BLASTX nr result

ID: Cnidium21_contig00023712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023712
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82955.1| hypothetical protein VITISV_005180 [Vitis vinifera]   103   1e-20
ref|XP_004156011.1| PREDICTED: carbon catabolite repressor prote...    96   3e-18
ref|XP_004146381.1| PREDICTED: LOW QUALITY PROTEIN: carbon catab...    96   3e-18
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...    86   2e-15
ref|NP_001146094.1| uncharacterized protein LOC100279626 [Zea ma...    86   4e-15

>emb|CAN82955.1| hypothetical protein VITISV_005180 [Vitis vinifera]
          Length = 622

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/107 (49%), Positives = 71/107 (66%)
 Frame = -1

Query: 328 VKREGITWIKLGSSRSYVPSSDDVGLTLKLECVPVDHSTGVHLSPVFVILTNPVIVFPAP 149
           V+REG TWIK+GSS +YVPS DD G  L  E + +D S G  LS +  I+T+PVI+ P P
Sbjct: 145 VEREGKTWIKVGSSETYVPSMDDFGFCLMFESLAIDCSLGFPLSEIKSIMTDPVIIPPHP 204

Query: 148 CPRCMISVGSAMKSECSSSGPRSTSGINFTVLSYNILADLYASRNAH 8
           CPR MI +    +        +S++   F+VLSYNIL+D+YASR+AH
Sbjct: 205 CPRHMIQIQHLKEPRNIVFESQSSNADTFSVLSYNILSDIYASRSAH 251


>ref|XP_004156011.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1-like
           [Cucumis sativus]
          Length = 603

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = -1

Query: 316 GITWIKLGSSRSYVPSSDDVGLTLKLECVPVDHSTGVHLSPVFVILTNPVIVFPAPCPRC 137
           G TW ++G S++Y PS+DD+G  LK ECV VD  + +   PV  +LT+ VI  P+P PRC
Sbjct: 169 GETWFEVGRSKTYTPSADDIGHVLKFECVVVDAESKLASGPVNTLLTSRVIPAPSPSPRC 228

Query: 136 MISV-GSAMKSECSSSGPRSTSGINFTVLSYNILADLYASRNAH 8
           ++ V G  +  +  SSG  S+SG +FTVLSYNILAD+YA+  ++
Sbjct: 229 LVPVSGVDVIGQLDSSGRASSSG-SFTVLSYNILADVYATSESY 271


>ref|XP_004146381.1| PREDICTED: LOW QUALITY PROTEIN: carbon catabolite repressor protein
           4 homolog 1-like [Cucumis sativus]
          Length = 608

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = -1

Query: 316 GITWIKLGSSRSYVPSSDDVGLTLKLECVPVDHSTGVHLSPVFVILTNPVIVFPAPCPRC 137
           G TW ++G S++Y PS+DD+G  LK ECV VD  + +   PV  +LT+ VI  P+P PRC
Sbjct: 169 GETWFEVGRSKTYTPSADDIGHVLKFECVVVDAESKLASGPVNTLLTSRVIPAPSPSPRC 228

Query: 136 MISV-GSAMKSECSSSGPRSTSGINFTVLSYNILADLYASRNAH 8
           ++ V G  +  +  SSG  S+SG +FTVLSYNILAD+YA+  ++
Sbjct: 229 LVPVSGVDVIGQLDSSGRASSSG-SFTVLSYNILADVYATSESY 271


>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = -1

Query: 316 GITWIKLGSSRSYVPSSDDVGLTLKLECVPVDHSTGVHLSPVFVILTNPVIVFPAPCPRC 137
           G TW ++G S++Y PS+DD+G  LK ECV VD  T + +     +LT+ VI  P+P PR 
Sbjct: 169 GETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVGHSNTLLTSRVIPAPSPTPRR 228

Query: 136 MISV-GSAMKSECSSSGPRSTSGINFTVLSYNILADLYASRNAH 8
           +ISV G    +   S G  S+SG  FTVLSYNIL+D+YA+ + +
Sbjct: 229 LISVSGLDAMAPLDSDGRISSSG-TFTVLSYNILSDVYATNDTY 271


>ref|NP_001146094.1| uncharacterized protein LOC100279626 [Zea mays]
           gi|219885683|gb|ACL53216.1| unknown [Zea mays]
           gi|414871444|tpg|DAA50001.1| TPA: hypothetical protein
           ZEAMMB73_180774 [Zea mays] gi|414871445|tpg|DAA50002.1|
           TPA: hypothetical protein ZEAMMB73_180774 [Zea mays]
           gi|414871446|tpg|DAA50003.1| TPA: hypothetical protein
           ZEAMMB73_180774 [Zea mays]
          Length = 605

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/106 (43%), Positives = 61/106 (57%)
 Frame = -1

Query: 325 KREGITWIKLGSSRSYVPSSDDVGLTLKLECVPVDHSTGVHLSPVFVILTNPVIVFPAPC 146
           K  G TW ++G SR+Y P++DD+G  LK ECV VD      + P   I+T+ VI  P P 
Sbjct: 169 KNSGETWFEVGRSRTYTPTADDIGHALKFECVAVDSEKKSPIGPSTSIMTSRVIPAPTPT 228

Query: 145 PRCMISVGSAMKSECSSSGPRSTSGINFTVLSYNILADLYASRNAH 8
           PR +I V   +          S+ G  FTVLSYNILAD YA+ +A+
Sbjct: 229 PRRLIQVNGDVLGHLDLDSQISSLG-TFTVLSYNILADAYATTDAY 273


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