BLASTX nr result
ID: Cnidium21_contig00023706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00023706
(1086 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 162 1e-37
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ... 161 3e-37
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ... 161 3e-37
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 159 1e-36
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ... 149 9e-34
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 162 bits (411), Expect = 1e-37
Identities = 101/364 (27%), Positives = 164/364 (45%), Gaps = 5/364 (1%)
Frame = -2
Query: 1082 IPQNGTRDRLAWVHSNDGQYSVRSGYH----YWQSRHSANDEILTASGWGRLWRLCIPHK 915
+P + D+++W G+Y+ RSGY + QS ++ + W +LW++ P K
Sbjct: 460 LPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPK 519
Query: 914 IKVLLWRICRNTVPVRDRLRGKGVNVPNNCTMCTGNVEHLLHLFWDCEFAKACWQHIGVV 735
I WR RN +P R L + V+ P C +C +E LH +C A+ W G+
Sbjct: 520 ILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLA 579
Query: 734 LDTTEVEGTSDWVLSKLSTEPNDRLIKIATVVWGVWWARNKMVWEGKWMTPKIAMDWSSK 555
+ DW+ + + K V WG+WW RN +VW G+ + ++
Sbjct: 580 MLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFT 639
Query: 554 QVSDWRLAHRKKLQNSLHLQGDKVQHVNKWNAPAEGLWKLNVDASVFDSADFFSIGMVIR 375
+ W A+ +L + +KW P G K+NVD +VF D +IG V R
Sbjct: 640 MLESWFHANE-----TLATAVTVPSYSSKWQKPDYGWIKINVDGAVFP--DKGAIGAVFR 692
Query: 374 DHRGSFIHGRTLRFAGRVEVLEAEMVGIAEALKWTADYSGQSFCIESDSLLSVQAIKGEH 195
DH+G F+ G F + E +G+ E L W + S +E+D L VQAI+ +
Sbjct: 693 DHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKS 752
Query: 194 QNLLEVGVLIDYCRTLISSRLNVSLCFVKKQANRVAHLLARLPCTLNSFSDYS-SPPLSV 18
G +I C ++ ++V + + ++ AN AH LA C+ S + +PP +
Sbjct: 753 CPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSLHIWGYTPPQCI 812
Query: 17 LETL 6
L L
Sbjct: 813 LSCL 816
>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 519
Score = 161 bits (407), Expect = 3e-37
Identities = 108/377 (28%), Positives = 166/377 (44%), Gaps = 32/377 (8%)
Frame = -2
Query: 1061 DRLAWVHSNDGQYSVRSGYHYWQSRHSANDEILTASGWGRLWRLCIPHKIKVLLWRICRN 882
DR+ W NDG+YSVRS Y + W +WRL +P KIK +WR+CR
Sbjct: 131 DRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRG 190
Query: 881 TVPVRDRLRGKGVNVPNNCTMCTGNVEHLLHLFWDCEFAKACWQHIGVVLDTTEVE---G 711
+P R++LR KGV P C C+ E + HLF C F WQ + + +
Sbjct: 191 VLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFD 250
Query: 710 TSDWVLSKLSTEPNDRLIKIATVVWGVWWARNKMVWEGKWMTPKIAMDWSSKQVSDWRLA 531
T+ V+ L +I +W +W RN VWE K + + +D + + +W+LA
Sbjct: 251 TASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAMTVDRARVMMEEWQLA 310
Query: 530 ---------HRKKLQNS---------LHLQGDKVQHV----------NKWNAPAEGLWKL 435
LQN +HLQ V W P+ G +K
Sbjct: 311 TATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVASAVSAQQSLVPSISWERPSRGRFKC 370
Query: 434 NVDASVFDSADFFSIGMVIRDHRGSFIHGRTLRFAGRVEVLEAEMVGIAEALKWTADYSG 255
NVDA S + IG+ +RD G+++ +T+ F V E +G+ AL+W +D
Sbjct: 371 NVDAGFSTSKNRIGIGICVRDDDGAYVLAKTISFDVVHPVRVGEALGLYHALEWLSDMQF 430
Query: 254 QSFCIESDSLLSVQAIKGEHQNLLEVGVLIDYCRTLISSRL-NVSLCFVKKQANRVAHLL 78
+ DS ++ A + ++ E G +I ++L S+ N + F+++QAN AH
Sbjct: 431 DNMDFAMDSKITYDAFNSQKDDISEFGHIISARQSLFSTHFTNSRVEFIRRQANAAAHAF 490
Query: 77 ARLPCTLNSFSDYSSPP 27
A +L S Y + P
Sbjct: 491 AGEATSLTSPVIYFNIP 507
>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 612
Score = 161 bits (407), Expect = 3e-37
Identities = 108/377 (28%), Positives = 166/377 (44%), Gaps = 32/377 (8%)
Frame = -2
Query: 1061 DRLAWVHSNDGQYSVRSGYHYWQSRHSANDEILTASGWGRLWRLCIPHKIKVLLWRICRN 882
DR+ W NDG+YSVRS Y + W +WRL +P KIK +WR+CR
Sbjct: 224 DRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRG 283
Query: 881 TVPVRDRLRGKGVNVPNNCTMCTGNVEHLLHLFWDCEFAKACWQHIGVVLDTTEVE---G 711
