BLASTX nr result

ID: Cnidium21_contig00023791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023791
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol...   127   2e-27
ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu...   126   3e-27
ref|NP_568011.1| RNA recognition motif-containing protein [Arabi...   124   1e-26
ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Gl...   124   2e-26
ref|XP_002866967.1| RNA recognition motif-containing protein [Ar...   123   2e-26

>ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
           sativus] gi|449502733|ref|XP_004161727.1| PREDICTED:
           RNA-binding protein Musashi homolog 1-like [Cucumis
           sativus]
          Length = 377

 Score =  127 bits (318), Expect = 2e-27
 Identities = 57/74 (77%), Positives = 71/74 (95%)
 Frame = -2

Query: 223 DKKLVVLGIPWDIETDGLQDYMARFGELEDCIVMKDRSSGRSRGFGYVTFSTVEDAKSAL 44
           D+KLVVLGIPWD++T+GL++YM++FGELEDCIVMK+RS+GRSRGFGYVTF+T EDAK+AL
Sbjct: 2   DRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNAL 61

Query: 43  ASEHCLGGRMLEVK 2
           +SEH LG RM+EVK
Sbjct: 62  SSEHFLGNRMMEVK 75


>ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
           gi|223537154|gb|EEF38787.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 359

 Score =  126 bits (317), Expect = 3e-27
 Identities = 57/74 (77%), Positives = 70/74 (94%)
 Frame = -2

Query: 223 DKKLVVLGIPWDIETDGLQDYMARFGELEDCIVMKDRSSGRSRGFGYVTFSTVEDAKSAL 44
           D+KLVVLGIPW+++T+GL++YM +FGEL+DCIVMK+RSSGRSRGFGYVTF++ EDAKSAL
Sbjct: 2   DRKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSAL 61

Query: 43  ASEHCLGGRMLEVK 2
           +SEH LG RMLEVK
Sbjct: 62  SSEHFLGNRMLEVK 75


>ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|238481137|ref|NP_001154290.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400
           [Arabidopsis thaliana] gi|23308345|gb|AAN18142.1|
           At4g36960/C7A10_400 [Arabidopsis thaliana]
           gi|332661324|gb|AEE86724.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|332661325|gb|AEE86725.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 379

 Score =  124 bits (311), Expect = 1e-26
 Identities = 56/74 (75%), Positives = 69/74 (93%)
 Frame = -2

Query: 223 DKKLVVLGIPWDIETDGLQDYMARFGELEDCIVMKDRSSGRSRGFGYVTFSTVEDAKSAL 44
           ++KLVVLGIPWDI++DGL+DYM++FG+LEDCIVMKDRS+GRSRGFGYVTF++ EDAK+AL
Sbjct: 2   ERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNAL 61

Query: 43  ASEHCLGGRMLEVK 2
             EH LG R+LEVK
Sbjct: 62  KGEHFLGNRILEVK 75


>ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 362

 Score =  124 bits (310), Expect = 2e-26
 Identities = 56/76 (73%), Positives = 69/76 (90%)
 Frame = -2

Query: 229 MSDKKLVVLGIPWDIETDGLQDYMARFGELEDCIVMKDRSSGRSRGFGYVTFSTVEDAKS 50
           M  +KLVVLGIPWDI+T+GL++YM++FGELEDCIVMK+RS+GRSRGFGYVTF++V+DAK 
Sbjct: 1   MEQRKLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKE 60

Query: 49  ALASEHCLGGRMLEVK 2
            L+SEH LG R LEVK
Sbjct: 61  VLSSEHILGNRTLEVK 76


>ref|XP_002866967.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297312803|gb|EFH43226.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 380

 Score =  123 bits (309), Expect = 2e-26
 Identities = 56/74 (75%), Positives = 69/74 (93%)
 Frame = -2

Query: 223 DKKLVVLGIPWDIETDGLQDYMARFGELEDCIVMKDRSSGRSRGFGYVTFSTVEDAKSAL 44
           ++KLVVLGIPWDI++DGL+DYM++FG+LEDCIVMKDRS+GRSRGFGYVTF++ EDAK+AL
Sbjct: 2   ERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSEDAKNAL 61

Query: 43  ASEHCLGGRMLEVK 2
             EH LG R+LEVK
Sbjct: 62  KGEHFLGNRILEVK 75


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