BLASTX nr result

ID: Cnidium21_contig00023868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023868
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g...   284   1e-74
ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g...   283   2e-74
ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|2...   281   6e-74
gb|ABK95423.1| unknown [Populus trichocarpa]                          281   6e-74
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...   281   8e-74

>ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 291

 Score =  284 bits (727), Expect = 1e-74
 Identities = 139/153 (90%), Positives = 150/153 (98%)
 Frame = +1

Query: 67  IVKRTIRVDIPVDHYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEIM 246
           IVK+T+RVDIPVD YPNFNFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +EE+M
Sbjct: 139 IVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMM 198

Query: 247 RGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFYKKQQLRELA 426
           RGKPGYEHLNEPLHILVEAELPVEI+DARLMQAREILEDLLKPVDESQDFYKKQQLRELA
Sbjct: 199 RGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESQDFYKKQQLRELA 258

Query: 427 LINGTLRDEGSQMSGSVSPFNSSLGMKRAKTRG 525
           ++NGTLR+EGS MSGSVSPF++SLGMKRAKTRG
Sbjct: 259 MLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 291


>ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 292

 Score =  283 bits (724), Expect = 2e-74
 Identities = 138/153 (90%), Positives = 150/153 (98%)
 Frame = +1

Query: 67  IVKRTIRVDIPVDHYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEIM 246
           IVK+T+RVDIPVD YPNFNFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +EE+M
Sbjct: 140 IVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMM 199

Query: 247 RGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFYKKQQLRELA 426
           RGKPGYEHLNEPLHILVEAELPVEI+DARLMQAR+ILEDLLKPVDESQDFYKKQQLRELA
Sbjct: 200 RGKPGYEHLNEPLHILVEAELPVEIVDARLMQARDILEDLLKPVDESQDFYKKQQLRELA 259

Query: 427 LINGTLRDEGSQMSGSVSPFNSSLGMKRAKTRG 525
           ++NGTLR+EGS MSGSVSPF++SLGMKRAKTRG
Sbjct: 260 MLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 292


>ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|222872135|gb|EEF09266.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  281 bits (720), Expect = 6e-74
 Identities = 138/153 (90%), Positives = 147/153 (96%)
 Frame = +1

Query: 67  IVKRTIRVDIPVDHYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEIM 246
           I KRTIRVDIPVD YPN+NFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP KEE+M
Sbjct: 149 IAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAKEEMM 208

Query: 247 RGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFYKKQQLRELA 426
           RGKPGYEHLNEPLHILVE ELPVEI+DARLMQA EILEDLLKPVDESQD+YKKQQLRELA
Sbjct: 209 RGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEILEDLLKPVDESQDYYKKQQLRELA 268

Query: 427 LINGTLRDEGSQMSGSVSPFNSSLGMKRAKTRG 525
           ++NGTLR+EGS MSGSVSPFN+SLGMKRAKTRG
Sbjct: 269 MLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 301


>gb|ABK95423.1| unknown [Populus trichocarpa]
          Length = 176

 Score =  281 bits (720), Expect = 6e-74
 Identities = 138/153 (90%), Positives = 147/153 (96%)
 Frame = +1

Query: 67  IVKRTIRVDIPVDHYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEIM 246
           I KRTIRVDIPVD YPN+NFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP KEE+M
Sbjct: 24  IAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAKEEMM 83

Query: 247 RGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFYKKQQLRELA 426
           RGKPGYEHLNEPLHILVE ELPVEI+DARLMQA EILEDLLKPVDESQD+YKKQQLRELA
Sbjct: 84  RGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEILEDLLKPVDESQDYYKKQQLRELA 143

Query: 427 LINGTLRDEGSQMSGSVSPFNSSLGMKRAKTRG 525
           ++NGTLR+EGS MSGSVSPFN+SLGMKRAKTRG
Sbjct: 144 MLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 176


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  281 bits (719), Expect = 8e-74
 Identities = 137/153 (89%), Positives = 148/153 (96%)
 Frame = +1

Query: 67  IVKRTIRVDIPVDHYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEIM 246
           IVKRTIRVDIPVD YPN+NFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +E++M
Sbjct: 150 IVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREDMM 209

Query: 247 RGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFYKKQQLRELA 426
           RGKPGYEHLNEPLHILVE ELPVEI+DARLMQAREILEDLL+PVDESQD+YKKQQLRELA
Sbjct: 210 RGKPGYEHLNEPLHILVEGELPVEIVDARLMQAREILEDLLRPVDESQDYYKKQQLRELA 269

Query: 427 LINGTLRDEGSQMSGSVSPFNSSLGMKRAKTRG 525
           L+NGT R+EGS MSGSVSPFN+SLGMKRAKTRG
Sbjct: 270 LLNGTFREEGSPMSGSVSPFNNSLGMKRAKTRG 302


Top