BLASTX nr result
ID: Cnidium21_contig00023519
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00023519
(1187 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin... 382 e-144
ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interactin... 357 e-134
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2... 347 e-132
ref|XP_003535073.1| PREDICTED: U3 small nucleolar RNA-interactin... 357 e-132
ref|XP_003594504.1| Pre-mRNA-processing factor [Medicago truncat... 348 e-131
>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
[Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
protein product [Vitis vinifera]
Length = 519
Score = 382 bits (981), Expect(2) = e-144
Identities = 181/242 (74%), Positives = 206/242 (85%)
Frame = +2
Query: 2 KGFSASKDGTIVQWDIESGKSEKYKWPSDEVLKSHGLKDPQGRAVKHSKHVLALAVSSDG 181
KGFSASKDGTIVQWD++SGK EKY WP++EVLKSHG KDPQGRA+KHSKHVLALAVSSDG
Sbjct: 178 KGFSASKDGTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDG 237
Query: 182 RYLATGGLDRHIHLWDTRSREHIQAFTGHKGPVSCLTFRQXXXXXXXXXXXXXXXXXXXX 361
RYLA+GG DRH+HLWDTR+REH++AF GH+GPVSCLTFRQ
Sbjct: 238 RYLASGGFDRHVHLWDTRTREHLRAFPGHRGPVSCLTFRQ-------------------- 277
Query: 362 XXLTFRQGTSELFSGSFDRTIKVWNADDRAYITTLFGHQSEVLTIDCLRKERILTVGRDR 541
GTSELFSGSFDRTIK+W+A+DRAYIT+LFGHQSEVL+IDCLRKER+LTVGRDR
Sbjct: 278 -------GTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVLSIDCLRKERVLTVGRDR 330
Query: 542 TMHLWKVPEESQLIYRASASSLECCCFISNDEFLSGSDDGSIEQWSVLRKKPVHIIKNAH 721
+M LWKVPEES+L++RA ASSLECCCFI+NDEFLSGSDDGSIE W +LRKKPV+I+KNAH
Sbjct: 331 SMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSGSDDGSIELWGMLRKKPVYIVKNAH 390
Query: 722 AL 727
AL
Sbjct: 391 AL 392
Score = 157 bits (396), Expect(2) = e-144
Identities = 78/120 (65%), Positives = 96/120 (80%), Gaps = 3/120 (2%)
Frame = +3
Query: 795 EHSEDTRLSNGHKENGINEDP---CLSAHSWVGSVAVCRNSDLASSGAGNGAIRLWEIER 965
E S+ ++ NG+ ENG + C +A+SWV SV VCR+SDLA+SGA NG++RLW I
Sbjct: 400 EQSDVGKIPNGYIENGNHNHEDYNCSTAYSWVSSVTVCRSSDLAASGAANGSVRLWAIGS 459
Query: 966 ESKGLRPLFELPLVGFVNSLAFAKSGKFLVAAVGQEPRLGRWGRVSAARNGVALHSLQLS 1145
E+K +RPLF LPLVGFVNSLAF+KSG+FLVA VGQEPRLGRWGR+ AARNGVA+ SL+LS
Sbjct: 460 ETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKLS 519
>ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like
isoform 1 [Glycine max]
Length = 496
Score = 357 bits (915), Expect(2) = e-134
Identities = 168/242 (69%), Positives = 196/242 (80%)
Frame = +2
Query: 2 KGFSASKDGTIVQWDIESGKSEKYKWPSDEVLKSHGLKDPQGRAVKHSKHVLALAVSSDG 181
KGFSASKDGTI+QWD+ SG+ E+YKWPSD VLKSHGLKDPQG A + SK VLALA SSDG
Sbjct: 156 KGFSASKDGTIMQWDVNSGQCERYKWPSDSVLKSHGLKDPQGSATRQSKQVLALAASSDG 215
Query: 182 RYLATGGLDRHIHLWDTRSREHIQAFTGHKGPVSCLTFRQXXXXXXXXXXXXXXXXXXXX 361
RYLATGGLDRHIH+WDTR+REH+Q+F GH+GPVSCLTFRQ
Sbjct: 216 RYLATGGLDRHIHIWDTRTREHLQSFPGHRGPVSCLTFRQ-------------------- 255
Query: 362 XXLTFRQGTSELFSGSFDRTIKVWNADDRAYITTLFGHQSEVLTIDCLRKERILTVGRDR 541
GTSELFSGSFDRTIK+WN +DR Y++TLFGHQSEVL+IDCLRKER+LT GRDR
Sbjct: 256 -------GTSELFSGSFDRTIKIWNVEDRTYMSTLFGHQSEVLSIDCLRKERVLTAGRDR 308
Query: 542 TMHLWKVPEESQLIYRASASSLECCCFISNDEFLSGSDDGSIEQWSVLRKKPVHIIKNAH 721
+M L+KV EES+L++RA ASSLECCCF+ NDE SGSDDGSIE W+V+RKKP++I++NAH
Sbjct: 309 SMQLFKVHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIELWTVMRKKPIYILRNAH 368
Query: 722 AL 727
AL
Sbjct: 369 AL 370
Score = 151 bits (381), Expect(2) = e-134
Identities = 74/121 (61%), Positives = 93/121 (76%), Gaps = 3/121 (2%)
Frame = +3
Query: 789 KLEHSEDTRLSNGHKENGIN---EDPCLSAHSWVGSVAVCRNSDLASSGAGNGAIRLWEI 959
K + + +L NG+ ENG N + CLS SWV +V+VCRNSDLA+SGAGNG++RLWEI
Sbjct: 376 KSDQKDSEKLPNGNLENGYNHPKDHHCLSVFSWVSAVSVCRNSDLAASGAGNGSVRLWEI 435
Query: 960 ERESKGLRPLFELPLVGFVNSLAFAKSGKFLVAAVGQEPRLGRWGRVSAARNGVALHSLQ 1139
E ++K ++ L +PL GFVNSLAFAKSG+FLVA VGQEPRLGRWGR ARNGV++ L+
Sbjct: 436 ESDTKDIKSLCNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGRWGRNPEARNGVSILPLK 495
Query: 1140 L 1142
L
Sbjct: 496 L 496
>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
predicted protein [Populus trichocarpa]
Length = 502
Score = 347 bits (890), Expect(2) = e-132
Identities = 162/244 (66%), Positives = 199/244 (81%)
Frame = +2
Query: 2 KGFSASKDGTIVQWDIESGKSEKYKWPSDEVLKSHGLKDPQGRAVKHSKHVLALAVSSDG 181
KGFSASKDGTI+ WD++SGK+EKY+WP+DE+L+SHG K+P+GRA KHS++VLALAVS+DG
Sbjct: 175 KGFSASKDGTILHWDVDSGKAEKYQWPNDEILRSHGAKNPEGRATKHSRNVLALAVSTDG 234
Query: 182 RYLATGGLDRHIHLWDTRSREHIQAFTGHKGPVSCLTFRQXXXXXXXXXXXXXXXXXXXX 361
RYLA+GGLDRH+HLWDTR+REHIQAF GHKGPVSCLTFR+
