BLASTX nr result
ID: Cnidium21_contig00023593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00023593
(1234 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti... 468 e-129
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2... 436 e-120
ref|XP_002307489.1| f-box family protein [Populus trichocarpa] g... 428 e-117
ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thalia... 422 e-116
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub... 422 e-115
>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
Length = 374
Score = 468 bits (1204), Expect = e-129
Identities = 237/371 (63%), Positives = 274/371 (73%), Gaps = 16/371 (4%)
Frame = +3
Query: 24 PFYQLSQDTIQQIFSLLPLRQIIISKSVSKFFNQTXXXXXXXXXXXXXXXXAXXXXXXXX 203
P Y+L QDT+ IFS LPLRQIII +SV KFF QT
Sbjct: 5 PIYRLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELISTQPPLNLIALRPPH 64
Query: 204 XXXXXXX-----------TLHAFDPNLNQWLRFPLNFLPFSAHQPVASSLGLIYLWADTN 350
LH FDP+ NQW+RFPL+FLPF + PVASSLGL+YLWAD+
Sbjct: 65 HHHHHHHHHHNRDVSSHNALHVFDPSSNQWVRFPLSFLPFRSPTPVASSLGLVYLWADSL 124
Query: 351 ---ESTKSLLVCNPLSRCYKILPQLGSAWSRHGSVLVGSPNRVLVLTELAALYYSGGSDN 521
ES KSL+VCNPL+R +++LPQLGSAWSRHGSVLVGSPNRVLVLTELA LY+SG SD
Sbjct: 125 NSLESNKSLIVCNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSG-SDQ 183
Query: 522 WLKFSSNLPSKPRSPVLIKDSIIALCDVGSPWRAQWKLFTITLQSLQCRSQWTCLEKLEW 701
WLKFSSNLPSKPRSP+L+ DS++ALCDVGSPWR+QWKLF TL LQ WT L++ EW
Sbjct: 184 WLKFSSNLPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 243
Query: 702 GDVFDILKRPRLVKGNGNRILMIGGLKSSFLLNSSCTTILILRLDLETLEWDEAGRMPIE 881
GDVFDIL+RPRLVKG GN+ILM+GGLKSSF LN+ C+TILILRLDL++LEWDE GRMP E
Sbjct: 244 GDVFDILRRPRLVKGLGNQILMVGGLKSSFSLNAVCSTILILRLDLDSLEWDELGRMPPE 303
Query: 882 MFTCFQESSKFKVFGGGDRVCFSAKRIGKLALWDNS--KGKAEWKWIESVPWNGDGVCRG 1055
MF CFQESSKFKVFG G+RVCFSAKR+G+LALWD S GK +W+WI VP NGDG+ RG
Sbjct: 304 MFRCFQESSKFKVFGAGNRVCFSAKRVGRLALWDYSTETGKGDWRWINGVPGNGDGLFRG 363
Query: 1056 FLFEAGYMASP 1088
F+F+A A P
Sbjct: 364 FVFQARLTALP 374
>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
predicted protein [Populus trichocarpa]
Length = 376
Score = 436 bits (1121), Expect = e-120
Identities = 224/373 (60%), Positives = 268/373 (71%), Gaps = 18/373 (4%)
Frame = +3
Query: 24 PFYQLSQDTIQQIFSLLPLRQIIISKSVSKFFNQTXXXXXXXXXXXXXXXXAXXXXXXXX 203
P +L QDT+ QIFS LPLRQI+I +SV KFFNQ
Sbjct: 5 PINRLPQDTLHQIFSSLPLRQIMICRSVCKFFNQMLTSPSFVDLISTQPPLRFLALRPPH 64
Query: 204 XXXXXXXT-----------LHAFDPNLNQWLRFPLNFLPFSAHQPVASSLGLIYLWADTN 350
LH FDP+ NQWLRF L+FLPF + PVAS+ GLIYLW ++
Sbjct: 65 HHHHLHHQRQNSHVSSVPYLHVFDPDQNQWLRFSLSFLPFRSPHPVASASGLIYLWGESP 124
Query: 351 ---ESTKSLLVCNPLSRCYKILPQLGSAWSRHGSVLVGSPN-RVLVLTELAALYYSGGS- 515
ES +SL+VCNPL+R +++LPQLGSAWSRHGSVLV S N RV+VLTELAALY+S +
Sbjct: 125 TSIESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSNTNK 184
Query: 516 -DNWLKFSSNLPSKPRSPVLIKDSIIALCDVGSPWRAQWKLFTITLQSLQCR-SQWTCLE 689
