BLASTX nr result

ID: Cnidium21_contig00023558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023558
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163102.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   112   4e-23
ref|XP_004143610.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   112   4e-23
ref|XP_002513114.1| conserved hypothetical protein [Ricinus comm...   109   3e-22
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   109   4e-22
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   108   5e-22

>ref|XP_004163102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
           sativus]
          Length = 542

 Score =  112 bits (280), Expect = 4e-23
 Identities = 52/69 (75%), Positives = 62/69 (89%)
 Frame = -3

Query: 572 KPVRFSHELMLSRELLVTSATEGRKYELVSTITHHGKEASKGHYTADARYPSGQWLRFDD 393
           KPV F  EL+L+R+LLV+S+TEGRKYELV+TITHHG+E+SKGHYTAD RY + QWLRFDD
Sbjct: 459 KPVHFPLELVLNRDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFDD 518

Query: 392 ASVTAIGSS 366
           ASVTAIG +
Sbjct: 519 ASVTAIGKN 527


>ref|XP_004143610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
           sativus]
          Length = 522

 Score =  112 bits (280), Expect = 4e-23
 Identities = 52/69 (75%), Positives = 62/69 (89%)
 Frame = -3

Query: 572 KPVRFSHELMLSRELLVTSATEGRKYELVSTITHHGKEASKGHYTADARYPSGQWLRFDD 393
           KPV F  EL+L+R+LLV+S+TEGRKYELV+TITHHG+E+SKGHYTAD RY + QWLRFDD
Sbjct: 439 KPVHFPLELVLNRDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFDD 498

Query: 392 ASVTAIGSS 366
           ASVTAIG +
Sbjct: 499 ASVTAIGKN 507


>ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
           gi|223548125|gb|EEF49617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 605

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = -3

Query: 572 KPVRFSHELMLSRELLVTSATEGRKYELVSTITHHGKEASKGHYTADARYPSGQWLRFDD 393
           KPV F  EL+L RELLV+ +TE RKYELV+TITHHG+E SKGHYTADAR P+G WL FDD
Sbjct: 522 KPVHFPLELVLGRELLVSPSTESRKYELVATITHHGREPSKGHYTADARCPNGHWLHFDD 581

Query: 392 ASVTAIGSS 366
           ASVTAIG+S
Sbjct: 582 ASVTAIGTS 590


>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 532

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/69 (73%), Positives = 60/69 (86%)
 Frame = -3

Query: 572 KPVRFSHELMLSRELLVTSATEGRKYELVSTITHHGKEASKGHYTADARYPSGQWLRFDD 393
           KPV F  EL+L RELLV+ +TEGRKYELV+TITHHG E SKGHYTADA+YP+G+WLRFDD
Sbjct: 449 KPVHFPLELVLGRELLVSPSTEGRKYELVATITHHGTEPSKGHYTADAQYPNGRWLRFDD 508

Query: 392 ASVTAIGSS 366
            SV AIG++
Sbjct: 509 QSVFAIGTN 517


>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 532

 Score =  108 bits (271), Expect = 5e-22
 Identities = 50/69 (72%), Positives = 61/69 (88%)
 Frame = -3

Query: 572 KPVRFSHELMLSRELLVTSATEGRKYELVSTITHHGKEASKGHYTADARYPSGQWLRFDD 393
           KPV F  EL+L R+LLV+ +TEGRKYELV+TITHHG+E SKGHYTADA+YP+G+WLRFDD
Sbjct: 449 KPVHFPLELVLGRDLLVSPSTEGRKYELVATITHHGREPSKGHYTADAQYPNGRWLRFDD 508

Query: 392 ASVTAIGSS 366
           ASV AI ++
Sbjct: 509 ASVFAIATN 517


Top