BLASTX nr result

ID: Cnidium21_contig00023735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023735
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150412.1| PREDICTED: coatomer subunit gamma-like [Cucu...   132   2e-28
ref|XP_003631645.1| PREDICTED: coatomer subunit gamma-2-like [Vi...   129   2e-27
ref|XP_003606893.1| Coatomer subunit gamma [Medicago truncatula]...   129   2e-27
ref|XP_002313799.1| predicted protein [Populus trichocarpa] gi|2...   128   3e-27
ref|XP_003527225.1| PREDICTED: coatomer subunit gamma-like [Glyc...   128   3e-27

>ref|XP_004150412.1| PREDICTED: coatomer subunit gamma-like [Cucumis sativus]
            gi|449496814|ref|XP_004160233.1| PREDICTED: coatomer
            subunit gamma-like [Cucumis sativus]
          Length = 887

 Score =  132 bits (331), Expect = 2e-28
 Identities = 103/302 (34%), Positives = 152/302 (50%), Gaps = 17/302 (5%)
 Frame = +3

Query: 192  LDESEFVMTRMFLHACLGKHIKSVRVNIGTGLESGYEVNAVKHTFEDEHVVLQYN-PNKI 368
            +D  E +++ +   A  GK  KS      T  E+ Y VN VKH F D HVV QYN  N I
Sbjct: 620  VDAYEKLLSSIPEFANFGKLFKSSAPVELTEAETEYAVNVVKHIF-DSHVVFQYNCTNTI 678

Query: 369  GERLSNNVSIVDYIVKNLAAGQVHVVVNALTDDFTKATMQPIQKIS----SKTFVSFEKP 536
             E+L  NV +V              V  +  ++F++   +P++ +      +TFV+FEKP
Sbjct: 679  PEQLLENVFVV--------------VDASDAEEFSEVISRPLRSLPYDSPGQTFVAFEKP 724

Query: 537  KGVASPGTFSNSLRC-----------GKDDLVDKEYSLENLEVVATDYISKSGVGKEFDD 683
            +GV++ G FSN LR             ++D V+ EY LE+LEVV+ DY+ K GV   F +
Sbjct: 725  EGVSAVGKFSNMLRFIVKEVDPSTGEAEEDGVEDEYQLEDLEVVSADYMLKVGV-SNFKN 783

Query: 684  QWKNYQGD-EIIKEYSLGRRESLSDAVDEVNKFFDMHPCESFDSXXXXXXXXXXXXXXXS 860
             W +   D E + EY LG RESL++AV  V     M PCE  ++                
Sbjct: 784  AWDSLGPDCERVDEYGLGPRESLAEAVGAVINLLGMQPCEGTEA---------------- 827

Query: 861  PLQIKENDTKYSVALSGKYMGTLEVLLKIDFKLDEETKAVKIDLKVRSNGIFGSRFIHET 1040
               +  N   ++  LSG Y+G ++VL+++ F +D  ++ V + L VRS+    S  IHE 
Sbjct: 828  ---VASNSRSHTCLLSGVYIGNVKVLVRLSFGID-SSREVAMKLAVRSDDEVVSDAIHEI 883

Query: 1041 VA 1046
            VA
Sbjct: 884  VA 885


>ref|XP_003631645.1| PREDICTED: coatomer subunit gamma-2-like [Vitis vinifera]
            gi|297741448|emb|CBI32579.3| unnamed protein product
            [Vitis vinifera]
          Length = 887

 Score =  129 bits (323), Expect = 2e-27
 Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 17/302 (5%)
 Frame = +3

Query: 192  LDESEFVMTRMFLHACLGKHIKSVRVNIGTGLESGYEVNAVKHTFEDEHVVLQYN-PNKI 368
            +D  E +++ +  +A  GK  KS      T  E+ Y VN VKH F D HVV QYN  N I
Sbjct: 620  VDAYEKLLSSIPEYASFGKPFKSSAPVELTEAETEYAVNVVKHIF-DRHVVFQYNCTNTI 678

Query: 369  GERLSNNVSIVDYIVKNLAAGQVHVVVNALTDDFTKATMQPIQKIS----SKTFVSFEKP 536
             E+L  NV+++              V  +  ++F++ + +P++ +      +TFV+FEKP
Sbjct: 679  PEQLLENVTVI--------------VDASDAEEFSEVSTKPLRSLPYDSPGQTFVAFEKP 724

