BLASTX nr result

ID: Cnidium21_contig00023793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023793
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518375.1| ring finger protein, putative [Ricinus commu...   173   2e-41
ref|XP_002317370.1| predicted protein [Populus trichocarpa] gi|2...   171   9e-41
ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|2...   164   8e-39
ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264...   138   6e-31
emb|CAN79595.1| hypothetical protein VITISV_007038 [Vitis vinifera]   138   6e-31

>ref|XP_002518375.1| ring finger protein, putative [Ricinus communis]
           gi|223542470|gb|EEF44011.1| ring finger protein,
           putative [Ricinus communis]
          Length = 549

 Score =  173 bits (438), Expect = 2e-41
 Identities = 91/180 (50%), Positives = 123/180 (68%), Gaps = 1/180 (0%)
 Frame = +1

Query: 4   NFNGGCMEAANMGVHA-NQVTANRASATFLPPPPILPGHFNLHHPSPPLLPVQGARGRSL 180
           N NGG +E  ++     +++++NR++ TFL P P    H N HHP PP   +QG RG +L
Sbjct: 281 NVNGGSVETGSIVPQRYHELSSNRSNTTFLHPSPPNIRHHNFHHPLPP---IQGMRGHNL 337

Query: 181 ELRPQVAISSRRPSTSGTSQASMNAVQDSGDMSSRFVGIVQPAGLRIYRPHRRELVLDAS 360
            + PQV+ +S R  TS  SQ+++N  QD  D+  R  G VQP GLRIYRPHR  ++ + +
Sbjct: 338 NVPPQVSAASFRGLTSYASQSNVNPSQDGLDIGVRHPGSVQPTGLRIYRPHRDGVIPETT 397

Query: 361 ARQRNLHHLRVLPEDGVALLELSDYHGMVDSVDHHREMRLDIDNMSYEELLALGEQIGSV 540
            R RNL HLRVLP D +A+LE  DY+ + + VDHH +MRLDI++MSYEELLALGE+IGSV
Sbjct: 398 LRHRNLPHLRVLPTDRIAVLEFPDYYEVENYVDHHSDMRLDIEDMSYEELLALGERIGSV 457


>ref|XP_002317370.1| predicted protein [Populus trichocarpa] gi|222860435|gb|EEE97982.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  171 bits (432), Expect = 9e-41
 Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 1/180 (0%)
 Frame = +1

Query: 4   NFNGGCMEAANMGVHA-NQVTANRASATFLPPPPILPGHFNLHHPSPPLLPVQGARGRSL 180
           N NGG +E  NMG+   ++  +NR++A+F  P  +   H N HH SPP   +QG RG ++
Sbjct: 250 NLNGGPIEIGNMGLQRYHEPASNRSNASFSRPSAVNLQHHNFHHMSPP---IQGMRGHNI 306

Query: 181 ELRPQVAISSRRPSTSGTSQASMNAVQDSGDMSSRFVGIVQPAGLRIYRPHRRELVLDAS 360
            + PQ   +S R  T+  SQ +MN  QD  D+  R +G VQP GLR+YR HR  +V + +
Sbjct: 307 NILPQAPAASFRVPTANASQITMNPSQDGLDIGLRHLGSVQPTGLRMYRSHREGVVPETT 366

Query: 361 ARQRNLHHLRVLPEDGVALLELSDYHGMVDSVDHHREMRLDIDNMSYEELLALGEQIGSV 540
            R RNL  LRVLP DGVA+L   DY+ + + VDHHR+MRLDI++MSYEELLALGE+IG+V
Sbjct: 367 LRHRNLPQLRVLPTDGVAILGFPDYYEVENHVDHHRDMRLDIEDMSYEELLALGERIGNV 426


>ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|222846156|gb|EEE83703.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  164 bits (415), Expect = 8e-39
 Identities = 86/180 (47%), Positives = 117/180 (65%), Gaps = 1/180 (0%)
 Frame = +1

