BLASTX nr result
ID: Cnidium21_contig00023859
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00023859 (1042 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like... 475 e-132 ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like... 473 e-131 ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like... 456 e-126 ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncat... 446 e-123 ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|2... 445 e-123 >ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera] Length = 1271 Score = 475 bits (1223), Expect = e-132 Identities = 247/348 (70%), Positives = 259/348 (74%), Gaps = 2/348 (0%) Frame = -3 Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861 V DATPS+SR+NRWDETPTPGR+AD+D GMTWDATPKL G+ATPTP Sbjct: 229 VADATPSISRRNRWDETPTPGRLADADATPAAGGATPGATPAGMTWDATPKLAGLATPTP 288 Query: 860 KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687 KRQRSRWDE VGGVELATPTP AIN+RGAITPEQY Sbjct: 289 KRQRSRWDETPATMGSATPMAGATPAAAYTPGVTPVGGVELATPTPSAINLRGAITPEQY 348 Query: 686 NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507 N LRWEKDIE+RNRPLTDEELD+MFPQEGY ILDPP SYVPIRTPARKLLATPTP+GTPL Sbjct: 349 NLLRWEKDIEERNRPLTDEELDAMFPQEGYKILDPPPSYVPIRTPARKLLATPTPLGTPL 408 Query: 506 YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327 Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLN+EDEE LSP+EQKERKIMKLLL Sbjct: 409 YAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNDEDEEELSPEEQKERKIMKLLL 468 Query: 326 KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147 KVKNGTPPQRKTALRQLTDKAREFGA Sbjct: 469 KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 506 Query: 146 XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3 DQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPLLIDEDYY Sbjct: 507 QPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYY 554 >ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus] gi|449523197|ref|XP_004168610.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus] Length = 1262 Score = 473 bits (1217), Expect = e-131 Identities = 247/348 (70%), Positives = 257/348 (73%), Gaps = 2/348 (0%) Frame = -3 Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861 VGDATP + R+NRWDETPTPGR+AD D MTWDATPKL GMATPTP Sbjct: 221 VGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAG-MTWDATPKLAGMATPTP 279 Query: 860 KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687 KRQRSRWDE VGGVELATPTPGAIN+RG +TPEQY Sbjct: 280 KRQRSRWDETPATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQY 339 Query: 686 NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507 N +RWE+DIE+RNRPLTDEELD+MFPQEGY ILDPPASYVPIRTPARKLLATPTPMGTPL Sbjct: 340 NLMRWERDIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL 399 Query: 506 YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327 Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLNEEDEE LSP+EQKERKIMKLLL Sbjct: 400 YAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLL 459 Query: 326 KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147 KVKNGTPPQRKTALRQLTDKAREFGA Sbjct: 460 KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 497 Query: 146 XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3 DQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY Sbjct: 498 QPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 545 >ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max] Length = 1172 Score = 456 bits (1172), Expect = e-126 Identities = 243/348 (69%), Positives = 255/348 (73%), Gaps = 2/348 (0%) Frame = -3 Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861 V DATP R+NRWDETPTPGRVADSD MTWDATPKL GMATPTP Sbjct: 135 VTDATPG--RRNRWDETPTPGRVADSDATPAGGATPGATPAG-MTWDATPKLSGMATPTP 191 Query: 860 KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687 KRQRSRWDE VGG+ELATPTPGA+ +G+ITPEQY Sbjct: 192 