BLASTX nr result

ID: Cnidium21_contig00023517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023517
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...    98   8e-19
ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation...    98   8e-19
ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...    97   1e-18
ref|XP_002305792.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002329785.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like isoform 1 [Glycine max]
           gi|356555340|ref|XP_003545991.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit D-like isoform 2
           [Glycine max]
          Length = 565

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/63 (76%), Positives = 53/63 (84%)
 Frame = +3

Query: 3   VKDPIKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPIENADGEESVTAASNDVGDKEIK 182
           VKDP KPQVRIYEVPADAFENDYVEEPLPEDEQVQPP E A+G E+  A +NDV DK+I 
Sbjct: 504 VKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPAEGAEGGEA-AATTNDVEDKQID 562

Query: 183 AEA 191
            +A
Sbjct: 563 GQA 565


>ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Glycine max]
          Length = 557

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/63 (76%), Positives = 53/63 (84%)
 Frame = +3

Query: 3   VKDPIKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPIENADGEESVTAASNDVGDKEIK 182
           VKDP KPQVRIYEVPADAFENDYVEEPLPEDEQVQPP E A+G E+ T  +NDV DK+I 
Sbjct: 496 VKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPSEGAEGGEA-TTTTNDVEDKQID 554

Query: 183 AEA 191
            +A
Sbjct: 555 GQA 557


>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Vitis vinifera]
          Length = 567

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/63 (77%), Positives = 53/63 (84%)
 Frame = +3

Query: 3   VKDPIKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPIENADGEESVTAASNDVGDKEIK 182
           VKDP KPQVRIYEVPADAFENDYVEEPLPEDEQVQPP E A+G E+  AA  DV +KE+ 
Sbjct: 506 VKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPAEEANGGEA-NAAITDVEEKEVT 564

Query: 183 AEA 191
           AEA
Sbjct: 565 AEA 567


>ref|XP_002305792.1| predicted protein [Populus trichocarpa] gi|222848756|gb|EEE86303.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/63 (73%), Positives = 51/63 (80%)
 Frame = +3

Query: 3   VKDPIKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPIENADGEESVTAASNDVGDKEIK 182
           VKDP KPQVRIYEVPADAFENDYVEEPLPE+EQ QPP ENA+  E+    +NDV DKEI 
Sbjct: 495 VKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQAQPPEENAENAEA-NGVTNDVEDKEID 553

Query: 183 AEA 191
            +A
Sbjct: 554 VQA 556


>ref|XP_002329785.1| predicted protein [Populus trichocarpa] gi|222870847|gb|EEF07978.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/62 (74%), Positives = 51/62 (82%)
 Frame = +3

Query: 3   VKDPIKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPIENADGEESVTAASNDVGDKEIK 182
           VKDP KPQVRIYEVPADAFENDYVEEPLPE+EQ QPP ENA+  E+    +NDV DKEI 
Sbjct: 513 VKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQAQPPEENAENTEA-NGVTNDVEDKEIG 571

Query: 183 AE 188
           A+
Sbjct: 572 AQ 573


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