BLASTX nr result
ID: Cnidium21_contig00023575
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00023575 (661 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI41034.3| unnamed protein product [Vitis vinifera] 240 2e-61 ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma... 240 2e-61 ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma... 239 4e-61 emb|CBI35709.3| unnamed protein product [Vitis vinifera] 237 1e-60 ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ... 216 4e-54 >emb|CBI41034.3| unnamed protein product [Vitis vinifera] Length = 264 Score = 240 bits (612), Expect = 2e-61 Identities = 110/145 (75%), Positives = 130/145 (89%) Frame = -1 Query: 661 SELKCDESEDDGALATVLEVLKRVHSIFFDTEQGADITKKDVRQVLKTVRKEVLKGCKLI 482 SELK DESE DGALATVL+VL+R+HS+FFD E G D + +DVRQV+K VRKEVLKGCK++ Sbjct: 118 SELKSDESEPDGALATVLKVLQRIHSMFFDPELGDDFSGRDVRQVVKRVRKEVLKGCKIV 177 Query: 481 FTRVFPAKFDAESHHLWKMAEQLGATCSTEMDPSVTHVVSMDKGTEKSRWAVRENKFLVH 302 F+RVFP +F AE+HHLW+MAEQLGATC+TE+DPSVTHVVS D GTEKSRWA++E KFLVH Sbjct: 178 FSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVH 237 Query: 301 PGWIEAANYLWRKQPEENFPVDEVK 227 PGWIEAANY W+KQPEENFPV++ K Sbjct: 238 PGWIEAANYFWQKQPEENFPVNQKK 262 >ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4-like [Vitis vinifera] Length = 278 Score = 240 bits (612), Expect = 2e-61 Identities = 110/145 (75%), Positives = 130/145 (89%) Frame = -1 Query: 661 SELKCDESEDDGALATVLEVLKRVHSIFFDTEQGADITKKDVRQVLKTVRKEVLKGCKLI 482 SELK DESE DGALATVL+VL+R+HS+FFD E G D + +DVRQV+K VRKEVLKGCK++ Sbjct: 132 SELKSDESEPDGALATVLKVLQRIHSMFFDPELGDDFSGRDVRQVVKRVRKEVLKGCKIV 191 Query: 481 FTRVFPAKFDAESHHLWKMAEQLGATCSTEMDPSVTHVVSMDKGTEKSRWAVRENKFLVH 302 F+RVFP +F AE+HHLW+MAEQLGATC+TE+DPSVTHVVS D GTEKSRWA++E KFLVH Sbjct: 192 FSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVH 251 Query: 301 PGWIEAANYLWRKQPEENFPVDEVK 227 PGWIEAANY W+KQPEENFPV++ K Sbjct: 252 PGWIEAANYFWQKQPEENFPVNQKK 276 >ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4-like [Vitis vinifera] Length = 278 Score = 239 bits (609), Expect = 4e-61 Identities = 109/145 (75%), Positives = 130/145 (89%) Frame = -1 Query: 661 SELKCDESEDDGALATVLEVLKRVHSIFFDTEQGADITKKDVRQVLKTVRKEVLKGCKLI 482 SELK DESE DGALATVL+VL+R+HS+FFD E G D + +DVRQV+K VRK+VLKGCK++ Sbjct: 132 SELKSDESEPDGALATVLKVLQRIHSMFFDPELGDDFSGRDVRQVVKRVRKDVLKGCKIV 191 Query: 481 FTRVFPAKFDAESHHLWKMAEQLGATCSTEMDPSVTHVVSMDKGTEKSRWAVRENKFLVH 302 F+RVFP +F AE+HHLW+MAEQLGATC+TE+DPSVTHVVS D GTEKSRWA++E KFLVH Sbjct: 192 FSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVH 251 Query: 301 PGWIEAANYLWRKQPEENFPVDEVK 227 PGWIEAANY W+KQPEENFPV++ K Sbjct: 252 PGWIEAANYFWQKQPEENFPVNQKK 276 >emb|CBI35709.3| unnamed protein product [Vitis vinifera] Length = 638 Score = 237 bits (605), Expect = 1e-60 Identities = 109/146 (74%), Positives = 129/146 (88%) Frame = -1 Query: 661 SELKCDESEDDGALATVLEVLKRVHSIFFDTEQGADITKKDVRQVLKTVRKEVLKGCKLI 482 SELK DESE DGALATVL+VL+R+HS+FFD E G D + +DVRQV+K VRK+VLKGCK++ Sbjct: 118 SELKSDESEPDGALATVLKVLQRIHSMFFDPELGDDFSGRDVRQVVKRVRKDVLKGCKIV 177 Query: 481 FTRVFPAKFDAESHHLWKMAEQLGATCSTEMDPSVTHVVSMDKGTEKSRWAVRENKFLVH 302 F+RVFP +F AE+HHLW+MAEQLGATC+TE+DPSVTHVVS D GTEKSRWA++E KFLVH Sbjct: 178 FSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVH 237 Query: 301 PGWIEAANYLWRKQPEENFPVDEVKQ 224 PGWIEAANY W+KQPEENFPV V + Sbjct: 238 PGWIEAANYFWQKQPEENFPVAAVPE 263 >ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis] gi|223534449|gb|EEF36151.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis] Length = 478 Score = 216 bits (549), Expect = 4e-54 Identities = 100/145 (68%), Positives = 125/145 (86%) Frame = -1 Query: 661 SELKCDESEDDGALATVLEVLKRVHSIFFDTEQGADITKKDVRQVLKTVRKEVLKGCKLI 482 S+LK DE+E DGALA+VL+VL+R+H IFFD + A I +DVRQVL TVRK+VLKGCK++ Sbjct: 331 SQLKSDENESDGALASVLKVLRRIHHIFFDELEDA-IDGRDVRQVLSTVRKDVLKGCKIV 389 Query: 481 FTRVFPAKFDAESHHLWKMAEQLGATCSTEMDPSVTHVVSMDKGTEKSRWAVRENKFLVH 302 F+RVFP +F A++HHLWKMAEQLGATCS E+DPSVTHVVS + GTEKSRWA++ +KFLVH Sbjct: 390 FSRVFPTQFQADNHHLWKMAEQLGATCSREVDPSVTHVVSAEAGTEKSRWALKNDKFLVH 449 Query: 301 PGWIEAANYLWRKQPEENFPVDEVK 227 P WIEA NY+W++QPEENF V++ K Sbjct: 450 PRWIEATNYMWQRQPEENFSVNQPK 474