BLASTX nr result

ID: Cnidium21_contig00023582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023582
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14936.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002511307.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>emb|CBI14936.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 17/109 (15%)
 Frame = -1

Query: 277 PAPNPTRLLSPPKHLTEXXXXXXXXXSTCVLPEKQGHSPA---VESGHRRSISSYS---D 116
           PA   T LLSPPK+L E         STC LPE    SP    VES HRRSISS +   D
Sbjct: 75  PAAPDTHLLSPPKNLIESARRRSISSSTCSLPENPVLSPPRNLVESAHRRSISSSTCSID 134

Query: 115 QNSIEL-----------VKDLNGFLKEQRVKIKKLISGEIDGTAKIVLS 2
           + S ++            +++N FLKEQR KI K+++GEI   AKI+LS
Sbjct: 135 KLSSKVNSAGGHRGGDEARNINEFLKEQRTKIGKIVNGEISAKAKILLS 183


>ref|XP_002511307.1| conserved hypothetical protein [Ricinus communis]
           gi|223550422|gb|EEF51909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 648

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
 Frame = -1

Query: 298 PPTKRVNPAPNP-TRLLSPPKHLTEXXXXXXXXXSTCVLPEKQGHSPA--VESGHRRSIS 128
           P  +   PAP P T+LLSPPK+L E         +   L ++    P   VES HRRSI+
Sbjct: 241 PSRRTFKPAPVPDTQLLSPPKNLIESAHRRSISSTYAQLEDQPLSPPRNLVESAHRRSIT 300

Query: 127 SYS--------------------DQNSIELVKDLNGFLKEQRVKIKKLISGEIDGTAKIV 8
             +                    ++   E    LNGFLKEQR KI+K+++GEI   AK++
Sbjct: 301 RSTCSINERIPPKPNVLISGRQKEEYKGERGISLNGFLKEQRTKIEKILNGEIGSKAKVI 360

Query: 7   LS 2
           LS
Sbjct: 361 LS 362


>ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|222868633|gb|EEF05764.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 46/125 (36%), Positives = 59/125 (47%), Gaps = 24/125 (19%)
 Frame = -1

Query: 304 PQPPTKRVNPAP---NPTRLLSPPKHLTEXXXXXXXXXSTCVLPEKQGHSPA---VESGH 143
           P    +   PAP       LLSPPK+L E         + C  PE Q  SP    +ES H
Sbjct: 247 PATSRRTFKPAPILRQDIHLLSPPKNLIESAQRRSISSNKCSKPETQPLSPPKNLMESSH 306

Query: 142 RRSISSYSDQNSIELVK------------------DLNGFLKEQRVKIKKLISGEIDGTA 17
           RRSIS  +   SIE V                    LNGFL E++ KI+K+++ E+D  A
Sbjct: 307 RRSISKSTC--SIEKVAPKPLVSGCKKEEEGEEDFSLNGFLIEEKTKIEKILNRELDSKA 364

Query: 16  KIVLS 2
           KI+LS
Sbjct: 365 KIILS 369


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