BLASTX nr result

ID: Cnidium21_contig00023613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023613
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301894.1| predicted protein [Populus trichocarpa] gi|2...   235   5e-60
ref|XP_003612434.1| Auxin efflux carrier protein [Medicago trunc...   216   3e-54
ref|XP_003612431.1| Auxin efflux carrier protein [Medicago trunc...   216   3e-54
gb|ACJ85428.1| unknown [Medicago truncatula] gi|388497566|gb|AFK...   216   3e-54
ref|XP_002528528.1| auxin:hydrogen symporter, putative [Ricinus ...   215   4e-54

>ref|XP_002301894.1| predicted protein [Populus trichocarpa] gi|222843620|gb|EEE81167.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  235 bits (599), Expect = 5e-60
 Identities = 112/155 (72%), Positives = 136/155 (87%)
 Frame = +2

Query: 2   IVGFIVGVIPWLRKLMIGDTAPLRVIEEDSTILLGEGAIPALSLIIGANLLKGLRATGTQ 181
           IVGF++GVIP  RKLM+G+ APLRVI+ DS  LLG+GAIP L+LI+GANLLKGLR +G Q
Sbjct: 254 IVGFVIGVIPLTRKLMVGNDAPLRVIQ-DSASLLGDGAIPTLNLIMGANLLKGLRGSGIQ 312

Query: 182 KSMVFGIVVARYIALPLAGIVIVKGSMRLNLVQADPLYEFVLLIQYAVPPAMNMGTITQM 361
           KS++FGI+VARYIALPL GI IV+G++R   +  DPLY+F+LL+Q+AVPPAMNMGTITQ+
Sbjct: 313 KSVIFGIIVARYIALPLIGIFIVRGALRFGFIPQDPLYQFILLLQFAVPPAMNMGTITQL 372

Query: 362 FGTGETECSVIMLWTYALASVSLTLWCTFFLWLVA 466
           FG GETECSVI+LW YALAS+SLTLW TFF+WLVA
Sbjct: 373 FGAGETECSVIILWAYALASISLTLWSTFFMWLVA 407


>ref|XP_003612434.1| Auxin efflux carrier protein [Medicago truncatula]
           gi|355513769|gb|AES95392.1| Auxin efflux carrier protein
           [Medicago truncatula]
          Length = 353

 Score =  216 bits (549), Expect = 3e-54
 Identities = 100/155 (64%), Positives = 129/155 (83%)
 Frame = +2

Query: 2   IVGFIVGVIPWLRKLMIGDTAPLRVIEEDSTILLGEGAIPALSLIIGANLLKGLRATGTQ 181
           IVGFIVGV+PWLR+LMIG  APL VIE DS  +LG+ AIP ++LI+GANLL+GL+   T 
Sbjct: 200 IVGFIVGVVPWLRRLMIGSNAPLHVIE-DSASMLGDAAIPTITLIMGANLLRGLKGASTP 258

Query: 182 KSMVFGIVVARYIALPLAGIVIVKGSMRLNLVQADPLYEFVLLIQYAVPPAMNMGTITQM 361
              + GI+V RYI LP+ G++I+KG+  L LVQ DPLY+FVLL+QYA+PPAMN+GTI Q+
Sbjct: 259 FWTIIGIIVVRYILLPIFGVLIIKGATHLGLVQIDPLYQFVLLLQYALPPAMNIGTIAQL 318

Query: 362 FGTGETECSVIMLWTYALASVSLTLWCTFFLWLVA 466
           FG GE+ECSV+MLWTYALAS+++TLW T+F+WLV+
Sbjct: 319 FGAGESECSVMMLWTYALASIAVTLWSTYFMWLVS 353


>ref|XP_003612431.1| Auxin efflux carrier protein [Medicago truncatula]
           gi|355513766|gb|AES95389.1| Auxin efflux carrier protein
           [Medicago truncatula]
          Length = 417

 Score =  216 bits (549), Expect = 3e-54
 Identities = 100/155 (64%), Positives = 129/155 (83%)
 Frame = +2