++WL FS+NLPSKPRSP+LI DS+ ALCDVGSPWR+QWKLFT L L + W CLE
Sbjct: 185 TNSWLTFSANLPSKPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNNNYNNWVCLE 244
Query: 690 KLEWGDVFDILKRPRLVKGNGNRILMIGGLKSSFLLNSSCTTILILRLDLETLEWDEAGR 869
+ EWGD+FDI+KRPRLV+G GN++LMIGGLKS+F LN+SC+TILILRLDLE LEW+EAGR
Sbjct: 245 RQEWGDIFDIIKRPRLVRGKGNKLLMIGGLKSNFSLNTSCSTILILRLDLERLEWEEAGR 304
Query: 870 MPIEMFTCFQESSKFKVFGGGDRVCFSAKRIGKLALWDNSKGKAEWKWIESVPWNGDGVC 1049
MP++M+ FQESSK KVFGGGDRVCFSAKR+ KLALWD+ G W+WIE VP GDG+C
Sbjct: 305 MPVDMYRSFQESSKLKVFGGGDRVCFSAKRMRKLALWDDCDG-VVWRWIEGVPVGGDGLC 363
Query: 1050 RGFLFEAGYMASP 1088
RGF+FEAG A P
Sbjct: 364 RGFVFEAGRTALP 376
>ref|XP_002307489.1| f-box family protein [Populus trichocarpa]
gi|222856938|gb|EEE94485.1| f-box family protein [Populus
trichocarpa]
Length = 374
Score = 428 bits (1100), Expect = e-117
Identities = 220/369 (59%), Positives = 265/369 (71%), Gaps = 16/369 (4%)
Frame = +3
Query: 24 PFYQLSQDTIQQIFSLLPLRQIIISKSVSKFFNQTXXXXXXXXXXXXXXXXAXXXXXXXX 203
P +L QDT+ QIFS LPLRQI+I +SV KFFNQ
Sbjct: 5 PINRLPQDTLNQIFSSLPLRQIMICRSVCKFFNQMLTSPSFMDLISTQTPLRFLALRPPH 64
Query: 204 XXXXXXXT---------LHAFDPNLNQWLRFPLNFLPFSAHQPVASSLGLIYLWADTN-- 350
LH FDP+ NQWLRF L+FLPF + QPVAS+ GL+YLW ++
Sbjct: 65 HHHHHQRHNSHVSSLPYLHVFDPDQNQWLRFSLSFLPFRSPQPVASASGLLYLWGESPNS 124
Query: 351 -ESTKSLLVCNPLSRCYKILPQLGSAWSRHGSVLVGSPN-RVLVLTELAALYYSGGS--D 518
ES +SL+VCNPL+R +++LPQLGSAWSRHGSVLV S N RV+VLTELAALY+S + +
Sbjct: 125 LESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSNTNKTN 184
Query: 519 NWLKFSSNLPSKPRSPVLIKDSIIALCDVGSPWRAQWKLFTITLQSLQ-CRSQWTCLEKL 695
+WL FS+NLPSKPRSP+LI DS+ ALCDVGS WR+QWKLFT TL +L + W CL +L
Sbjct: 185 SWLTFSANLPSKPRSPILISDSVFALCDVGSRWRSQWKLFTCTLTNLNNSYNNWVCLGRL 244
Query: 696 EWGDVFDILKRPRLVKGNGNRILMIGGLKSSFLLNSSCTTILILRLDLETLEWDEAGRMP 875
EWGD+FDI+KRPRLV+G GN++LMIG LKS+F LN SC+TILILRLDL +EW+EAGRMP
Sbjct: 245 EWGDIFDIIKRPRLVRGKGNKLLMIGVLKSNFSLNPSCSTILILRLDLARMEWEEAGRMP 304
Query: 876 IEMFTCFQESSKFKVFGGGDRVCFSAKRIGKLALWDNSKGKAEWKWIESVPWNGDGVCRG 1055
EM+ FQESSKFK+FGGGDRVC SAKR+GKLALWD+ G W+WIE VP GDG+CRG
Sbjct: 305 SEMYKSFQESSKFKIFGGGDRVCLSAKRVGKLALWDDCDG-VVWRWIEGVPGGGDGLCRG 363
Query: 1056 FLFEAGYMA 1082
F+FEA A
Sbjct: 364 FVFEASLTA 372
>ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thaliana]
gi|75098682|sp|O49279.1|SKI15_ARATH RecName:
Full=SKP1-interacting partner 15; AltName: Full=F-box
only protein 3 gi|2829924|gb|AAC00632.1| Unknown protein
[Arabidopsis thaliana] gi|17473630|gb|AAL38278.1| unknown
protein [Arabidopsis thaliana] gi|21553606|gb|AAM62699.1|
F-box protein AtFBX3 [Arabidopsis thaliana]
gi|30725584|gb|AAP37814.1| At1g76920 [Arabidopsis
thaliana] gi|332197782|gb|AEE35903.1| SKP1-interacting
partner 15 [Arabidopsis thaliana]
Length = 374
Score = 422 bits (1085), Expect = e-116
Identities = 219/375 (58%), Positives = 266/375 (70%), Gaps = 18/375 (4%)
Frame = +3