Query: 537  KGVASPGTFSNSLRC-----------GKDDLVDKEYSLENLEVVATDYISKSGVGKEFDD 683
             GV + G FSN L+             ++D V+ EY LE+LEVVA DY+ K GV   F +
Sbjct: 725  DGVPAVGKFSNMLKFIVKEVDPTTGETEEDGVEDEYQLEDLEVVAADYVLKVGV-SNFRN 783

Query: 684  QWKNYQGD-EIIKEYSLGRRESLSDAVDEVNKFFDMHPCESFDSXXXXXXXXXXXXXXXS 860
             W++   + E + EY LG RESL++AV  V     + PCE  +                 
Sbjct: 784  AWESMGPEFERVDEYGLGPRESLAEAVSTVISLLGLQPCEGTE----------------- 826

Query: 861  PLQIKENDTKYSVALSGKYMGTLEVLLKIDFKLDEETKAVKIDLKVRSNGIFGSRFIHET 1040
               +  N   ++  LSG ++G ++VL+++ F +D   K V + L VRS     S  IHE 
Sbjct: 827  --VVPSNSRSHTCLLSGVFIGNMKVLVRLSFGID-GPKEVAMKLAVRSEDESVSDAIHEI 883

Query: 1041 VA 1046
            VA
Sbjct: 884  VA 885


>ref|XP_003606893.1| Coatomer subunit gamma [Medicago truncatula]
            gi|355507948|gb|AES89090.1| Coatomer subunit gamma
            [Medicago truncatula]
          Length = 885

 Score =  129 bits (323), Expect = 2e-27
 Identities = 102/288 (35%), Positives = 143/288 (49%), Gaps = 17/288 (5%)
 Frame = +3

Query: 234  ACLGKHIKSVRVNIGTGLESGYEVNAVKHTFEDEHVVLQYN-PNKIGERLSNNVSIVDYI 410
            A  GK  KS      T  E+ Y VN VKH F D HVV QYN  N I E+L  +V +V   
Sbjct: 632  ANFGKPFKSSAPVELTEAETEYAVNVVKHIF-DTHVVFQYNCTNTIPEQLLEDVIVV--- 687

Query: 411  VKNLAAGQVHVVVNALTDDFTKATMQPIQKIS----SKTFVSFEKPKGVASPGTFSNSLR 578
                       V  +  ++F++   +P++ +      + FV+FEKP+G+ + G FSN LR
Sbjct: 688  -----------VDASEAEEFSQVISKPLRSLPYDSPGQIFVAFEKPEGLPTSGKFSNILR 736

Query: 579  C-----------GKDDLVDKEYSLENLEVVATDYISKSGVGKEFDDQWKNYQGD-EIIKE 722
                         +DD V+ EY LE+LEVVA DYI K GV   F + W++   D E + E
Sbjct: 737  FIVKEVDPTSGEAEDDGVEDEYQLEDLEVVAADYILKVGV-SNFRNAWESMDPDSERVDE 795

Query: 723  YSLGRRESLSDAVDEVNKFFDMHPCESFDSXXXXXXXXXXXXXXXSPLQIKENDTKYSVA 902
            Y LG RE LS+AV+ V     M PCE  +                    +  N   ++  
Sbjct: 796  YGLGPREGLSEAVNTVITLLGMQPCEGTE-------------------VVPPNSRSHTCL 836

Query: 903  LSGKYMGTLEVLLKIDFKLDEETKAVKIDLKVRSNGIFGSRFIHETVA 1046
            LSG ++G ++VL+++ F LD   K V + L VRS+ +  S  IHE VA
Sbjct: 837  LSGVFIGGVKVLVRLSFGLD-GAKDVAMKLAVRSDDVTVSDAIHEIVA 883


>ref|XP_002313799.1| predicted protein [Populus trichocarpa] gi|222850207|gb|EEE87754.1|
            predicted protein [Populus trichocarpa]
          Length = 886

 Score =  128 bits (322), Expect = 3e-27
 Identities = 99/286 (34%), Positives = 142/286 (49%), Gaps = 18/286 (6%)
 Frame = +3

