BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023860
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   292   3e-77
ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncat...   290   2e-76
ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   290   2e-76
ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like...   288   5e-76
ref|XP_002451534.1| hypothetical protein SORBIDRAFT_04g003370 [S...   286   1e-75

>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
           gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
           factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  292 bits (748), Expect = 3e-77
 Identities = 150/172 (87%), Positives = 150/172 (87%)
 Frame = -3

Query: 518 PIGGGLTPLLATPTPMGTPLYAIPEENRGQQFDVPKELPGGLPFMKPEDYLYFGALLNXX 339
           PI      LLATPTPMGTPLYAIPEENRGQQFDVPKE PGGLPFMKPEDY YFGALLN  
Sbjct: 380 PIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEE 439

Query: 338 XXXXXXXXXXXERKIMKLLLKVKNGTPPQHKTALRQLTDKAREFGAGPLFNRILPLLMQP 159
                      ERKIMKLLLKVKNGTPPQ KTALRQLTDKAREFGAGPLFNRILPLLMQP
Sbjct: 440 DEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQP 499

Query: 158 TLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGR 3
           TLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGR
Sbjct: 500 TLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGR 551



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 15/59 (25%)
 Frame = -3

Query: 605 VGDATPSLSRKNRWDETPTPGRVADSDATPIGG---GLTPL------------LATPTP 474
           VGDATP + R+NRWDETPTPGR+AD DATP GG   G TP             +ATPTP
Sbjct: 221 VGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTP 279


>ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355482272|gb|AES63475.1| Splicing factor 3B subunit
           [Medicago truncatula]
          Length = 1378

 Score =  290 bits (741), Expect = 2e-76
 Identities = 151/182 (82%), Positives = 154/182 (84%), Gaps = 2/182 (1%)
 Frame = -3

Query: 542 RVADSDAT--PIGGGLTPLLATPTPMGTPLYAIPEENRGQQFDVPKELPGGLPFMKPEDY 369
           +V D  A+  PI      LLATPTP+GTPLY IPEENRGQQFDVPKE PGGLPFMKPEDY
Sbjct: 372 KVLDPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEAPGGLPFMKPEDY 431

Query: 368 LYFGALLNXXXXXXXXXXXXXERKIMKLLLKVKNGTPPQHKTALRQLTDKAREFGAGPLF 189
            YFGALLN             ERKIMKLLLKVKNGTPPQ KTALRQLTDKAREFGAGPLF
Sbjct: 432 QYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLF 491

Query: 188 NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVE 9
           NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVE
Sbjct: 492 NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVE 551

Query: 8   GR 3
           GR
Sbjct: 552 GR 553



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
 Frame = -3

Query: 605 VGDATPSLSRKNRWDETPTPGRVADSDATPIG---GGLTPLLAT--PTP-MGTPLYAIPE 444
           V DATP   R+NRWDETPTPGR+ DSDATP G   GG+TP  AT   TP +   +   P+
Sbjct: 227 VVDATPG--RRNRWDETPTPGRLVDSDATPGGVTPGGVTPGGATWDATPKLSGGITPTPK 284

Query: 443 ENRGQQFDVP------KELPGGLP 390
             R +  + P        LPG  P
Sbjct: 285 RQRSRWDETPATMGSVTPLPGATP 308


>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  290 bits (741), Expect = 2e-76
 Identities = 148/172 (86%), Positives = 150/172 (87%)
 Frame = -3

Query: 518 PIGGGLTPLLATPTPMGTPLYAIPEENRGQQFDVPKELPGGLPFMKPEDYLYFGALLNXX 339
           PI      LLATPTP+GTPLYAIPEENRGQQFDVPKE PGGLPFMKPEDY YFGALLN  
Sbjct: 389 PIRTPARKLLATPTPLGTPLYAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNDE 448

Query: 338 XXXXXXXXXXXERKIMKLLLKVKNGTPPQHKTALRQLTDKAREFGAGPLFNRILPLLMQP 159
                      ERKIMKLLLKVKNGTPPQ KTALRQLTDKAREFGAGPLFNRILPLLMQP
Sbjct: 449 DEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQP 508

Query: 158 TLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGR 3
           TLEDQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPLLIDEDYYARVEGR
Sbjct: 509 TLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGR 560