Sbjct: 235 RYLASGGLDRHVHLWDTRTREHIQAFPGHKGPVSCLTFRK-------------------- 274
Query: 362 XXLTFRQGTSELFSGSFDRTIKVWNADDRAYITTLFGHQSEVLTIDCLRKERILTVGRDR 541
G+SELFSGS+DR+IK+WN +DRAY+ TLFGHQSE+LTIDCL +ER+L VGRDR
Sbjct: 275 -------GSSELFSGSYDRSIKIWNVEDRAYMNTLFGHQSELLTIDCLWQERVLAVGRDR 327
Query: 542 TMHLWKVPEESQLIYRASASSLECCCFISNDEFLSGSDDGSIEQWSVLRKKPVHIIKNAH 721
+M L+KV +ES+LI+R+S SSLECCCFI N EF+SGSDDG+IE WSV +KKPV+I+KNAH
Sbjct: 328 SMQLFKVHDESRLIFRSSTSSLECCCFIDNSEFVSGSDDGNIELWSVQKKKPVYIVKNAH 387
Query: 722 ALQT 733
T
Sbjct: 388 TSST 391
Score = 152 bits (384), Expect(2) = e-132
Identities = 77/119 (64%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
Frame = +3
Query: 789 KLEHSEDTRLSNGH-KENGINEDPCLSAHSWVGSVAVCRNSDLASSGAGNGAIRLWEIER 965
K H+ T ++NG K+NG N + + A SWV SV VCR SDLA+SGAGNG++RLW +E
Sbjct: 384 KNAHTSSTDVNNGELKDNGRNYNGHV-ASSWVSSVGVCRGSDLAASGAGNGSVRLWAVEG 442
Query: 966 ESKGLRPLFELPLVGFVNSLAFAKSGKFLVAAVGQEPRLGRWGRVSAARNGVALHSLQL 1142
KG+RPL++LPL GFVNSLAFAKSGKFL+A VGQEPRLGRWG SAARNGVA+ L+L
Sbjct: 443 AGKGIRPLYDLPLTGFVNSLAFAKSGKFLLAGVGQEPRLGRWGHNSAARNGVAIQQLKL 501
>ref|XP_003535073.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like
isoform 2 [Glycine max]
Length = 479
Score = 357 bits (915), Expect(2) = e-132
Identities = 168/242 (69%), Positives = 196/242 (80%)
Frame = +2
Query: 2 KGFSASKDGTIVQWDIESGKSEKYKWPSDEVLKSHGLKDPQGRAVKHSKHVLALAVSSDG 181
KGFSASKDGTI+QWD+ SG+ E+YKWPSD VLKSHGLKDPQG A + SK VLALA SSDG
Sbjct: 156 KGFSASKDGTIMQWDVNSGQCERYKWPSDSVLKSHGLKDPQGSATRQSKQVLALAASSDG 215
Query: 182 RYLATGGLDRHIHLWDTRSREHIQAFTGHKGPVSCLTFRQXXXXXXXXXXXXXXXXXXXX 361
RYLATGGLDRHIH+WDTR+REH+Q+F GH+GPVSCLTFRQ
Sbjct: 216 RYLATGGLDRHIHIWDTRTREHLQSFPGHRGPVSCLTFRQ-------------------- 255
Query: 362 XXLTFRQGTSELFSGSFDRTIKVWNADDRAYITTLFGHQSEVLTIDCLRKERILTVGRDR 541
GTSELFSGSFDRTIK+WN +DR Y++TLFGHQSEVL+IDCLRKER+LT GRDR
Sbjct: 256 -------GTSELFSGSFDRTIKIWNVEDRTYMSTLFGHQSEVLSIDCLRKERVLTAGRDR 308
Query: 542 TMHLWKVPEESQLIYRASASSLECCCFISNDEFLSGSDDGSIEQWSVLRKKPVHIIKNAH 721
+M L+KV EES+L++RA ASSLECCCF+ NDE SGSDDGSIE W+V+RKKP++I++NAH
Sbjct: 309 SMQLFKVHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIELWTVMRKKPIYILRNAH 368
Query: 722 AL 727
AL
Sbjct: 369 AL 370
Score = 141 bits (356), Expect(2) = e-132
