718 RKDEWASELLPISGA----GSPQRFGLGNGIEDWESLFSD-SASHDQLRWISGDVDETPL 554
           RKDEWA+EL P         + +R GLG  +EDWE++ S+ S     LRWI+GDVD+T  
Sbjct: 97  RKDEWATELQPFPSGLEFVSTGERCGLG--LEDWENMLSEPSQEQSLLRWIAGDVDDTQF 154

Query: 553 SLKQLLQGGNN 521
            LKQLLQ G++
Sbjct: 155 GLKQLLQSGSS 165


>emb|CBI31914.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
 Frame = -3

Query: 277 SQKDQHQF--EPQPKRHNLGIPNRNTGATKTPFVD----GFLQSMKQPQMGFSNQFNLLP 116
           +Q+DQH     PQ KRHN G  + N+   K PF D      L+  +Q  + F+NQ  LLP
Sbjct: 46  TQQDQHHLLQPPQAKRHNPGGLDPNSQMPKVPFADLGHEFLLRRQQQQPLCFTNQLQLLP 105

Query: 115 PHQLLQKPFISPKQQLTGGVREQISAASH 29
            HQL QKP +  KQ++ GG  E    + H
Sbjct: 106 QHQLQQKPLMLSKQKMVGGGEEMAPQSHH 134


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