BLASTX nr result

ID: Cnidium21_contig00023839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023839
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ01809.1| hypothetical protein OsI_23834 [Oryza sativa Indi...    68   1e-09
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|ABD78322.1| polyprotein [Primula vulgaris]                          59   4e-07
gb|ABA97402.1| retrotransposon protein, putative, unclassified [...    59   5e-07
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    59   5e-07

>gb|EAZ01809.1| hypothetical protein OsI_23834 [Oryza sativa Indica Group]
           gi|125597977|gb|EAZ37757.1| hypothetical protein
           OsJ_22094 [Oryza sativa Japonica Group]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/123 (31%), Positives = 62/123 (50%)
 Frame = +1

Query: 4   ARRWFQVYIIGRETHSWHEFHRAFSARFGSWKQEKLFDNFKHLQQKTTVGSYFVQFEECR 183
           A +W   Y I  ET +W EF      RF +  + ++ D F++L+Q ++V +Y  +FEE  
Sbjct: 160 ADQWIDSYDIPTETLTWPEFCTMVCKRFAAKSKVEITDTFRNLKQYSSVETYIDKFEEIM 219

Query: 184 EQMKERMPFLTEEYFVESFIGGLQDKVXXXXXXXXXXXXEQAYRLAKQCEEPMVVKKVNR 363
             +K   P L EEYF++ FI GL++ +             QAY  A+  +      + NR
Sbjct: 220 PLVKRNNPNLNEEYFLDYFISGLKEHIKRPLKSMGIHSLVQAYEHARNYDSG---PQTNR 276

Query: 364 GGA 372
           GG+
Sbjct: 277 GGS 279


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = +1

Query: 4   ARRWFQVYIIGRETH-SWHEFHRAFSARFGSWKQEKLFDNFKHLQQKTTVGSYFVQFEEC 180
           A  WF+ Y+ G +    W EF +A  +RFGS  ++ + + F  L Q+  +  Y  +FEE 
Sbjct: 149 AEIWFEGYMCGLDVSLEWEEFSKAICSRFGS--RDDIVEEFNKLTQEGGMEEYVERFEEL 206

Query: 181 REQMKERMPFLTEEYFVESFIGGLQDKVXXXXXXXXXXXXEQAYRLAKQCEE 336
           +  M    P L E Y++ SFI GL++ +              A+  AK  EE
Sbjct: 207 KSLMHSLNPLLPESYYISSFISGLKEDIKPMLKILKPGTLMTAFDQAKWQEE 258


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 45/173 (26%), Positives = 75/173 (43%)
 Frame = +1

Query: 13  WFQVYIIGRETHSWHEFHRAFSARFGSWKQEKLFDNFKHLQQKTTVGSYFVQFEECREQM 192
           W+Q         SW       + RFG    E   D    L+Q+ +V  Y   FE    ++
Sbjct: 68  WYQNLEKSDLISSWDNLCDQMTKRFGENLNENPLDQLIKLKQRNSVKEYKSDFEIISNRV 127

Query: 193 KERMPFLTEEYFVESFIGGLQDKVXXXXXXXXXXXXEQAYRLAKQCEEPMVVKKVNRGGA 372
           K+    L+EE+ +  FI GL++++            E A+ +AK  EE + ++K      
Sbjct: 128 KD----LSEEHKLTYFICGLKEEIGLTVKMLFPKSIETAFSIAKYQEEKLHLEKKPNFRT 183

Query: 373 YASKYINHSKEGRLVNMETHTEPITSAPDVIRLFPAQLGDRLKEGMCSYCENK 531
           + S+  N+       N   +T  IT  P + RL   +L DR ++ +C  C+ K
Sbjct: 184 FQSQAPNNQATFSKTN---NTTAITKLPPIKRLTQDELTDRRQKNLCYNCDEK 233


>gb|ABA97402.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 692

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 28/87 (32%), Positives = 49/87 (56%)
 Frame = +1

Query: 4   ARRWFQVYIIGRETHSWHEFHRAFSARFGSWKQEKLFDNFKHLQQKTTVGSYFVQFEECR 183
           A +W +   I   + SW EF      RF +  + ++ + F++L+Q  +V SY  +FE+  
Sbjct: 233 ADQWIESLAIATASLSWPEFKTMLCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEDTM 292

Query: 184 EQMKERMPFLTEEYFVESFIGGLQDKV 264
             +K   P LT++YF++ FI GL+D +
Sbjct: 293 TLVKRSNPTLTKDYFLDYFISGLKDNI 319


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
 Frame = +1

Query: 13  WFQVYIIGRETHSWHEFHRAFSARFGSWKQEKLFDNFKHLQQKTTVGSYFVQFEECREQM 192
           WFQ         SW  F RA   RFGS   E   +    L+Q +TV  Y  QFE    Q+
Sbjct: 102 WFQDIEAAGGISSWEGFVRALQTRFGSSPYENPMEALIRLKQTSTVEDYKSQFEALSNQL 161

Query: 193 KERMPFLTEEYFVESFIGGLQDKVXXXXXXXXXXXXEQAYRLAKQCEEPM-VVKKVNRGG 369
           +     L E Y +  F+ GL++ +              A+ LAK  EE +  +++  + G
Sbjct: 162 RG----LAESYKLSCFLSGLREDIRFMVCMLNPSNLHIAFGLAKMQEENVAALRRTAKLG 217

Query: 370 AYASKYINHSKEGRLVNMETHTEPITSAPDVIRLFPAQLGDRLKEGMCSYCENK 531
           +  ++          +   +  E     P V RL P+Q+ +R  +G+C  C++K
Sbjct: 218 SVPTRL--------AIGPPSPPEKRVIVP-VQRLSPSQMKERRDKGLCYNCDDK 262