+P R++LR KGV P C C+ E + HLF C F WQ + + +
Sbjct: 284 VLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFD 343
Query: 710 TSDWVLSKLSTEPNDRLIKIATVVWGVWWARNKMVWEGKWMTPKIAMDWSSKQVSDWRLA 531
T+ V+ L +I +W +W RN VWE K + + +D + + +W+LA
Sbjct: 344 TASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAMTVDRARVMMEEWQLA 403
Query: 530 ---------HRKKLQNS---------LHLQGDKVQHV----------NKWNAPAEGLWKL 435
LQN +HLQ V W P+ G +K
Sbjct: 404 TATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVASAVSAQQSLVPSISWERPSRGRFKC 463
Query: 434 NVDASVFDSADFFSIGMVIRDHRGSFIHGRTLRFAGRVEVLEAEMVGIAEALKWTADYSG 255
NVDA S + IG+ +RD G+++ +T+ F V E +G+ AL+W +D
Sbjct: 464 NVDAGFSTSKNRIGIGICVRDDDGAYVLAKTISFDVVHPVRVGEALGLYHALEWLSDMQF 523
Query: 254 QSFCIESDSLLSVQAIKGEHQNLLEVGVLIDYCRTLISSRL-NVSLCFVKKQANRVAHLL 78
+ DS ++ A + ++ E G +I ++L S+ N + F+++QAN AH
Sbjct: 524 DNMDFAMDSKITYDAFNSQKDDISEFGHIISARQSLFSTHFTNSRVEFIRRQANAAAHAF 583
Query: 77 ARLPCTLNSFSDYSSPP 27
A +L S Y + P
Sbjct: 584 AGEATSLTSPVIYFNIP 600
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 159 bits (401), Expect = 1e-36
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 5/321 (1%)
Frame = -2
Query: 950 WGRLWRLCIPHKIKVLLWRICRNTVPVRDRLRGKGVNVPNNCTMCTGNVEHLLHLFWDCE 771
W LW L +P K+K LWR CRN +P R RL+ +GVN C +C E +HLF+ C
Sbjct: 1417 WVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCT 1476
Query: 770 FAKACWQHIGV---VLDTTEVEGTSDWVLSKLSTE-PNDRLIKIATVVWGVWWARNKMVW 603
++ CWQ +G+ V ++ + + ++ E + + + A V+W +W RN +W
Sbjct: 1477 KSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIW 1536
Query: 602 EGKWMTPKIAMDWSSKQVSDWRLAHRKKLQNSLHLQGDKVQHVNKWNAPAEGLWKLNVDA 423
+ MT D ++ W+ A + W P EG +K NVDA
Sbjct: 1537 RNEVMTTAAVRDRGLNLLTGWQNAQ------------------DIWRKPDEGHFKCNVDA 1578
Query: 422 SVFDSADFFSIGMVIRDHRGSFIHGRTLRFAGRVEVLEAEMVGIAEALKWTADYSGQSFC 243
+ F ++ IG+ IRD G + RT ++V E E +G+ A++W + + +
Sbjct: 1579 AFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNIT 1638
Query: 242 IESDSLLSVQAIKGEHQNLLEVGVLIDYCRTLISSRL-NVSLCFVKKQANRVAHLLARLP 66
E DS V + ++ ++G +I CRT SS N + F+++QAN V H LAR
Sbjct: 1639 FELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFIRRQANEVVHSLARAA 1698
Query: 65 CTLNSFSDYSSPPLSVLETLV 3
S ++ P + + L+
Sbjct: 1699 TFYASIHYFTVLPDCIQDVLI 1719
>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 393
Score = 149 bits (377), Expect = 9e-34
Identities = 97/373 (26%), Positives = 159/373 (42%), Gaps = 21/373 (5%)
Frame = -2
Query: 1061 DRLAWVHSNDGQYSVRSGYHYWQSRHSANDEILTASGWGRLWRLCIPHKIKVLLWRICRN 882
D L W +G YSV+S Y N + W +WRL +P ++K L+WR+CR
Sbjct: 19 DSLLWKVEKNGCYSVKSAYRVCVEDVVNNAHLRKPGYWSGIWRLKVPPRVKKLVWRVCRE 78
Query: 881 TVPVRDRLRGKGVNVPNNCTMCTGNVEHLLHLFWDCEFAKACWQHIGV----VLDTTEVE 714
P R RL +GVN P+ C C E H+F+ C A W V ++ +
Sbjct: 79 CFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFD 138
Query: 713 GTSDWVLSKLSTEPNDRLIKIATVVWGVWWARNKMVWEGKWMTPKIAMDWSSKQVSDWRL 534
D + + L ++ I T++W +W +RN +W+ + ++ + + WR
Sbjct: 139 NAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRK 198
Query: 533 A-HRKKLQNSLHLQGDKVQHVN------------KWNAPAEGLWKLNVDASVFDSADFFS 393
A H++ L +H + + +W P G K NVDAS S++
Sbjct: 199 ANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRWRKPKSGRLKCNVDASFSTSSNKVG 258
Query: 392 IGMVIRDHRGSFIHGRTLRFAGRVEVLEAEMVGIAEALKWTADYSGQSFCIESDSLLSVQ 213
IGM IRD G+ + +T+ F+ V E +G+ A +W + + E DS
Sbjct: 259 IGMCIRDSEGNHVRSKTMWFSPLCPVNIGEALGLYHATRWINELQLTNVDFEVDSKTIAD 318
Query: 212 AIKGEHQNLLEVGVL----IDYCRTLISSRLNVSLCFVKKQANRVAHLLARLPCTLNSFS 45
+ E G + I +C ++ N + F ++QAN VAH LA+ SF
Sbjct: 319 YFNKARGDNTEFGSIMENTIQFCNIFLT---NSHVEFTRRQANEVAHELAKAATLGPSFH 375
Query: 44 DYSSPPLSVLETL 6
+ P + + +
Sbjct: 376 IFDESPTCISDLI 388