KRQRSRWDETPATMGSATPLPGATPAAAYTPGVTPVGGIELATPTPGAL--QGSITPEQY 249 Query: 686 NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507 N LRWE+DIE+RNRPLTDEELD+MFPQEGY +LDPPASYVPIRTPARKLLATPTP+GTPL Sbjct: 250 NLLRWERDIEERNRPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPL 309 Query: 506 YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327 Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLNEE+EE LSPDEQKERKIMKLLL Sbjct: 310 YQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLL 369 Query: 326 KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147 KVKNGTPPQRKTALRQLTDKAREFGA Sbjct: 370 KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 407 Query: 146 XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3 DQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPLLIDEDYY Sbjct: 408 QPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYY 455 >ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncatula] gi|355482272|gb|AES63475.1| Splicing factor 3B subunit [Medicago truncatula] Length = 1378 Score = 446 bits (1146), Expect = e-123 Identities = 239/348 (68%), Positives = 250/348 (71%), Gaps = 2/348 (0%) Frame = -3 Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861 V DATP R+NRWDETPTPGR+ DSD TWDATPKL G TPTP Sbjct: 227 VVDATPG--RRNRWDETPTPGRLVDSDATPGGVTPGGVTPGGA-TWDATPKLSGGITPTP 283 Query: 860 KRQRSRWDEXXXXXXXXXXXXXXXXXXXXXXXP--VGGVELATPTPGAINMRGAITPEQY 687 KRQRSRWDE VGGVELATPTPGA+ +G+ TPEQY Sbjct: 284 KRQRSRWDETPATMGSVTPLPGATPAAAYTPGVTPVGGVELATPTPGAL--QGSFTPEQY 341 Query: 686 NFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGTPL 507 N LRWE+DIE+RNRPLTDEELD+MFPQEGY +LDPPASYVPIRTPARKLLATPTP+GTPL Sbjct: 342 NLLRWERDIEERNRPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPL 401 Query: 506 YVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKLLL 327 Y IPEENRGQQFDVPKE PGGLPFMKPEDYQYFGALLNEE+EE LSPDEQKERKIMKLLL Sbjct: 402 YQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLL 461 Query: 326 KVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147 KVKNGTPPQRKTALRQLTDKAREFGA Sbjct: 462 KVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPLLM 499 Query: 146 XXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3 DQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY Sbjct: 500 QPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 547 >ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|222866972|gb|EEF04103.1| predicted protein [Populus trichocarpa] Length = 1267 Score = 445 bits (1145), Expect = e-123 Identities = 237/350 (67%), Positives = 253/350 (72%), Gaps = 4/350 (1%) Frame = -3 Query: 1040 VGDATPSLSRKNRWDETPTPGRVADSDXXXXXXXXXXXXXXXGMTWDATPKLGGMATPTP 861 +GDATP RKNRWDETPTPGRVADSD G+TWD+TPK GM TPTP Sbjct: 226 IGDATPGAGRKNRWDETPTPGRVADSD-ATPAGGVTPGATPAGVTWDSTPK--GMVTPTP 282 Query: 860 KRQRSRWDE----XXXXXXXXXXXXXXXXXXXXXXXPVGGVELATPTPGAINMRGAITPE 693 KRQ+SRWDE P+G +++ATPTP A+ MRGAITPE Sbjct: 283 KRQKSRWDETPASMESATPALGGVTPSLGGATPGPTPLGAIDMATPTPNALAMRGAITPE 342 Query: 692 QYNFLRWEKDIEDRNRPLTDEELDSMFPQEGYVILDPPASYVPIRTPARKLLATPTPMGT 513 QYN LRWEKDIE+RNRPLTDEELD+MFPQEGY IL+PPASYVPIRTPARKLLATPTPMGT Sbjct: 343 QYNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGT 402 Query: 512 PLYVIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEDEEGLSPDEQKERKIMKL 333 PLY IP+ENRGQQFD+ +E P GLPFMKPEDYQYFGALLNEEDEE LSP+EQKERKIMKL Sbjct: 403 PLYSIPDENRGQQFDLGQEPPAGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKL 462 Query: 332 LLKVKNGTPPQRKTALRQLTDKAREFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 153 LLKVKNGTPPQRKTALRQLTDKAREFGA Sbjct: 463 LLKVKNGTPPQRKTALRQLTDKAREFGA----------------------GPLFNRILPL 500 Query: 152 XXXXXXXDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 3 DQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY Sbjct: 501 LMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY 550