BLASTX nr result

ID: Cnidium21_contig00023717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023717
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]   238   3e-60
ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267...   237   5e-60
emb|CBI20933.3| unnamed protein product [Vitis vinifera]              221   2e-55
ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808...   217   4e-54
ref|XP_002532142.1| transcription elongation factor s-II, putati...   209   8e-52

>emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
          Length = 1059

 Score =  238 bits (606), Expect = 3e-60
 Identities = 164/374 (43%), Positives = 192/374 (51%), Gaps = 40/374 (10%)
 Frame = -3

Query: 1155 DDRASLREVIDSYVLDERLGFAEPASGMELYLCPPHPKILELLGKHLSKDQTELINSTDN 976
            D RA+L EV DSYVLDER+GFAEPA GMELY CPPH   LE++ KHL KDQTE +NSTDN
Sbjct: 698  DGRANLCEVADSYVLDERVGFAEPAPGMELYFCPPHTXTLEMISKHLYKDQTETLNSTDN 757

Query: 975  GLIGVVVWRKAHTSSTISPNSTLHHKHSSKKQQ--NFRRQEKTTNVNANMTSRTPVPSTP 802
            GLIGVVVWRKA  +STISPNS+  HKH +KKQ     R  EK  N+N+N TS+   P   
Sbjct: 758  GLIGVVVWRKAQLTSTISPNSSSLHKHGTKKQHFSTRRHHEKDANMNSNFTSKPSHPLGS 817

Query: 801  APIRSVALXXXXXXXXXXXXXXXGNSRDDDDLPEFSFSGNSNPT--PQSSRLT------- 649
            AP  ++                   SRD+DDLPEF FSG SN +  P S+R T       
Sbjct: 818  AP--NIPEPSTDDDDDIPPGFGPAASRDEDDLPEFQFSGGSNSSTAPFSARTTPGGPGVA 875

Query: 648  --SNPPH-PSRPVDQIRELIQKYGKPAESDSTKNWQDK-RSAGLGIQAWXXXXXD-IPEW 484
              + PPH P RPV+Q+R+LIQKYG+     S+ NW+DK R  G   Q W     D IPEW
Sbjct: 876  PFNQPPHNPPRPVEQMRQLIQKYGQSGAQPSSGNWRDKGRIIGHVTQPWADDDDDDIPEW 935

Query: 483  RPDAPLTQV----PTRPPARGFH-QPMQPHMVNQSATAQHVMSP---------------- 367
            +P AP  Q+    PT PP  GF  QP+ P  + Q   A     P                
Sbjct: 936  QPQAPQQQLHPPQPT-PPVYGFQAQPVLPXHMQQHLGAAQPQQPLGPLPTPLSMTLQSLQ 994

Query: 366  QVAXXXXXXXXXXXPSWQQG---GGRWVAQAPGFQQNSLGSQLNVXXXXXXXXXXXXXXX 196
                          PSWQQ    G  WV   P   Q     Q N                
Sbjct: 995  SSVNLVQAPQNPPTPSWQQQQQQGSWWVP--PSGPQGLPSVQGNAPYPGTGQTGI----- 1047

Query: 195  XGNWRRDAPRSRGF 154
              NWR+D PRSRGF
Sbjct: 1048 --NWRQDVPRSRGF 1059


>ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
          Length = 1146

 Score =  237 bits (604), Expect = 5e-60
 Identities = 164/374 (43%), Positives = 193/374 (51%), Gaps = 40/374 (10%)
 Frame = -3

Query: 1155 DDRASLREVIDSYVLDERLGFAEPASGMELYLCPPHPKILELLGKHLSKDQTELINSTDN 976
            D RA+L EV DSYVLDER+GFAEPA GMELY CPPH + LE++ KHL KDQTE +NSTDN
Sbjct: 785  DGRANLCEVADSYVLDERVGFAEPAPGMELYFCPPHTRTLEMISKHLYKDQTETLNSTDN 844

Query: 975  GLIGVVVWRKAHTSSTISPNSTLHHKHSSKKQQ--NFRRQEKTTNVNANMTSRTPVPSTP 802
            GLIGVVVWRKA  +STISPNS+  HKH +KKQ     R  EK  N+N+N TS+   P   
Sbjct: 845  GLIGVVVWRKAQLTSTISPNSSSLHKHGTKKQHFSTRRHHEKDANMNSNFTSKPSHPLGS 904

Query: 801  APIRSVALXXXXXXXXXXXXXXXGNSRDDDDLPEFSFSGNSNPT--PQSSRLT------- 649
            AP  ++                   SRD+DDLPEF FSG SN +  P S+R T       
Sbjct: 905  AP--NIPEPSTDDDDDIPPGFGPAASRDEDDLPEFQFSGGSNSSTAPFSARTTPGGPGVA 962

