BLASTX nr result

ID: Cnidium21_contig00023600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023600
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]                 241   1e-61
tpg|DAA41796.1| TPA: Trafficking protein particle complex protei...   239   4e-61
ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|2...   239   4e-61
ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana] gi|33...   239   4e-61
ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|2...   238   5e-61

>gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]
          Length = 135

 Score =  241 bits (614), Expect = 1e-61
 Identities = 118/135 (87%), Positives = 126/135 (93%)
 Frame = -2

Query: 553 MTSTACFMIVSQNDIPIYEAEVGTAPKTEDAAHEHQFILHAALDIVQDIAWTTSAMFLKS 374
           M +TACFMIV++NDIPIYEAEVG+A K EDAA  HQFILHAALD+VQD+AWTTSAMFLKS
Sbjct: 1   MANTACFMIVARNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 373 IDRFNDLVVSVYVTAGHTHLMLLHDSRNDDGIKSFFQEVHELYIKILQNPLYLPGSRIKS 194
           +DRFNDLVVSVYVTAGHT LMLLHDSRN+DGIKSFFQEVHELYIKIL NPLYLPGSRI S
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 193 PHFDTKVRALARKYL 149
            HFDTKVRALARKYL
Sbjct: 121 THFDTKVRALARKYL 135


>tpg|DAA41796.1| TPA: Trafficking protein particle complex protein 2 [Zea mays]
          Length = 205

 Score =  239 bits (609), Expect = 4e-61
 Identities = 114/138 (82%), Positives = 127/138 (92%)
 Frame = -2

Query: 562 LISMTSTACFMIVSQNDIPIYEAEVGTAPKTEDAAHEHQFILHAALDIVQDIAWTTSAMF 383
           L+ M STACF+IVS+NDIPIYEAEVG+APK ED ++ HQFILHAALD+VQD+AWTT+AMF
Sbjct: 68  LVGMASTACFVIVSKNDIPIYEAEVGSAPKKEDLSYHHQFILHAALDVVQDLAWTTNAMF 127

Query: 382 LKSIDRFNDLVVSVYVTAGHTHLMLLHDSRNDDGIKSFFQEVHELYIKILQNPLYLPGSR 203
           LKS+DRFNDLVVSVYVTAGHT  MLLHDSR++DGIKSFFQEVHELYIKI  NPLYLPGSR
Sbjct: 128 LKSVDRFNDLVVSVYVTAGHTRFMLLHDSRSEDGIKSFFQEVHELYIKIFLNPLYLPGSR 187

Query: 202 IKSPHFDTKVRALARKYL 149
           I S HFDTKVRALAR+YL
Sbjct: 188 ITSSHFDTKVRALARRYL 205


>ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|222831939|gb|EEE70416.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  239 bits (609), Expect = 4e-61
 Identities = 118/135 (87%), Positives = 126/135 (93%)
 Frame = -2

Query: 553 MTSTACFMIVSQNDIPIYEAEVGTAPKTEDAAHEHQFILHAALDIVQDIAWTTSAMFLKS 374
           M +TACF+IVS++DIPIYEAEVG+A K EDAA  HQFILHAALDIVQD+AWTTSAM+LK+
Sbjct: 1   MATTACFIIVSRDDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 373 IDRFNDLVVSVYVTAGHTHLMLLHDSRNDDGIKSFFQEVHELYIKILQNPLYLPGSRIKS 194
           IDRFNDLVVSVYVTAGHT LMLLHDSRNDDGIKSFFQEVHELYIKIL NPLYLPGSRI S
Sbjct: 61  IDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRIAS 120

Query: 193 PHFDTKVRALARKYL 149
            HFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135


>ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana]
           gi|332198292|gb|AEE36413.1| SNARE-like protein
           [Arabidopsis thaliana]
          Length = 135

 Score =  239 bits (609), Expect = 4e-61
 Identities = 117/135 (86%), Positives = 125/135 (92%)
 Frame = -2

Query: 553 MTSTACFMIVSQNDIPIYEAEVGTAPKTEDAAHEHQFILHAALDIVQDIAWTTSAMFLKS 374
           M +TACF+IV +NDIPIYEAEVG+A K EDAA  HQFILHAALD+VQD+AWTTSAMFLKS
Sbjct: 1   MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 373 IDRFNDLVVSVYVTAGHTHLMLLHDSRNDDGIKSFFQEVHELYIKILQNPLYLPGSRIKS 194
           +DRFNDLVVSVYVTAGHT LMLLHDSRN+DGIKSFFQEVHELYIKIL NPLYLPGSRI S
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 193 PHFDTKVRALARKYL 149
            HFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135


>ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|222842163|gb|EEE79710.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  238 bits (608), Expect = 5e-61
 Identities = 117/135 (86%), Positives = 125/135 (92%)
 Frame = -2

Query: 553 MTSTACFMIVSQNDIPIYEAEVGTAPKTEDAAHEHQFILHAALDIVQDIAWTTSAMFLKS 374
           M +TACF+IVS+NDIPIYEAEVG+A K EDAA  HQFILHAALDIVQD+AWTTSAM+LK+
Sbjct: 1   MATTACFIIVSRNDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 373 IDRFNDLVVSVYVTAGHTHLMLLHDSRNDDGIKSFFQEVHELYIKILQNPLYLPGSRIKS 194
           IDRFND+VVSVYVTAGHT  MLLHDSRNDDGIKSFFQEVHELYIKIL NPLYLPGSRI S
Sbjct: 61  IDRFNDMVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 193 PHFDTKVRALARKYL 149
            HFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135


Top