BLASTX nr result

ID: Cnidium21_contig00023518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023518
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 ...    79   1e-12
ref|XP_002511411.1| protein binding protein, putative [Ricinus c...    77   7e-12
emb|CAN68092.1| hypothetical protein VITISV_012749 [Vitis vinifera]    75   2e-11
ref|XP_003608971.1| RING finger protein [Medicago truncatula] gi...    65   3e-08
ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...    63   1e-07

>ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 [Vitis vinifera]
          Length = 381

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 42/67 (62%), Positives = 47/67 (70%)
 Frame = +2

Query: 554 SPAAVVTAAPYVRTQPPSPSYLLRLQGLLRSVRTENAGPSSNADLTLEAAENGGLLVVMQ 733
           S A+VVTA  YVR QPPS  Y+LRLQG LR VRTENAG  ++AD  LE AENGGL VV  
Sbjct: 298 SSASVVTATRYVRVQPPSQGYMLRLQGFLRPVRTENAGAGNDADNALENAENGGLPVVTD 357

Query: 734 PNRSREP 754
              + EP
Sbjct: 358 DLTNTEP 364


>ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
           gi|223550526|gb|EEF52013.1| protein binding protein,
           putative [Ricinus communis]
          Length = 381

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
 Frame = +2

Query: 557 PAAVVTAAPYVRTQPPSPSYLLRLQGLLRSVRTENAGPSSNADLTLEAAENGGLLVVMQP 736
           PAA VT   YVRTQP S SYLLRLQGLLR +RTE+AG SS+ D+ LEA E+G  +V  + 
Sbjct: 299 PAADVTTNRYVRTQPSSQSYLLRLQGLLRPIRTEDAGSSSDVDVDLEAVEHGREVVATRE 358

Query: 737 NRSREP----GQTLAERSSPLPH 793
               EP    G  L  +SSP  H
Sbjct: 359 AMVMEPVSLVGSMLVGQSSPPQH 381


>emb|CAN68092.1| hypothetical protein VITISV_012749 [Vitis vinifera]
          Length = 943

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 39/57 (68%), Positives = 43/57 (75%)
 Frame = +2

Query: 554 SPAAVVTAAPYVRTQPPSPSYLLRLQGLLRSVRTENAGPSSNADLTLEAAENGGLLV 724
           S A+VVTA  YVR QPPS  Y+LRLQG LR VRTENAG  ++AD  LE AENGGL V
Sbjct: 610 SSASVVTATRYVRVQPPSQGYMLRLQGFLRPVRTENAGAGNDADNALENAENGGLPV 666


>ref|XP_003608971.1| RING finger protein [Medicago truncatula]
           gi|355510026|gb|AES91168.1| RING finger protein
           [Medicago truncatula]
          Length = 365

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 37/68 (54%), Positives = 42/68 (61%)
 Frame = +2

Query: 554 SPAAVVTAAPYVRTQPPSPSYLLRLQGLLRSVRTENAGPSSNADLTLEAAENGGLLVVMQ 733
           S  +VVT   YVR QP S SYLLRLQGLLR VRTE AGP  + D  L+ AENG   V+  
Sbjct: 281 SSDSVVTTTRYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDNALQNAENGVAPVLTT 340

Query: 734 PNRSREPG 757
               + PG
Sbjct: 341 KCTKQSPG 348


>ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
          Length = 382

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 35/60 (58%), Positives = 39/60 (65%)
 Frame = +2

Query: 554 SPAAVVTAAPYVRTQPPSPSYLLRLQGLLRSVRTENAGPSSNADLTLEAAENGGLLVVMQ 733
           S A+VVT   YVR QP S SY LRLQGLLR V  E AGP  + D  LE AENG + +V Q
Sbjct: 298 SSASVVTTTRYVRGQPSSQSYRLRLQGLLRPVGAEIAGPVGDIDNVLENAENGSVSIVTQ 357


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