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 8/80 (10%)
 Frame = -3

Query: 605 VGDATPSLSRKNRWDETPTPGRVADSDATPIGGGLTPLLATPTPM---GTPLYA-----I 450
           V DATPS+SR+NRWDETPTPGR+AD+DATP  GG TP  ATP  M    TP  A      
Sbjct: 229 VADATPSISRRNRWDETPTPGRLADADATPAAGGATP-GATPAGMTWDATPKLAGLATPT 287

Query: 449 PEENRGQQFDVPKELPGGLP 390
           P+  R +  + P  +    P
Sbjct: 288 PKRQRSRWDETPATMGSATP 307


>ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max]
          Length = 1172

 Score =  288 bits (737), Expect = 5e-76
 Identities = 150/182 (82%), Positives = 154/182 (84%), Gaps = 2/182 (1%)
 Frame = -3

Query: 542 RVADSDAT--PIGGGLTPLLATPTPMGTPLYAIPEENRGQQFDVPKELPGGLPFMKPEDY 369
           +V D  A+  PI      LLATPTP+GTPLY IPEENRGQQFDVPKE PGGLPFMKPEDY
Sbjct: 280 KVLDPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEAPGGLPFMKPEDY 339

Query: 368 LYFGALLNXXXXXXXXXXXXXERKIMKLLLKVKNGTPPQHKTALRQLTDKAREFGAGPLF 189
            YFGALLN             ERKIMKLLLKVKNGTPPQ KTALRQLTDKAREFGAGPLF
Sbjct: 340 QYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLF 399

Query: 188 NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVE 9
           NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPLLIDEDYYARVE
Sbjct: 400 NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVE 459

Query: 8   GR 3
           GR
Sbjct: 460 GR 461



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/59 (59%), Positives = 37/59 (62%), Gaps = 15/59 (25%)
 Frame = -3

Query: 605 VGDATPSLSRKNRWDETPTPGRVADSDATPIGG---GLTPL------------LATPTP 474
           V DATP   R+NRWDETPTPGRVADSDATP GG   G TP             +ATPTP
Sbjct: 135 VTDATPG--RRNRWDETPTPGRVADSDATPAGGATPGATPAGMTWDATPKLSGMATPTP 191


>ref|XP_002451534.1| hypothetical protein SORBIDRAFT_04g003370 [Sorghum bicolor]
           gi|241931365|gb|EES04510.1| hypothetical protein
           SORBIDRAFT_04g003370 [Sorghum bicolor]
          Length = 1280

 Score =  286 bits (733), Expect = 1e-75
 Identities = 146/172 (84%), Positives = 149/172 (86%)
 Frame = -3

Query: 518 PIGGGLTPLLATPTPMGTPLYAIPEENRGQQFDVPKELPGGLPFMKPEDYLYFGALLNXX 339
           PI      LLATPTP+GTPLYAIPEENRGQQFDVPKELPGGLP MKPEDY YFG LLN  
Sbjct: 398 PIRTPARKLLATPTPLGTPLYAIPEENRGQQFDVPKELPGGLPLMKPEDYQYFGTLLNEE 457

Query: 338 XXXXXXXXXXXERKIMKLLLKVKNGTPPQHKTALRQLTDKAREFGAGPLFNRILPLLMQP 159
                      ERKIMKLLLKVKNGTPPQ KTALRQLTDKAREFGAGPLFN+ILPLLMQP
Sbjct: 458 EEEQLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQP 517

Query: 158 TLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGR 3
           TLEDQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPLLIDEDYYARVEGR
Sbjct: 518 TLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGR 569



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
 Frame = -3

Query: 605 VGDATPSLSRKNRWDETPTPGRVADSDATPIGGGLTPLL-------ATPTPMGTPLYAIP 447
           VGDATPS+ R+NRWDETPTPGR+AD+DATP  GG TP         ATP   G       
Sbjct: 239 VGDATPSV-RRNRWDETPTPGRMADADATPAAGGATPGATPSGAWDATPKLPGGVTPTPG 297

Query: 446 EENRGQQFDVPKEL----PGGLPFMKPEDY 369
           ++ R +  + P  +    PGGL    P  Y
Sbjct: 298 KKQRSRWDETPASMGSATPGGLGAATPAGY 327