BLASTX nr result

ID: Cnidium21_contig00023773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023773
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...    99   1e-18
ref|XP_004167873.1| PREDICTED: uncharacterized protein LOC101225...    74   2e-11
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    70   5e-10
ref|XP_004142253.1| PREDICTED: uncharacterized protein LOC101219...    67   5e-09
ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794...    64   3e-08

>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 65/166 (39%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
 Frame = +1

Query: 103 MSRDMILRSPPLDRRQPLLLASTSKPSHR-------KTSKCLAEXXXXXXXXXXXXXXLP 261
           M+R +++R P L+RRQPLL + +S  S R        T++C A                P
Sbjct: 1   MTRQIVMRPPSLNRRQPLLASQSSSGSIRFAEVAGETTAECAA-----------VACCCP 49

Query: 262 VGVVAILFLAVYKVPAKLCXXXXXXXXXXXXXXXGSFSSSHDYRINRCDCGFDD---EVH 432
            G+V +L LAVYKVPA LC               G        R  RC CG DD   ++H
Sbjct: 50  CGLVNLLVLAVYKVPAGLCRRALKKKRLRRMIKKGLLQP----RRRRCPCGCDDTELQIH 105

Query: 433 MMSCDGGQV-VCGTSLEMDKDVMELEKEMWDRFYGTGFWRSLSQRE 567
            +S D     +   S E +++VM+LEKEMWD+FY TGFWRS SQRE
Sbjct: 106 PISGDVTDADISVKSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151


>ref|XP_004167873.1| PREDICTED: uncharacterized protein LOC101225028 [Cucumis sativus]
          Length = 159

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
 Frame = +1

Query: 103 MSRDMILRSPPLDRRQPLLLASTSKPSHR-------KTSKCLAEXXXXXXXXXXXXXXLP 261
           MS  ++ R P  +RRQPLL + ++  S R        T++C A                P
Sbjct: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAA-----------VCCCCP 49

Query: 262 VGVVAILFLAVYKVPAKLCXXXXXXXXXXXXXXXGSFSSSHDYRINRCDCGFDDEVHMMS 441
             V+  L LA+YKVPA LC               G   +    R  R   G  DE  +  
Sbjct: 50  CVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPA----RRGRFSFGGYDETDIQI 105

Query: 442 CDGGQVVCGT------SLEMDKDVMELEKEMWDRFYGTGFWRSLSQRE 567
              G++V  +      ++E ++ VMELEKEMW+ FY TGFWRS S+R+
Sbjct: 106 LSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRD 153


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
 Frame = +1

Query: 259 PVGVVAILFLAVYKVPAKLCXXXXXXXXXXXXXXXGSFSSSHDYRINRCDCGFDD---EV 429
           P G+V +L+LA+YKVPA LC               G   +    R  RC CG D+   ++
Sbjct: 123 PCGLVNLLYLAIYKVPAGLCRRALRRKRRKQLMKEGLLPA----RTKRCRCGCDETEIQI 178

Query: 430 H--MMSCDGGQVVCG------TSLEMDKDVMELEKEMWDRFYGTGFWRSLSQRE 567
           H  M+  D  +   G       + E D  +++LEKEMW+ FY TGFWRS SQRE
Sbjct: 179 HPEMIRLDEEETENGDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRE 232


>ref|XP_004142253.1| PREDICTED: uncharacterized protein LOC101219884 [Cucumis sativus]
           gi|449503475|ref|XP_004162021.1| PREDICTED:
           uncharacterized LOC101219884 [Cucumis sativus]
          Length = 147

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 52/157 (33%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
 Frame = +1

Query: 103 MSRDMILRSPPLDRRQPLLLASTSKPSHR-KTSKCLAEXXXXXXXXXXXXXX-LPVGVVA 276
           M++ ++LRSPP  R+QPLL     K  +R K  +  AE                P  ++ 
Sbjct: 1   MNQGVLLRSPPGTRQQPLL---RDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMN 57

Query: 277 ILFLAVYKVPAKLCXXXXXXXXXXXXXXXGSFSSSHDYRINRCDCGFDDEVHMMSCDGGQ 456
           +L L VYKVP  LC                +  +         D G + E      D G+
Sbjct: 58  LLILTVYKVPVGLCKKVWNKRGKRREIAKKNAGAGGKEWAGNDDGGGEKE------DWGE 111

Query: 457 VVCGTSLEMDKDVMELEKEMWDRFYGTGFWRSLSQRE 567
            +  + L  +   +ELEKEMW+RFYGTGFWR+ SQRE
Sbjct: 112 SLPSSYLSSED--IELEKEMWERFYGTGFWRTPSQRE 146


>ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794951 [Glycine max]
          Length = 195

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 59/178 (33%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
 Frame = +1

Query: 103 MSRDMILRSP--PLDRRQPLLLASTSKPSHRKT----------SKCLAEXXXXXXXXXXX 246
           MS  +ILR      +RRQPLLL    +PS   T          ++C+A            
Sbjct: 1   MSNRIILRQAGGSTNRRQPLLLQR--RPSKMATRVGEVVGGTAAECVA-----------V 47

Query: 247 XXXLPVGVVAILFLAVYKVPAKLCXXXXXXXXXXXXXXXGSFSSSHDYRINRCDCGFDDE 426
               P GV   L LA+YKVPA L                G    +  +    C CG  D+
Sbjct: 48  CCCFPCGVANFLLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRH----CSCGCCDD 103

Query: 427 VH------MMSCDGGQV--VCGTSLEMDKD---VMELEKEMWDRFYGTGFWRSLSQRE 567
           V       M + D   +  +  T+ E+D +      LEKEMWD+FYGTGFWRS S RE
Sbjct: 104 VSGSRIYPMCANDAVDIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNRE 161


Top