BLASTX nr result

ID: Cnidium21_contig00023713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023713
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18074.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002267147.1| PREDICTED: uncharacterized protein LOC100267...    83   3e-14
ref|XP_002323050.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002533826.1| protein transporter, putative [Ricinus commu...    74   2e-11
ref|XP_002881591.1| predicted protein [Arabidopsis lyrata subsp....    67   2e-09

>emb|CBI18074.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/91 (56%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
 Frame = +3

Query: 3   YRPMQGAGSLQQVNSA-----HGTYVAGDGQLSSRPTGNAPAVGQKTFVPSYRLFEDLNV 167
           Y PMQG   LQQ NS      +G  + GDG++   P    PA G K F+PSYRLFEDLNV
Sbjct: 503 YMPMQGPRPLQQYNSFSSKGNNGLAMNGDGRVPG-PRNPVPASGNKPFIPSYRLFEDLNV 561

Query: 168 LGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 254
           LGN DGR K T++ SPSLSGT +Q M GG K
Sbjct: 562 LGNTDGRLKMTSSASPSLSGTSSQGMVGGRK 592


>ref|XP_002267147.1| PREDICTED: uncharacterized protein LOC100267076 [Vitis vinifera]
          Length = 625

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/91 (56%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
 Frame = +3

Query: 3   YRPMQGAGSLQQVNSA-----HGTYVAGDGQLSSRPTGNAPAVGQKTFVPSYRLFEDLNV 167
           Y PMQG   LQQ NS      +G  + GDG++   P    PA G K F+PSYRLFEDLNV
Sbjct: 536 YMPMQGPRPLQQYNSFSSKGNNGLAMNGDGRVPG-PRNPVPASGNKPFIPSYRLFEDLNV 594

Query: 168 LGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 254
           LGN DGR K T++ SPSLSGT +Q M GG K
Sbjct: 595 LGNTDGRLKMTSSASPSLSGTSSQGMVGGRK 625


>ref|XP_002323050.1| predicted protein [Populus trichocarpa] gi|222867680|gb|EEF04811.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
 Frame = +3

Query: 3   YRPMQGAGSLQQVNS-----AHGTYVAGDGQLSSRPTGNAPAVGQKTFVPSYRLFEDLNV 167
           Y PMQ A  +QQ NS      +G+ + GD   +SR    AP   +++FVPSYRLF+DLNV
Sbjct: 566 YTPMQAARPMQQFNSLPTRVGNGSIINGDSSSASRVP--APPGQKQSFVPSYRLFDDLNV 623

Query: 168 LGNGDGRSKTN-NTSPSLSGTT-QSMGGGWK 254
           LGN DGR K N +T PSLSG++ QSM GG K
Sbjct: 624 LGNADGRFKMNGSTPPSLSGSSGQSMVGGRK 654


>ref|XP_002533826.1| protein transporter, putative [Ricinus communis]
           gi|223526243|gb|EEF28561.1| protein transporter,
           putative [Ricinus communis]
          Length = 734

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 47/91 (51%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
 Frame = +3

Query: 3   YRPMQGAGSLQQVNS-----AHGTYVAGDGQLSSRPTGNAPAVGQKTFVPSYRLFEDLNV 167
           Y P Q   S+Q  NS     ++   + G+   SS P    P  GQK F+PSYRLFEDLNV
Sbjct: 645 YTPAQAPRSMQHNNSFNSRGSNALAMNGNPWASSGPRNTTPP-GQKPFIPSYRLFEDLNV 703

Query: 168 LGNGDGRSKTN-NTSPSLSG-TTQSMGGGWK 254
           LGN DGR K N +TSPSLSG ++Q M GG K
Sbjct: 704 LGNADGRFKMNGSTSPSLSGPSSQGMVGGRK 734


>ref|XP_002881591.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327430|gb|EFH57850.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 671

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
 Frame = +3

Query: 27  SLQQVNSAHGTYVAGDGQLSSRPTGNAPAVGQKTFVPSYRLFEDLNVLGNGDGRSK---T 197
           SLQQ NS      AGD Q +S  +    +VGQK FVPSYRLFEDL+V G+ DG++K   +
Sbjct: 591 SLQQSNSFPTR--AGDPQATSTASNPGVSVGQKPFVPSYRLFEDLDVFGSADGKNKPTNS 648

Query: 198 NNTSPSLSG--TTQSMGGGWK 254
           +N S SLSG  T QSM GG K
Sbjct: 649 SNGSQSLSGSQTQQSMIGGRK 669


Top