BLASTX nr result

ID: Cnidium21_contig00023667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023667
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189656.1| RRP6-like protein 3 [Arabidopsis thaliana] g...   192   4e-47
ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana] gi|3...   192   4e-47
gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]             192   4e-47
gb|AAY82265.1| hypothetical protein At2g32420 [Arabidopsis thali...   192   4e-47
emb|CBI28799.3| unnamed protein product [Vitis vinifera]              187   8e-46

>ref|NP_001189656.1| RRP6-like protein 3 [Arabidopsis thaliana]
           gi|330253589|gb|AEC08683.1| RRP6-like protein 3
           [Arabidopsis thaliana]
          Length = 872

 Score =  192 bits (487), Expect = 4e-47
 Identities = 107/190 (56%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
 Frame = -3

Query: 565 MENKEKMKLAVAVACLAATISVIVATLYXXXXXXXXXXXXS--CYLKTQHKPQHSFKRVF 392
           ME KEK K+ + VA L A ++++  T Y               CYL ++ KPQ  FKRV 
Sbjct: 1   MELKEKAKVVITVASLVA-VTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVL 59

Query: 391 ADNSYSPFKHLNLNLSTSQTPDNYSNLHPYKSEITQLMKSSKLEFLSNVGENTIPEMKDY 212
           ADNSYS FKHL L  ++S + +  SN HPY++EIT L+++ ++EF    GE ++ EM D 
Sbjct: 60  ADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSL-EMSDS 118

Query: 211 YVWVDSEFKLKELAEVLSKESVFAVDTEQHSLHSFLGFTALIQISTQTEDYLVDTIALHD 32
           YVWV++E +LKELAE+L+KE VFAVDTEQHSL SFLGFTALIQIST  ED+LVDTIALHD
Sbjct: 119 YVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHD 178

Query: 31  VMPILRPVFA 2
           VM ILRPVF+
Sbjct: 179 VMSILRPVFS 188


>ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana]
           gi|330253588|gb|AEC08682.1| RRP6-like protein 3
           [Arabidopsis thaliana]
          Length = 891

 Score =  192 bits (487), Expect = 4e-47
 Identities = 107/190 (56%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
 Frame = -3

Query: 565 MENKEKMKLAVAVACLAATISVIVATLYXXXXXXXXXXXXS--CYLKTQHKPQHSFKRVF 392
           ME KEK K+ + VA L A ++++  T Y               CYL ++ KPQ  FKRV 
Sbjct: 1   MELKEKAKVVITVASLVA-VTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVL 59

Query: 391 ADNSYSPFKHLNLNLSTSQTPDNYSNLHPYKSEITQLMKSSKLEFLSNVGENTIPEMKDY 212
           ADNSYS FKHL L  ++S + +  SN HPY++EIT L+++ ++EF    GE ++ EM D 
Sbjct: 60  ADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSL-EMSDS 118

Query: 211 YVWVDSEFKLKELAEVLSKESVFAVDTEQHSLHSFLGFTALIQISTQTEDYLVDTIALHD 32
           YVWV++E +LKELAE+L+KE VFAVDTEQHSL SFLGFTALIQIST  ED+LVDTIALHD
Sbjct: 119 YVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHD 178

Query: 31  VMPILRPVFA 2
           VM ILRPVF+
Sbjct: 179 VMSILRPVFS 188


>gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]
          Length = 892

 Score =  192 bits (487), Expect = 4e-47
 Identities = 107/190 (56%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
 Frame = -3

Query: 565 MENKEKMKLAVAVACLAATISVIVATLYXXXXXXXXXXXXS--CYLKTQHKPQHSFKRVF 392
           ME KEK K+ + VA L A ++++  T Y               CYL ++ KPQ  FKRV 
Sbjct: 1   MELKEKAKVVITVASLVA-VTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVL 59

Query: 391 ADNSYSPFKHLNLNLSTSQTPDNYSNLHPYKSEITQLMKSSKLEFLSNVGENTIPEMKDY 212
           ADNSYS FKHL L  ++S + +  SN HPY++EIT L+++ ++EF    GE ++ EM D 
Sbjct: 60  ADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSL-EMSDS 118

Query: 211 YVWVDSEFKLKELAEVLSKESVFAVDTEQHSLHSFLGFTALIQISTQTEDYLVDTIALHD 32
           YVWV++E +LKELAE+L+KE VFAVDTEQHSL SFLGFTALIQIST  ED+LVDTIALHD
Sbjct: 119 YVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHD 178

Query: 31  VMPILRPVFA 2
           VM ILRPVF+
Sbjct: 179 VMSILRPVFS 188


>gb|AAY82265.1| hypothetical protein At2g32420 [Arabidopsis thaliana]
          Length = 327

 Score =  192 bits (487), Expect = 4e-47
 Identities = 107/190 (56%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
 Frame = -3

Query: 565 MENKEKMKLAVAVACLAATISVIVATLYXXXXXXXXXXXXS--CYLKTQHKPQHSFKRVF 392
           ME KEK K+ + VA L A ++++  T Y               CYL ++ KPQ  FKRV 
Sbjct: 1   MELKEKAKVVITVASLVA-VTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVL 59

Query: 391 ADNSYSPFKHLNLNLSTSQTPDNYSNLHPYKSEITQLMKSSKLEFLSNVGENTIPEMKDY 212
           ADNSYS FKHL L  ++S + +  SN HPY++EIT L+++ ++EF    GE ++ EM D 
Sbjct: 60  ADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSL-EMSDS 118

Query: 211 YVWVDSEFKLKELAEVLSKESVFAVDTEQHSLHSFLGFTALIQISTQTEDYLVDTIALHD 32
           YVWV++E +LKELAE+L+KE VFAVDTEQHSL SFLGFTALIQIST  ED+LVDTIALHD
Sbjct: 119 YVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHD 178

Query: 31  VMPILRPVFA 2
           VM ILRPVF+
Sbjct: 179 VMSILRPVFS 188


>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  187 bits (476), Expect = 8e-46
 Identities = 103/188 (54%), Positives = 133/188 (70%)
 Frame = -3

Query: 565 MENKEKMKLAVAVACLAATISVIVATLYXXXXXXXXXXXXSCYLKTQHKPQHSFKRVFAD 386
           ME+KEK+K+ VA+A  A  +S+     Y             CYL T+ KPQ+SFK V AD
Sbjct: 1   MESKEKIKIVVAIASFAV-LSIFFTAQYRKRRYRKCTQSS-CYLHTEPKPQYSFKLVLAD 58

Query: 385 NSYSPFKHLNLNLSTSQTPDNYSNLHPYKSEITQLMKSSKLEFLSNVGENTIPEMKDYYV 206
           NSYS FKHL L  S S+T     + HPY++EI+ L++++++EF     E+   ++ D YV
Sbjct: 59  NSYSAFKHLKLGESNSETS---LHSHPYEAEISALLENAEIEFSFGT-ESMDLKISDSYV 114

Query: 205 WVDSEFKLKELAEVLSKESVFAVDTEQHSLHSFLGFTALIQISTQTEDYLVDTIALHDVM 26
           WV++E +LKELA+VLSK+ VFAVDTEQHSL SFLGFTALIQISTQ EDYLVDTIALHD +
Sbjct: 115 WVETELQLKELADVLSKQRVFAVDTEQHSLRSFLGFTALIQISTQNEDYLVDTIALHDTL 174

Query: 25  PILRPVFA 2
            +L+PVFA
Sbjct: 175 DVLQPVFA 182


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