Query: 648  --SNPPHPS-RPVDQIRELIQKYGKPAESDSTKNWQDK-RSAGLGIQAWXXXXXD-IPEW 484
              + PPH S RPV+Q+R+LIQKYG+     S+ NW+DK R  G   Q W     D IPEW
Sbjct: 963  PFNQPPHNSPRPVEQMRQLIQKYGQSGAQPSSGNWRDKGRIIGHVTQPWADDDDDDIPEW 1022

Query: 483  RPDAPLTQV----PTRPPARGFH-QPMQPHMVNQSATAQHVMSP---------------- 367
            +P AP  Q+    PT PP  GF  QP+ P  + Q   A     P                
Sbjct: 1023 QPQAPQQQLQPPQPT-PPVYGFQAQPVLPTHMQQHLGAAQPQQPLGPLPTPLSMTLQSLQ 1081

Query: 366  QVAXXXXXXXXXXXPSWQQG---GGRWVAQAPGFQQNSLGSQLNVXXXXXXXXXXXXXXX 196
                          PSWQQ    G  WV   P   Q     Q N                
Sbjct: 1082 SSVNLVQAPQNPPTPSWQQQQQQGSWWVP--PSGPQGLPSVQGNAPYPGTGQTGI----- 1134

Query: 195  XGNWRRDAPRSRGF 154
              NWR+D PRSRGF
Sbjct: 1135 --NWRQDVPRSRGF 1146


>emb|CBI20933.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  221 bits (564), Expect = 2e-55
 Identities = 159/373 (42%), Positives = 186/373 (49%), Gaps = 39/373 (10%)
 Frame = -3

Query: 1155 DDRASLREVIDSYVLDERLGFAEPASGMELYLCPPHPKILELLGKHLSKDQTELINSTDN 976
            D RA+L EV DSYVLDER+GFAEPA GMELY CPPH + LE++ KHL KDQTE +NSTDN
Sbjct: 749  DGRANLCEVADSYVLDERVGFAEPAPGMELYFCPPHTRTLEMISKHLYKDQTETLNSTDN 808

Query: 975  GLIGVVVWRKAHTSSTISPNSTLHHKHSSKKQQ--NFRRQEKTTNVNANMTSRTPVPSTP 802
            GLIGVVVWRKA  +STISPNS+  HKH +KKQ     R  EK  N+N+N TS+   P   
Sbjct: 809  GLIGVVVWRKAQLTSTISPNSSSLHKHGTKKQHFSTRRHHEKDANMNSNFTSKPSHPLGS 868

Query: 801  APIRSVALXXXXXXXXXXXXXXXGNSRDDDDLPEFSFSGNSNPT--PQSSRLT------- 649
            AP  ++                   SRD+DDLPEF FSG SN +  P S+R T       
Sbjct: 869  AP--NIPEPSTDDDDDIPPGFGPAASRDEDDLPEFQFSGGSNSSTAPFSARTTPGGPGVA 926

Query: 648  --SNPPHPS-RPVDQIRELIQKYGKPAESDSTKNWQDKRSAGLGIQAWXXXXXD-IPEWR 481
              + PPH S RPV+Q+R+LIQKYG+             R  G   Q W     D IPEW+
Sbjct: 927  PFNQPPHNSPRPVEQMRQLIQKYGQ------------SRIIGHVTQPWADDDDDDIPEWQ 974

Query: 480  PDAPLTQV----PTRPPARGFH-QPMQPHMVNQSATAQHVMSP----------------Q 364
            P AP  Q+    PT PP  GF  QP+ P  + Q   A     P                 
Sbjct: 975  PQAPQQQLQPPQPT-PPVYGFQAQPVLPTHMQQHLGAAQPQQPLGPLPTPLSMTLQSLQS 1033

Query: 363  VAXXXXXXXXXXXPSWQQG---GGRWVAQAPGFQQNSLGSQLNVXXXXXXXXXXXXXXXX 193
                         PSWQQ    G  WV   P   Q     Q N                 
Sbjct: 1034 SVNLVQAPQNPPTPSWQQQQQQGSWWVP--PSGPQGLPSVQGNAPYPGTGQTGI------ 1085

Query: 192  GNWRRDAPRSRGF 154
             NWR+D PRSRGF
Sbjct: 1086 -NWRQDVPRSRGF 1097


>ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
          Length = 1143

 Score =  217 bits (553), Expect = 4e-54
 Identities = 123/276 (44%), Positives = 164/276 (59%), Gaps = 12/276 (4%)
 Frame = -3

Query: 1155 DDRASLREVIDSYVLDERLGFAEPASGMELYLCPPHPKILELLGKHLSKDQTELINSTDN 976
            DD+++LREV DSY+LDER+GFAEP  G+ELY CPPH K +E+L   L K+Q E +NS DN
Sbjct: 828  DDQSTLREVADSYILDERVGFAEPVPGVELYFCPPHKKTVEMLSNILPKEQIEPVNSIDN 887

