BLASTX nr result

ID: Cnidium21_contig00023516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023516
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    77   1e-12
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    77   1e-12
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    75   4e-12

>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = +1

Query: 1   DRISELPLNIQEIILCFLPIQDAVRTSVLSTKWRHCWTTIPHLTFDHRFSILDKISQCRD 180
           DRIS LP ++ + IL  LPI+DAVRTS LS KWR+ W+ IPHL FD + + +      +D
Sbjct: 6   DRISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITS----QD 61

Query: 181 SKEKAYILVSMINKVLLLHNGPILK 255
                  LV++I+ VLLLHNGPI K
Sbjct: 62  QTIAKNNLVNIIDNVLLLHNGPIYK 86


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/85 (49%), Positives = 53/85 (62%)
 Frame = +1

Query: 1   DRISELPLNIQEIILCFLPIQDAVRTSVLSTKWRHCWTTIPHLTFDHRFSILDKISQCRD 180
           D IS+LP +I E IL  LPI+DAVRTS+LS+KWR+ WTT+ HL FD +      I  C D
Sbjct: 8   DLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWTTLTHLVFDDKC-----IRMCSD 62

Query: 181 SKEKAYILVSMINKVLLLHNGPILK 255
                  +V+ I + L LH GPI K
Sbjct: 63  RPVVENCMVNFITRALFLHQGPIHK 87


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
 Frame = +1

Query: 1   DRISELPLNIQEIILCFLPIQDAVRTSVLSTKWRHCWTTIPHLTFDHRFSILDKISQC-R 177
           DRIS LP +I + IL  LPI++AVRTS+LSTKWR+ W T+P+L FD         SQC  
Sbjct: 17  DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFD---------SQCIS 67

Query: 178 DSKEKAYILVS----MINKVLLLHNGPILK 255
           D+ E   ++ S    +I+ VLLLH+GPI K
Sbjct: 68  DTSEDLLVIKSKLSRIIDHVLLLHSGPIKK 97


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
 Frame = +1

Query: 1   DRISELPLNIQEIILCFLPIQDAVRTSVLSTKWRHCWTTIPHLTFDHRFSILDKISQC-R 177
           DRIS LP +I + IL  LPI++AVRTS+LSTKWR+ W T+P+L FD         SQC  
Sbjct: 249 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFD---------SQCIS 299

Query: 178 DSKEKAYILVS----MINKVLLLHNGPILK 255
           D+ E   ++ S    +I+ VLLLH+GPI K
Sbjct: 300 DTSEDLLVIKSKLSRIIDHVLLLHSGPIKK 329


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = +1

Query: 1   DRISELPLNIQEIILCFLPIQDAVRTSVLSTKWRHCWTTIPHLTFDHRFSILDKISQCRD 180
           DRIS LP ++ + IL  L I+DAVRTS LS KWR+ W  IPHL FD++   +    Q   
Sbjct: 16  DRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLVFDNKCVSIPSQDQTL- 74

Query: 181 SKEKAYILVSMINKVLLLHNGPILK 255
            K+K   LV++I+ VLLLHNGPI K
Sbjct: 75  IKDK---LVNIIDHVLLLHNGPIQK 96


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