Query: 4   NFNGGCMEAANMGVHA-NQVTANRASATFLPPPPILPGHFNLHHPSPPLLPVQGARGRSL 180
           N NG  +E  +MG    ++  +NR++A+F  P P+ P H N HH SPP   +QG RG ++
Sbjct: 268 NVNGVPIETGSMGPQRYHEPASNRSNASFSHPSPVNPQHHNFHHLSPP---IQGIRGHNI 324

Query: 181 ELRPQVAISSRRPSTSGTSQASMNAVQDSGDMSSRFVGIVQPAGLRIYRPHRRELVLDAS 360
            + PQ   +S R  T+  SQ++MN  QD  D+  R  G VQP GLR+YRP    +  + +
Sbjct: 325 NILPQAPAASFRVPTANASQSTMNLSQDGLDIGLRNPGSVQPTGLRMYRPRHEGVAPETT 384

Query: 361 ARQRNLHHLRVLPEDGVALLELSDYHGMVDSVDHHREMRLDIDNMSYEELLALGEQIGSV 540
            R RNL  LRVLP DGVA+L   DY+ + +  DHHR+MRLDI++MSYEELLALGE+IG+V
Sbjct: 385 LRHRNLPRLRVLPTDGVAILGFPDYYEVENYADHHRDMRLDIEDMSYEELLALGERIGNV 444


>ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264059 [Vitis vinifera]
          Length = 543

 Score =  138 bits (347), Expect = 6e-31
 Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 1/180 (0%)
 Frame = +1

Query: 4   NFNGGCMEAANMGVHANQVTANRASATFLPPPPILPGHFNLHHPSPPLLPVQGARGRSLE 183
           N +GG  EA N+G+     T++  S+T    PP+L     LH+P PP  P+QGAR     
Sbjct: 283 NISGGSREAGNVGIQGYHDTSSGRSSTNYLQPPVLHRPHTLHYPPPPPPPMQGARSH--- 339

Query: 184 LRPQVAISSRR-PSTSGTSQASMNAVQDSGDMSSRFVGIVQPAGLRIYRPHRRELVLDAS 360
             PQV  SS R P+ S           ++G    R  G V P G+RIYR +R  +  +A+
Sbjct: 340 FHPQVVASSYRLPTISSRGPVPPQVGVEAGP---RHPGPVPPTGIRIYRSNRGGVAPEAT 396

Query: 361 ARQRNLHHLRVLPEDGVALLELSDYHGMVDSVDHHREMRLDIDNMSYEELLALGEQIGSV 540
           +R  NL +LR+LP + VA+L+LS ++ + D +DHHR+MRLDI++MSYEELLALGE+IG V
Sbjct: 397 SRHHNLPYLRMLPAEEVAILDLSAFYEVGDLIDHHRDMRLDIEDMSYEELLALGERIGHV 456


>emb|CAN79595.1| hypothetical protein VITISV_007038 [Vitis vinifera]
          Length = 656

 Score =  138 bits (347), Expect = 6e-31
 Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 1/180 (0%)
 Frame = +1

Query: 4   NFNGGCMEAANMGVHANQVTANRASATFLPPPPILPGHFNLHHPSPPLLPVQGARGRSLE 183
           N +GG  EA N+G+     T++  S+T    PP+L     LH+P PP  P+QGAR     
Sbjct: 283 NISGGSREAGNVGIQGYHDTSSGRSSTNYLQPPVLHRPHTLHYPPPPPPPMQGARSH--- 339

Query: 184 LRPQVAISSRR-PSTSGTSQASMNAVQDSGDMSSRFVGIVQPAGLRIYRPHRRELVLDAS 360
             PQV  SS R P+ S           ++G    R  G V P G+RIYR +R  +  +A+
Sbjct: 340 FHPQVVASSYRLPTISSRGPVPPQVGVEAGP---RHPGPVPPTGIRIYRSNRGGVAPEAT 396

Query: 361 ARQRNLHHLRVLPEDGVALLELSDYHGMVDSVDHHREMRLDIDNMSYEELLALGEQIGSV 540
           +R  NL +LR+LP + VA+L+LS ++ + D +DHHR+MRLDI++MSYEELLALGE+IG V
Sbjct: 397 SRHHNLPYLRMLPAEEVAILDLSAFYEVGDLIDHHRDMRLDIEDMSYEELLALGERIGHV 456


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