BLASTX nr result

ID: Cnidium21_contig00023543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023543
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig...   200   3e-49
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]   199   7e-49
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu...   180   4e-43
ref|XP_003547380.1| PREDICTED: uncharacterized protein LOC100782...   176   5e-42
ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41

>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1339

 Score =  200 bits (509), Expect = 3e-49
 Identities = 127/280 (45%), Positives = 157/280 (56%), Gaps = 16/280 (5%)
 Frame = -1

Query: 878 FFEFSEQSIISNLYWGIESIEAAIQAKNNAEEKIIRLKNAEKMLQVPALLGEHGVTAEIP 699
           FFEFSE S+ISNLYWGIES+EAAI+AK   EEK  RLKN+E+MLQVPALL E G T  I 
Sbjct: 64  FFEFSEHSVISNLYWGIESVEAAIRAKW-PEEKTSRLKNSEQMLQVPALLDEQGTTGGIS 122

Query: 698 NXXXXXXXXXXXXXVRKLQNDEWQVAIHFLQALMVSPMLVFKEFAPKLCTNIFESCIVSE 519
           N             VRKLQ DEWQVA+HFLQALMVSP L+  EFAP LC N+F +  +SE
Sbjct: 123 NRYIVCCSYFYLSIVRKLQRDEWQVALHFLQALMVSPRLIQTEFAPGLCENLFLTHSISE 182

Query: 518 RQREVNARRKSGVLSHFNSGEGEVGEGLRLIAKKYKGWLMYYQVMFYGXXXXXXXXXXXX 339
           RQ       +S  +S  NS EG+ GE +R  AK+YK WLMYYQVM YG            
Sbjct: 183 RQNVGGRSFRS--VSLMNSDEGKPGEAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDI 240

Query: 338 XXXDKS---ENLLNMKSNTESSHSPERECSQQQAYSSFEKVHPLDPLEY-------XXXX 189
                     ++    S+T+SS S     +  Q Y +F+KVHPLDP E            
Sbjct: 241 LSPVDQSPYNSMYGKSSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKA 300

Query: 188 XXXXXXXSTYLRNLLVDDR------SKTTDIRCLRDILKE 87
                    Y + L   D+       ++++I+CL+DIL E
Sbjct: 301 SRDNTEIQDYRKALNNSDQVSRQDIKRSSNIKCLQDILME 340


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score =  199 bits (506), Expect = 7e-49
 Identities = 127/280 (45%), Positives = 156/280 (55%), Gaps = 16/280 (5%)
 Frame = -1

Query: 878 FFEFSEQSIISNLYWGIESIEAAIQAKNNAEEKIIRLKNAEKMLQVPALLGEHGVTAEIP 699
           FFEFSE S+ISNLYWGIES+EAAI+AK   EEK  RLKN+E+MLQVPALL E G T  I 
Sbjct: 64  FFEFSEHSVISNLYWGIESVEAAIRAKW-PEEKTSRLKNSEQMLQVPALLDEQGTTGGIS 122

Query: 698 NXXXXXXXXXXXXXVRKLQNDEWQVAIHFLQALMVSPMLVFKEFAPKLCTNIFESCIVSE 519
           N             VRKLQ DEWQVA+HFLQALMVSP L+  EFAP LC N+F +  +SE
Sbjct: 123 NRYIVCCSYFYLSIVRKLQRDEWQVALHFLQALMVSPRLIQTEFAPGLCENLFLTHSISE 182

Query: 518 RQREVNARRKSGVLSHFNSGEGEVGEGLRLIAKKYKGWLMYYQVMFYGXXXXXXXXXXXX 339
           RQ       +S  +S  NS EG+ GE +R  AK+YK WLMYYQVM YG            
Sbjct: 183 RQNVGGRSFRS--VSLMNSDEGKPGEAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDI 240

Query: 338 XXXDKS---ENLLNMKSNTESSHSPERECSQQQAYSSFEKVHPLDPLEY-------XXXX 189
                     +     S+T+SS S     +  Q Y +F+KVHPLDP E            
Sbjct: 241 LSPVDQSPYNSXYGKSSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKA 300

Query: 188 XXXXXXXSTYLRNLLVDDR------SKTTDIRCLRDILKE 87
                    Y + L   D+       ++++I+CL+DIL E
Sbjct: 301 SRDNTEIQDYRKALNNSDQVSRQDIKRSSNIKCLQDILME 340


>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223544025|gb|EEF45551.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1357

 Score =  180 bits (456), Expect = 4e-43
 Identities = 105/227 (46%), Positives = 137/227 (60%), Gaps = 1/227 (0%)
 Frame = -1

Query: 878 FFEFSEQSIISNLYWGIESIEAAIQAKNNAEEKIIRLKNAEKMLQVPALLGEHGVTAEIP 699
           FFEFSE S++SNLYWGIES+EAA++AK   EEK  RLK++E+MLQ PALL EHGVTA I 
Sbjct: 63  FFEFSEHSVVSNLYWGIESVEAAVRAKC-VEEKANRLKSSERMLQAPALLDEHGVTAGIQ 121