Identities = 72/116 (62%), Positives = 88/116 (75%), Gaps = 7/116 (6%)
Frame = +3
Query: 816 LSNGHK----ENGIN---EDPCLSAHSWVGSVAVCRNSDLASSGAGNGAIRLWEIERESK 974
L N H +NG N + CLS SWV +V+VCRNSDLA+SGAGNG++RLWEIE ++K
Sbjct: 364 LRNAHALPVDKNGYNHPKDHHCLSVFSWVSAVSVCRNSDLAASGAGNGSVRLWEIESDTK 423
Query: 975 GLRPLFELPLVGFVNSLAFAKSGKFLVAAVGQEPRLGRWGRVSAARNGVALHSLQL 1142
++ L +PL GFVNSLAFAKSG+FLVA VGQEPRLGRWGR ARNGV++ L+L
Sbjct: 424 DIKSLCNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGRWGRNPEARNGVSILPLKL 479
>ref|XP_003594504.1| Pre-mRNA-processing factor [Medicago truncatula]
gi|355483552|gb|AES64755.1| Pre-mRNA-processing factor
[Medicago truncatula]
Length = 514
Score = 348 bits (894), Expect(2) = e-131
Identities = 163/244 (66%), Positives = 194/244 (79%)
Frame = +2
Query: 2 KGFSASKDGTIVQWDIESGKSEKYKWPSDEVLKSHGLKDPQGRAVKHSKHVLALAVSSDG 181
KGFSASKDG+IVQWD+ESGK E+YKWP D VLKSHGLKDPQG A K S+ +L LA SSDG
Sbjct: 163 KGFSASKDGSIVQWDVESGKCERYKWPIDSVLKSHGLKDPQGSAAKQSRQILTLAASSDG 222
Query: 182 RYLATGGLDRHIHLWDTRSREHIQAFTGHKGPVSCLTFRQXXXXXXXXXXXXXXXXXXXX 361
RYLATGGLDRHIH+WDTR+REH+QAF GH+GPVS
Sbjct: 223 RYLATGGLDRHIHIWDTRTREHLQAFPGHRGPVS-------------------------- 256
Query: 362 XXLTFRQGTSELFSGSFDRTIKVWNADDRAYITTLFGHQSEVLTIDCLRKERILTVGRDR 541
L FR+G++ELFSGSFDRT+K+WN +DR Y+ TLFGHQSEVL+IDCLRKER+L+ GRDR
Sbjct: 257 -SLAFREGSTELFSGSFDRTVKIWNVEDRTYMNTLFGHQSEVLSIDCLRKERVLSAGRDR 315
Query: 542 TMHLWKVPEESQLIYRASASSLECCCFISNDEFLSGSDDGSIEQWSVLRKKPVHIIKNAH 721
+M L+KV EES+L++RA ASSLECCCF++N+EFLSGSDDGSIE W +RKKP+HI++NAH
Sbjct: 316 SMQLFKVHEESRLVFRAPASSLECCCFVNNEEFLSGSDDGSIELWGAVRKKPIHILRNAH 375
Query: 722 ALQT 733
AL T
Sbjct: 376 ALLT 379
Score = 148 bits (374), Expect(2) = e-131
Identities = 77/132 (58%), Positives = 93/132 (70%), Gaps = 13/132 (9%)
Frame = +3
Query: 789 KLEHSEDTRLSNGHKENGINEDP---CLSAHSWVGSVAVCRNSDLASSGAGNGAIRLWEI 959
K + ++ RL NG+ ENG + C S HSWV +V VCRNSDLA+SGAGNG +RLW I
Sbjct: 383 KSDQNDSERLPNGNLENGHHHPENHHCSSVHSWVSAVTVCRNSDLAASGAGNGFVRLWTI 442
Query: 960 ERESKGLRPLFELPLVGFVNSLAFAKSGKFLVAAVGQ----------EPRLGRWGRVSAA 1109
E E+K ++PL +PLVGFVNSLAFAKS KFLVA VGQ EPRLGRWGR+ A
Sbjct: 443 ENETKDIKPLHNVPLVGFVNSLAFAKSAKFLVAGVGQVLKLLNSACIEPRLGRWGRIREA 502
Query: 1110 RNGVALHSLQLS 1145
RNGV++ L+LS
Sbjct: 503 RNGVSILPLKLS 514