BLASTX nr result

ID: Cnidium21_contig00023525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023525
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN23834.1| RSH1 [Ipomoea nil]                                      57   2e-12
dbj|BAC76004.1| RelA-SpoT like protein RSH1 [Nicotiana tabacum]        50   2e-11
ref|XP_002320997.1| predicted protein [Populus trichocarpa] gi|2...    48   8e-10
ref|XP_003520744.1| PREDICTED: GTP pyrophosphokinase-like [Glyci...    51   2e-07
ref|XP_003553659.1| PREDICTED: GTP pyrophosphokinase-like [Glyci...    50   5e-07

>gb|ADN23834.1| RSH1 [Ipomoea nil]
          Length = 885

 Score = 57.0 bits (136), Expect(2) = 2e-12
 Identities = 29/51 (56%), Positives = 36/51 (70%)
 Frame = -3

Query: 432 SSHMQHTSPEAKGELLMQGNGFDNWIPANIPMHKEVMLLPGLENW*ASGVA 280
           S H+QH S +A+GE L QGNG    I ANIPM++EV   PGLENW A+ V+
Sbjct: 738 SKHLQHVSLKAEGETLSQGNGVGRTICANIPMYREV--FPGLENWLANKVS 786



 Score = 41.2 bits (95), Expect(2) = 2e-12
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = -2

Query: 637 ATLSVFEFTPDLASEFVADFEEKDCVKEVSDHSRGIKYKWEKLLRNV 497
           A LS  E T +  +EF A+  +    ++V D S+G K+ WEK+L+NV
Sbjct: 661 AALSATEITAESVNEFAAESGDDSETEKVFDSSKGTKHTWEKILKNV 707


>dbj|BAC76004.1| RelA-SpoT like protein RSH1 [Nicotiana tabacum]
          Length = 876

 Score = 50.1 bits (118), Expect(2) = 2e-11
 Identities = 28/48 (58%), Positives = 32/48 (66%)
 Frame = -3

Query: 423 MQHTSPEAKGELLMQGNGFDNWIPANIPMHKEVMLLPGLENW*ASGVA 280
           MQH S +A GE L QGNG    I ANIP ++EV  LPGL+ W AS VA
Sbjct: 735 MQHMSLKATGETLSQGNGVGKVILANIPRYREV--LPGLDGWLASKVA 780



 Score = 45.4 bits (106), Expect(2) = 2e-11
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = -2

Query: 637 ATLSVFEFTPDLASEFVADFEEKDCVKEVSDHSRGIKYKWEKLLRNV 497
           A LS  E T D   EFVA+ E    ++E++D+S+  K+ WEK+L+NV
Sbjct: 655 AALSATEITVDSVKEFVAESEGDSGLEELADYSKETKHSWEKILKNV 701


>ref|XP_002320997.1| predicted protein [Populus trichocarpa] gi|222861770|gb|EEE99312.1|
           predicted protein [Populus trichocarpa]
          Length = 892

 Score = 48.1 bits (113), Expect(2) = 8e-10
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = -3

Query: 435 SSSHMQHTSPEAKGELLMQGNGFDNWIPANIPMHKEVMLLPGLENW*ASGVA 280
           +  H +H   + KG+LL QGNG    I A+IP +KEV  LPGLE+W AS VA
Sbjct: 747 NGKHNKHV--QTKGDLLSQGNGVAKMIQASIPRYKEV--LPGLESWQASKVA 794



 Score = 41.6 bits (96), Expect(2) = 8e-10
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = -2

Query: 637 ATLSVFEFTPDLASEFVADFEEKDCVKEVSDHSRGIKYKWEKLLRNV 497
           A LS  E T D  ++F+AD E +  V+++SD+++  +  WEK+L NV
Sbjct: 674 AALSAAEITADSVNDFIADSEGESEVEDISDNNKRSRPLWEKILMNV 720


>ref|XP_003520744.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
          Length = 882

 Score = 50.8 bits (120), Expect(2) = 2e-07
 Identities = 26/51 (50%), Positives = 33/51 (64%)
 Frame = -3

Query: 432 SSHMQHTSPEAKGELLMQGNGFDNWIPANIPMHKEVMLLPGLENW*ASGVA 280
           + H+QH S   KGE+L+QGN     I  NIP +KEV  LPGLE+W A  +A
Sbjct: 735 NKHVQHESFNGKGEMLLQGNLVAKMIQVNIPRYKEV--LPGLESWQAQKIA 783



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -2

Query: 637 ATLSVFEFTPDLASEFVADFEEKDCVKEVSDHSRGIKYKWEKLLRN 500
           A  S  + T +  ++FV D +     +EVS  S G KY W K+  N
Sbjct: 659 AARSAADITTEAVNDFVIDSDGDSESEEVSKGSSGSKYTWGKMFVN 704


>ref|XP_003553659.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
          Length = 882

 Score = 50.1 bits (118), Expect(2) = 5e-07
 Identities = 26/51 (50%), Positives = 33/51 (64%)
 Frame = -3

Query: 432 SSHMQHTSPEAKGELLMQGNGFDNWIPANIPMHKEVMLLPGLENW*ASGVA 280
           + H+QH S   KGE+L+QGN     I  NIP +KEV  LPGLE+W A  +A
Sbjct: 735 NKHVQHESFNGKGEMLLQGNLVAKIIQVNIPRYKEV--LPGLESWQAQKIA 783



 Score = 30.0 bits (66), Expect(2) = 5e-07
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -2

Query: 637 ATLSVFEFTPDLASEFVADFEEKDCVKEVSDHSRGIKYKWEKLLRN 500
           A  S  + T +  ++FV D +     +E+S  S G KY W K+  N
Sbjct: 659 AARSAADITTEAVNDFVTDSDGDSESEELSKGSSGSKYTWGKMFVN 704


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