Query: 698 NXXXXXXXXXXXXXVRKLQNDEWQVAIHFLQALMVSPMLVFKEFAPKLCTNIFESCIVSE 519
           N             +RKLQNDEWQVA+HFLQA++VSP  V  E AP+ C ++F    V E
Sbjct: 122 NHYLVCCSYFYLSMIRKLQNDEWQVALHFLQAMLVSPRFVRAELAPEFCASLFPVSGVLE 181

Query: 518 RQREVNARRKSGVLSHFNSGEGEVGEGLRLIAKKYKGWLMYYQVMFYGXXXXXXXXXXXX 339
            +     + K  V    N  E  + + +R IA++YK WL YYQVM YG            
Sbjct: 182 VETMCGKKGKESVTDFLN--EANINDAIREIARRYKHWLTYYQVMLYG---ETPQWHCRS 236

Query: 338 XXXDKSENLLNMKSNTESSHSPERE-CSQQQAYSSFEKVHPLDPLEY 201
              D+S++   + ++++SS   E+E CSQ   +   EKVHPLD   Y
Sbjct: 237 SYNDESQDFWQVSNSSDSSELIEQERCSQTYKH---EKVHPLDSKAY 280


>ref|XP_003547380.1| PREDICTED: uncharacterized protein LOC100782870 [Glycine max]
          Length = 1302

 Score =  176 bits (447), Expect = 5e-42
 Identities = 102/222 (45%), Positives = 135/222 (60%)
 Frame = -1

Query: 878 FFEFSEQSIISNLYWGIESIEAAIQAKNNAEEKIIRLKNAEKMLQVPALLGEHGVTAEIP 699
           FFEFSEQS++SNLYWGI+SIEAAIQA+   EE+  RL+N+E+MLQVPA+L E  VTA IP
Sbjct: 45  FFEFSEQSVLSNLYWGIDSIEAAIQAQQ-PEERSFRLRNSEQMLQVPAMLDEEEVTATIP 103

Query: 698 NXXXXXXXXXXXXXVRKLQNDEWQVAIHFLQALMVSPMLVFKEFAPKLCTNIFESCIVSE 519
           N             VRKLQ DEWQ A+HFLQA++VSP LV+ EFA +LC ++F    ++ 
Sbjct: 104 NRYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPKLVWTEFASQLCESLFPQSGITM 163

Query: 518 RQREVNARRKSGVLSHFNSGEGEVGEGLRLIAKKYKGWLMYYQVMFYGXXXXXXXXXXXX 339
            QR  ++R    V     S E E+ E ++ +A+KYK WL+YYQVM YG            
Sbjct: 164 MQRNSSSRSLESV-----SSEDEMDEAIKEVARKYKEWLVYYQVMLYGETPWWRSYCSKQ 218

Query: 338 XXXDKSENLLNMKSNTESSHSPERECSQQQAYSSFEKVHPLD 213
              D      +  S+T   H P     + ++ + +EKVHPLD
Sbjct: 219 SPRDVPNT--SCVSSTSVQHEP-----RLKSCNMYEKVHPLD 253


>ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|222838614|gb|EEE76979.1|
           predicted protein [Populus trichocarpa]
          Length = 1305

 Score =  175 bits (444), Expect = 1e-41
 Identities = 104/226 (46%), Positives = 139/226 (61%), Gaps = 4/226 (1%)
 Frame = -1

Query: 878 FFEFSEQSIISNLYWGIESIEAAIQAKNNAEEKIIRLKNAEKMLQVPALLGEHGVTAEIP 699
           FFEFSE S++SNLYWGIESIEAAIQAK   EEK   L+N+E++LQVPALL EHGVTA I 
Sbjct: 63  FFEFSEHSVLSNLYWGIESIEAAIQAKF-PEEKTDHLRNSERLLQVPALLDEHGVTAGIQ 121

Query: 698 NXXXXXXXXXXXXXVRKLQNDEWQVAIHFLQALMVSPMLVFKEFAPKLCTNIFESCIVSE 519
           N             ++KLQNDEWQVA+H+LQA++VSP LV  EFAP+ C  +F     SE
Sbjct: 122 NQFLVCFSYFYLSAIKKLQNDEWQVALHYLQAMLVSPRLVRTEFAPEFCRVLFPLSNKSE 181

Query: 518 RQREVNARRKSGVLSHFNSGEGEVGEGLRLIAKKYKGWLMYYQVMFYGXXXXXXXXXXXX 339
            + E          S ++ GE    E +R IA++YK WLMY Q+M +G            
Sbjct: 182 IEDE----------SSWDFGEDNTDEAIRQIARRYKHWLMYCQIMLHGETSGHCRSRNTS 231

Query: 338 XXXDKSENLLN-MKSNTESSHSPER-EC--SQQQAYSSFEKVHPLD 213
               +S++L + MKS+++ S+S ++  C  +  +    +EKVHPLD
Sbjct: 232 SPDKESQDLSHVMKSSSDLSNSVKQGHCLHNYHKKLMQYEKVHPLD 277


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