Query: 975  GLIGVVVWRKAHTSSTISPNSTLHHKHSSKKQQNFRRQEKTTNVNANMTSRTPVPSTPAP 796
            GLIG++VWRK + +S+ISP +  HHKHSSK+Q  F R+++  NVNAN T +  VPS    
Sbjct: 888  GLIGIIVWRKTNLTSSISPTTASHHKHSSKRQY-FSRRQQDINVNANSTHKA-VPSMGVK 945

Query: 795  IRSVALXXXXXXXXXXXXXXXGNSRDDDDLPEFSFSGNSNPT---------PQSSRLTSN 643
                                   +R +DDLPEF+FSG+SNP+         P    L S 
Sbjct: 946  TTE------NDDDDVPPGFGPPAARVEDDLPEFNFSGSSNPSHLGQKSMGPPNMVPLHSA 999

Query: 642  PPHPSRPVDQIRELIQKYGKPAESDSTKNWQDKRSAGLGIQAWXXXXXDIPEWRPDAPLT 463
             P P RP +Q+REL+ KYG+   +  + NWQDK   G  IQ W     DIPEW+P     
Sbjct: 1000 NPAPPRPAEQMRELVHKYGQNKPNVPSVNWQDK--FGGTIQPWNDDDDDIPEWQPQNSQN 1057

Query: 462  QVPTRPPARGFHQPMQPHMVNQS---ATAQHVMSPQ 364
            Q P +     FH  ++PH++NQS   +  Q +M+PQ
Sbjct: 1058 QFPPQQTMHNFH--LRPHILNQSFPGSQQQPIMTPQ 1091


>ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
            gi|223528178|gb|EEF30241.1| transcription elongation
            factor s-II, putative [Ricinus communis]
          Length = 1154

 Score =  209 bits (533), Expect = 8e-52
 Identities = 150/412 (36%), Positives = 193/412 (46%), Gaps = 79/412 (19%)
 Frame = -3

Query: 1152 DRASLREVIDSYVLDERLGFAEPASGMELYLCPPHPKILELLGKHLSKDQTELINSTDNG 973
            + A + EV DSYV+D R+GF EPA G+ELYLCPPH K  E+LGK L KDQ + +N+ DNG
Sbjct: 756  ESAGVSEVADSYVMDSRVGFGEPAPGVELYLCPPHSKTREMLGKVLPKDQVDALNAIDNG 815

Query: 972  LIGVVVWRKAHTSSTISPNSTLHHKHSSKKQQ--NFRRQEKTTNVNANMTSR-TPVP--- 811
            LIGV+VWRK   +STISPNS  HHKH+SKK+   + R QEK  N+N N+T++  P+P   
Sbjct: 816  LIGVIVWRKPQITSTISPNSASHHKHNSKKEHFTSRRHQEKDANLNVNVTAKQQPLPLAG 875

Query: 810  ----STPAPIRSVALXXXXXXXXXXXXXXXGNSRDDDDLPEFSF-SGNSNPTPQSSRLTS 646
                + P P  +                    +RD DDLPEF+F SG+  P  Q+S   S
Sbjct: 876  PSAFTKPQPDDN----EDDDDDDLPPGFGPPATRDGDDLPEFNFSSGSVTPRSQTSTTQS 931

Query: 645  ------------NPPHPSRPVDQIRELIQKYGKPAESDSTKNWQDKRSAGLGIQAWXXXX 502
                        +    SRPVDQ+REL+ +YG+P  S S+ NWQDKR  G+ +Q W    
Sbjct: 932  VIQGQGMSHFHQHSQAHSRPVDQMRELVHRYGQPKTSTSSGNWQDKRGFGVVVQPWDDDD 991

Query: 501  XDIPEWRPDAPLTQVPTRPP--------ARGFHQP------------------------- 421
             D+PEWRP+    QVP   P          G  QP                         
Sbjct: 992  DDMPEWRPE-DNKQVPHPRPHTHSQPVHMHGIQQPILRANMIQETPHQQMAQQPMSLQPM 1050

Query: 420  MQPHMVNQS--ATAQHVMSPQVAXXXXXXXXXXXPSWQQGG---------------GRWV 292
            ++P+MV ++    AQ  M                PSWQQ G               G W+
Sbjct: 1051 LRPNMVQETPQQMAQPAMPLHSQMNGIHGHQNTAPSWQQQGPWMVQQNSAPLWQQQGPWM 1110

Query: 291  AQAPG------FQQNSLGSQLNVXXXXXXXXXXXXXXXXGNWRRDAPRSRGF 154
               PG      +Q NS+                        WRRDAP SRGF
Sbjct: 1111 VPNPGSHGLPVYQPNSV--------QFYGAPGPEAGQQGMAWRRDAPASRGF 1154


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