Query: 243  GKHIKSVRVNIGTGLESGYEVNAVKHTFEDEHVVLQYN-PNKIGERLSNNVSIVDYIVKN 419
            GK  KS      T  E+ Y VN VKH F D HVV QYN  N I E+L  NVS++      
Sbjct: 636  GKPFKSSAPVELTEAETEYAVNVVKHIF-DRHVVFQYNCTNTIPEQLLENVSVI------ 688

Query: 420  LAAGQVHVVVNALTDDFTKATMQPIQKIS----SKTFVSFEKPKGVASPGTFSNSLRC-- 581
                    V ++  D+F +   +P++ +      +TFV+FEKPKG+ + G FSN+LR   
Sbjct: 689  --------VDSSEADNFAEVASKPLRSLPYDTPGQTFVAFEKPKGITAVGKFSNTLRFIV 740

Query: 582  ---------GKDDLVDKEYSLENLEVVATDYISKSGVGKEFDDQWKNYQGDEI--IKEYS 728
                      ++D V+ EY LE+LEVVA DY+ K GV   F + W++  GDE   + EY 
Sbjct: 741  KEVDPTTGEAEEDGVEDEYQLEDLEVVAADYMMKVGV-SNFRNAWES-MGDEFEHVDEYG 798

Query: 729  LGRRESLSDAVDEVNKFFDMHPCESFDSXXXXXXXXXXXXXXXSPLQIKENDTKYSVALS 908
            LG RE+L++AV  V     M PCE  +                    +  N   ++  LS
Sbjct: 799  LGPRENLAEAVIAVINLLGMQPCEGTE-------------------VVATNSRSHTCLLS 839

Query: 909  GKYMGTLEVLLKIDFKLDEETKAVKIDLKVRSNGIFGSRFIHETVA 1046
            G ++G + VL ++ F +   ++ V + L VRS     S  IHE V+
Sbjct: 840  GVFLGNVRVLARLQFGI-HGSRDVAMKLAVRSEDEAVSDTIHEIVS 884


>ref|XP_003527225.1| PREDICTED: coatomer subunit gamma-like [Glycine max]
          Length = 882

 Score =  128 bits (321), Expect = 3e-27
 Identities = 100/301 (33%), Positives = 151/301 (50%), Gaps = 17/301 (5%)
 Frame = +3

Query: 195  DESEFVMTRMFLHACLGKHIKSVRVNIGTGLESGYEVNAVKHTFEDEHVVLQYN-PNKIG 371
            D  E +++ +   A  GK  KS      T  E+ Y VN +KH F D HVV QYN  N I 
Sbjct: 616  DAYERMLSTISECANFGKLFKSSAPVELTEAETEYAVNVIKHIF-DRHVVFQYNCTNTIP 674

Query: 372  ERLSNNVSIVDYIVKNLAAGQVHVVVNALTDDFTKATMQPIQKIS----SKTFVSFEKPK 539
            E+L      +++++  + A           D+F++   +P++ +      +TFV+FEKP+
Sbjct: 675  EQL------LEHVIVTVDASDA--------DEFSEVFSKPLRSLPYDSPGQTFVAFEKPE 720

Query: 540  GVASPGTFSNSLRC-----------GKDDLVDKEYSLENLEVVATDYISKSGVGKEFDDQ 686
            GV + G FSN L+             +DD V+ EY LE+LE+VA DY+ K GV   F + 
Sbjct: 721  GVPTVGKFSNILKFIVKEVDPTTGEAEDDGVEDEYQLEDLEIVAADYVLKVGV-SNFRNA 779

Query: 687  WKNYQGD-EIIKEYSLGRRESLSDAVDEVNKFFDMHPCESFDSXXXXXXXXXXXXXXXSP 863
            W++   D E + EY LG RESL++AV+ V     + PCE  +                  
Sbjct: 780  WESLGPDFERVDEYGLGPRESLAEAVNTVINLLGLEPCEGTE------------------ 821

Query: 864  LQIKENDTKYSVALSGKYMGTLEVLLKIDFKLDEETKAVKIDLKVRSNGIFGSRFIHETV 1043
             ++  N   ++  LSG ++G ++VL+++ F LD   K V + L VRS     S  IHE V
Sbjct: 822  -EVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLD-GPKDVAMKLSVRSEDETVSDAIHEIV 879

Query: 1044 A 1046
            A
Sbjct: 880  A 880


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