Query: 18 SPPFYQLSQDTIQQIFSLLPLRQIIISKSVSKFFNQTXXXXXXXXXXXXXXXXAXXXXXX 197
S P L D++ QIFS LP+R I+I +SV KFFNQ
Sbjct: 3 SSPVNCLPPDSLHQIFSSLPIRDIMICRSVCKFFNQLLTSQCFIEIISTRPPLNLLALRP 62
Query: 198 XXXXXXXXXT-----------LHAFDPNLNQWLRFPLNFLPFSAHQPVASSLGLIYLWAD 344
+ +H +DP NQW RF L+FLPF + QPVASS GLIYLW D
Sbjct: 63 PHHHHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYLWGD 122
Query: 345 T---NESTKSLLVCNPLSRCYKILPQLGSAWSRHGSVLVGSPNRVLVLTELAALYYSGG- 512
+ ES+KSL+ CNPL+R +K+LPQLGSAWSRHG+VLV S NRV+VLTELAALYYSG
Sbjct: 123 SIDLAESSKSLVACNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGTV 182
Query: 513 -SDNWLKFSSNLPSKPRSPVLIKDSIIALCDVGSPWRAQWKLFTITLQSLQC-RSQWTCL 686
++ WLKFSSNLPSKPRSPVL+ S+ ALCDVGSPWR+QWKLF+ L +L + W CL
Sbjct: 183 VANQWLKFSSNLPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCL 242
Query: 687 EKLEWGDVFDILKRPRLVKGNGN-RILMIGGLKSSFLLNSSCTTILILRLDLETLEWDEA 863
EK EWGD+FDI+KRPRL++GNG+ ++LMIGGLKS+F LN +C+TILILRLDLE+LEW+EA
Sbjct: 243 EKHEWGDIFDIIKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEWEEA 302
Query: 864 GRMPIEMFTCFQESSKFKVFGGGDRVCFSAKRIGKLALWDNSKGKAEWKWIESVPWNGDG 1043
GRMP+EM+ FQESSKFKVFGGGDRV FSAKR+GKLA+WD +G W+WIE VP DG
Sbjct: 303 GRMPLEMYRGFQESSKFKVFGGGDRVYFSAKRMGKLAMWDCWQG---WRWIEGVPGYADG 359
Query: 1044 VCRGFLFEAGYMASP 1088
+CRGF+F+A P
Sbjct: 360 LCRGFVFDAKLTLMP 374
>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333503|gb|EFH63921.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 422 bits (1084), Expect = e-115
Identities = 217/375 (57%), Positives = 266/375 (70%), Gaps = 18/375 (4%)
Frame = +3
Query: 18 SPPFYQLSQDTIQQIFSLLPLRQIIISKSVSKFFNQTXXXXXXXXXXXXXXXXAXXXXXX 197
S P +L D++ QIFS LPLR I++ +SV KFFNQ
Sbjct: 3 SSPINRLPPDSLHQIFSSLPLRDIMVCRSVCKFFNQLLTSQCFIEIISTRPPLNLLALRP 62
Query: 198 XXXXXXXXXT-----------LHAFDPNLNQWLRFPLNFLPFSAHQPVASSLGLIYLWAD 344
+ +H +DP NQW RF L+FLPF + QPVASS GLIYLW D
Sbjct: 63 PHHHHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYLWGD 122
Query: 345 T---NESTKSLLVCNPLSRCYKILPQLGSAWSRHGSVLVGSPNRVLVLTELAALYYSGG- 512
+ ES+KSL+ CNPL+R +K+LPQLGSAWSRHG+VLV S NRV+VLTELAALYYSG
Sbjct: 123 SIDLAESSKSLVACNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGTV 182
Query: 513 -SDNWLKFSSNLPSKPRSPVLIKDSIIALCDVGSPWRAQWKLFTITLQSLQC-RSQWTCL 686
++ W KFSSNLPSKPRSPVL+ S+ ALCDVGSPWR+QWKLF+ L +L + W CL
Sbjct: 183 VANQWFKFSSNLPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCL 242
Query: 687 EKLEWGDVFDILKRPRLVKGNGN-RILMIGGLKSSFLLNSSCTTILILRLDLETLEWDEA 863
EK EWGD+FDI+KRPRL++GNG+ ++LMIGGLKS+F LN +C+TILILRLDLE+LEW+EA
Sbjct: 243 EKHEWGDIFDIIKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEWEEA 302
Query: 864 GRMPIEMFTCFQESSKFKVFGGGDRVCFSAKRIGKLALWDNSKGKAEWKWIESVPWNGDG 1043
GRMP+EM+ FQESSKFKVFGGGDRV FSAKR+GKLA+WD +G W+WI+ VP DG
Sbjct: 303 GRMPLEMYRGFQESSKFKVFGGGDRVYFSAKRMGKLAMWDCWEG---WRWIDGVPGYADG 359
Query: 1044 VCRGFLFEAGYMASP 1088
+CRGF+F+A P
Sbjct: 360 LCRGFVFDAKLTMMP 374