BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023859
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   475   e-132
ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   473   e-131
ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like...   456   e-126
ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncat...   446   e-123
ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|2...   445   e-123

>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  475 bits (1223), Expect = e-132
 Identities = 247/348 (70%), Positives = 259/348 (74%), Gaps = 2/348 (0%)
 Frame = -3

Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861
            V DATPS+SR+NRWDETPTPGR+AD+D               GMTWDATPKL G+ATPTP
Sbjct: 229  VADATPSISRRNRWDETPTPGRLADADATPAAGGATPGATPAGMTWDATPKLAGLATPTP 288

Query: 860  KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687
            KRQRSRWDE                          VGGVELATPTP AIN+RGAITPEQY
Sbjct: 289  KRQRSRWDETPATMGSATPMAGATPAAAYTPGVTPVGGVELATPTPSAINLRGAITPEQY 348

Query: 686  NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507
            N LRWEKDIE+RNRPLTDEELD+MFPQEGY ILDPP SYVPIRTPARKLLATPTP+GTPL
Sbjct: 349  NLLRWEKDIEERNRPLTDEELDAMFPQEGYKILDPPPSYVPIRTPARKLLATPTPLGTPL 408

Query: 506  YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327
            Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLN+EDEE LSP+EQKERKIMKLLL
Sbjct: 409  YAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNDEDEEELSPEEQKERKIMKLLL 468

Query: 326  KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147
            KVKNGTPPQRKTALRQLTDKAREFGA                                  
Sbjct: 469  KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 506

Query: 146  XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3
                 DQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPLLIDEDYY
Sbjct: 507  QPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYY 554


>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
            gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
            factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  473 bits (1217), Expect = e-131
 Identities = 247/348 (70%), Positives = 257/348 (73%), Gaps = 2/348 (0%)
 Frame = -3

Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861
            VGDATP + R+NRWDETPTPGR+AD D                MTWDATPKL GMATPTP
Sbjct: 221  VGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAG-MTWDATPKLAGMATPTP 279

Query: 860  KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687
            KRQRSRWDE                          VGGVELATPTPGAIN+RG +TPEQY
Sbjct: 280  KRQRSRWDETPATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQY 339

Query: 686  NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507
            N +RWE+DIE+RNRPLTDEELD+MFPQEGY ILDPPASYVPIRTPARKLLATPTPMGTPL
Sbjct: 340  NLMRWERDIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL 399

Query: 506  YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327
            Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLNEEDEE LSP+EQKERKIMKLLL
Sbjct: 400  YAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLL 459

Query: 326  KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147
            KVKNGTPPQRKTALRQLTDKAREFGA                                  
Sbjct: 460  KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 497

Query: 146  XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3
                 DQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY
Sbjct: 498  QPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 545


>ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max]
          Length = 1172

 Score =  456 bits (1172), Expect = e-126
 Identities = 243/348 (69%), Positives = 255/348 (73%), Gaps = 2/348 (0%)
 Frame = -3

Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861
            V DATP   R+NRWDETPTPGRVADSD                MTWDATPKL GMATPTP
Sbjct: 135  VTDATPG--RRNRWDETPTPGRVADSDATPAGGATPGATPAG-MTWDATPKLSGMATPTP 191

Query: 860  KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687
            KRQRSRWDE                          VGG+ELATPTPGA+  +G+ITPEQY
Sbjct: 192  KRQRSRWDETPATMGSATPLPGATPAAAYTPGVTPVGGIELATPTPGAL--QGSITPEQY 249

Query: 686  NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507
            N LRWE+DIE+RNRPLTDEELD+MFPQEGY +LDPPASYVPIRTPARKLLATPTP+GTPL
Sbjct: 250  NLLRWERDIEERNRPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPL 309

Query: 506  YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327
            Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLNEE+EE LSPDEQKERKIMKLLL
Sbjct: 310  YQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLL 369

Query: 326  KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147
            KVKNGTPPQRKTALRQLTDKAREFGA                                  
Sbjct: 370  KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 407

Query: 146  XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3
                 DQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPLLIDEDYY
Sbjct: 408  QPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYY 455


>ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncatula]
            gi|355482272|gb|AES63475.1| Splicing factor 3B subunit
            [Medicago truncatula]
          Length = 1378

 Score =  446 bits (1146), Expect = e-123
 Identities = 239/348 (68%), Positives = 250/348 (71%), Gaps = 2/348 (0%)
 Frame = -3

Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861
            V DATP   R+NRWDETPTPGR+ DSD                 TWDATPKL G  TPTP
Sbjct: 227  VVDATPG--RRNRWDETPTPGRLVDSDATPGGVTPGGVTPGGA-TWDATPKLSGGITPTP 283

Query: 860  KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687
            KRQRSRWDE                          VGGVELATPTPGA+  +G+ TPEQY
Sbjct: 284  KRQRSRWDETPATMGSVTPLPGATPAAAYTPGVTPVGGVELATPTPGAL--QGSFTPEQY 341

Query: 686  NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507
            N LRWE+DIE+RNRPLTDEELD+MFPQEGY +LDPPASYVPIRTPARKLLATPTP+GTPL
Sbjct: 342  NLLRWERDIEERNRPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPL 401

Query: 506  YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327
            Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLNEE+EE LSPDEQKERKIMKLLL
Sbjct: 402  YQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLL 461

Query: 326  KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147
            KVKNGTPPQRKTALRQLTDKAREFGA                                  
Sbjct: 462  KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 499

Query: 146  XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3
                 DQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY
Sbjct: 500  QPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 547


>ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|222866972|gb|EEF04103.1|
            predicted protein [Populus trichocarpa]
          Length = 1267

 Score =  445 bits (1145), Expect = e-123
 Identities = 237/350 (67%), Positives = 253/350 (72%), Gaps = 4/350 (1%)
 Frame = -3

Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861
            +GDATP   RKNRWDETPTPGRVADSD               G+TWD+TPK  GM TPTP
Sbjct: 226  IGDATPGAGRKNRWDETPTPGRVADSD-ATPAGGVTPGATPAGVTWDSTPK--GMVTPTP 282

Query: 860  KRQRSRWDE----XXXXXXXXXXXXXXXXXXXXXXXPVGGVELATPTPGAINMRGAITPE 693
            KRQ+SRWDE                           P+G +++ATPTP A+ MRGAITPE
Sbjct: 283  KRQKSRWDETPASMESATPALGGVTPSLGGATPGPTPLGAIDMATPTPNALAMRGAITPE 342

Query: 692  QYNFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGT 513
            QYN LRWEKDIE+RNRPLTDEELD+MFPQEGY IL+PPASYVPIRTPARKLLATPTPMGT
Sbjct: 343  QYNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGT 402

Query: 512  PLYVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKL 333
            PLY IP+ENRGQQFD+ +E P GLPFMKPEDYQYFGALLNEEDEE LSP+EQKERKIMKL
Sbjct: 403  PLYSIPDENRGQQFDLGQEPPAGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKL 462

Query: 332  LLKVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 153
            LLKVKNGTPPQRKTALRQLTDKAREFGA                                
Sbjct: 463  LLKVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPL 500

Query: 152  XXXXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3
                   DQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY
Sbjct: 501  LMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 550