Query: 2   IVGFIVGVIPWLRKLMIGDTAPLRVIEEDSTILLGEGAIPALSLIIGANLLKGLRATGTQ 181
           IVGFIVGV+PWLR+LMIG  APL VIE DS  +LG+ AIP ++LI+GANLL+GL+   T 
Sbjct: 264 IVGFIVGVVPWLRRLMIGSNAPLHVIE-DSASMLGDAAIPTITLIMGANLLRGLKGASTP 322

Query: 182 KSMVFGIVVARYIALPLAGIVIVKGSMRLNLVQADPLYEFVLLIQYAVPPAMNMGTITQM 361
              + GI+V RYI LP+ G++I+KG+  L LVQ DPLY+FVLL+QYA+PPAMN+GTI Q+
Sbjct: 323 FWTIIGIIVVRYILLPIFGVLIIKGATHLGLVQIDPLYQFVLLLQYALPPAMNIGTIAQL 382

Query: 362 FGTGETECSVIMLWTYALASVSLTLWCTFFLWLVA 466
           FG GE+ECSV+MLWTYALAS+++TLW T+F+WLV+
Sbjct: 383 FGAGESECSVMMLWTYALASIAVTLWSTYFMWLVS 417


>gb|ACJ85428.1| unknown [Medicago truncatula] gi|388497566|gb|AFK36849.1| unknown
           [Medicago truncatula] gi|388517847|gb|AFK46985.1|
           unknown [Medicago truncatula]
          Length = 417

 Score =  216 bits (549), Expect = 3e-54
 Identities = 100/155 (64%), Positives = 129/155 (83%)
 Frame = +2

Query: 2   IVGFIVGVIPWLRKLMIGDTAPLRVIEEDSTILLGEGAIPALSLIIGANLLKGLRATGTQ 181
           IVGFIVGV+PWLR+LMIG  APL VIE DS  +LG+ AIP ++LI+GANLL+GL+   T 
Sbjct: 264 IVGFIVGVVPWLRRLMIGSNAPLHVIE-DSASMLGDAAIPTITLIMGANLLRGLKGASTP 322

Query: 182 KSMVFGIVVARYIALPLAGIVIVKGSMRLNLVQADPLYEFVLLIQYAVPPAMNMGTITQM 361
              + GI+V RYI LP+ G++I+KG+  L LVQ DPLY+FVLL+QYA+PPAMN+GTI Q+
Sbjct: 323 FWTIIGIIVVRYILLPIFGVLIIKGATHLGLVQIDPLYQFVLLLQYALPPAMNIGTIAQL 382

Query: 362 FGTGETECSVIMLWTYALASVSLTLWCTFFLWLVA 466
           FG GE+ECSV+MLWTYALAS+++TLW T+F+WLV+
Sbjct: 383 FGAGESECSVMMLWTYALASIAVTLWSTYFMWLVS 417


>ref|XP_002528528.1| auxin:hydrogen symporter, putative [Ricinus communis]
           gi|223532030|gb|EEF33840.1| auxin:hydrogen symporter,
           putative [Ricinus communis]
          Length = 417

 Score =  215 bits (548), Expect = 4e-54
 Identities = 101/154 (65%), Positives = 131/154 (85%)
 Frame = +2

Query: 2   IVGFIVGVIPWLRKLMIGDTAPLRVIEEDSTILLGEGAIPALSLIIGANLLKGLRATGTQ 181
           IVGFIVG +P +RKL+IG  APL VIE DS  L+G+ AIPA++LI+G NLL+GL+ +G Q
Sbjct: 264 IVGFIVGAVPQIRKLLIGTNAPLHVIE-DSASLVGDAAIPAVTLIVGGNLLRGLKGSGIQ 322

Query: 182 KSMVFGIVVARYIALPLAGIVIVKGSMRLNLVQADPLYEFVLLIQYAVPPAMNMGTITQM 361
            S+VFGI+  RY+ LPL GIVIV+G++   LV +DPLY+F+LL+Q+AVPPAMN+GT+TQ+
Sbjct: 323 LSLVFGILGVRYVILPLLGIVIVRGAVHFGLVGSDPLYQFILLVQFAVPPAMNIGTMTQL 382

Query: 362 FGTGETECSVIMLWTYALASVSLTLWCTFFLWLV 463
           FGTG++ECSVIMLWTYA+AS+SLTLW T FLW+V
Sbjct: 383 FGTGQSECSVIMLWTYAMASISLTLWSTLFLWMV 416


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