BLASTX nr result

ID: Cnidium21_contig00023514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023514
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172169.2| putative leucine-rich repeat transmembrane prot...   269   6e-70
gb|ACN59222.1| leucine-rich repeat receptor-like protein kinase ...   269   6e-70
ref|XP_002892361.1| predicted protein [Arabidopsis lyrata subsp....   263   3e-68
ref|XP_002326064.1| predicted protein [Populus trichocarpa] gi|2...   247   2e-63
ref|XP_002533344.1| protein with unknown function [Ricinus commu...   246   3e-63

>ref|NP_172169.2| putative leucine-rich repeat transmembrane protein kinase
            [Arabidopsis thaliana]
            gi|264664524|sp|C0LGD7.2|Y1684_ARATH RecName:
            Full=Probable LRR receptor-like serine/threonine-protein
            kinase At1g06840; Flags: Precursor
            gi|332189923|gb|AEE28044.1| putative leucine-rich repeat
            transmembrane protein kinase [Arabidopsis thaliana]
          Length = 953

 Score =  269 bits (687), Expect = 6e-70
 Identities = 140/265 (52%), Positives = 173/265 (65%), Gaps = 2/265 (0%)
 Frame = -2

Query: 817  SYKNMSKLLKLSLRNCSLQGSIPDLSPIPNLAYIDLSSNQLQGSIPSNKLSEAITTIDLS 638
            SY NMSKLLK+SLRNCSLQG +PDLS IPNL Y+DLS NQL GSIP+ KLS++ITTIDLS
Sbjct: 247  SYGNMSKLLKMSLRNCSLQGPVPDLSSIPNLGYLDLSQNQLNGSIPAGKLSDSITTIDLS 306

Query: 637  NNNLTGTIPANFSRLPRXXXXXXXXXXXXXXXXSTIWTNRKLNATETLILNLQNNDXXXX 458
            NN+LTGTIP NFS LPR                S IW  R+LN+TE++I++L+NN     
Sbjct: 307  NNSLTGTIPTNFSGLPRLQKLSLANNALSGSIPSRIWQERELNSTESIIVDLRNNGFSNI 366

Query: 457  XXXXXXXPNVTLRLQGNPVCPXXXXXXXXXXXXXXXXXXXXSRIIPDDCPECPSPYEYAR 278
                   PNVT+ LQGNP+C                     +      C +CP PYE++ 
Sbjct: 367  SGRSDLRPNVTVWLQGNPLCSDGNLLRLCGPITEEDINQGSTNSNTTICSDCPPPYEFSP 426

Query: 277  GSPVRCFCAAPLIFGYRLKSPGFIDFRPFFNPFEEYLTSGLQIKSFQLNVDSYEWQKGPR 98
                RCFCAAPL+ GYRLKSPGF DF P+ + FE+Y+TSGL +  +QL +DS++WQKGPR
Sbjct: 427  EPLRRCFCAAPLLVGYRLKSPGFSDFVPYRSEFEQYITSGLSLNLYQLRLDSFQWQKGPR 486

Query: 97   LGMSLRIYPVY--TGNNSNIFNRSE 29
            L M L+ +PV+    NNS IFNRSE
Sbjct: 487  LRMYLKFFPVFGSNANNSFIFNRSE 511


>gb|ACN59222.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis
            thaliana]
          Length = 700

 Score =  269 bits (687), Expect = 6e-70
 Identities = 140/265 (52%), Positives = 173/265 (65%), Gaps = 2/265 (0%)
 Frame = -2

Query: 817  SYKNMSKLLKLSLRNCSLQGSIPDLSPIPNLAYIDLSSNQLQGSIPSNKLSEAITTIDLS 638
            SY NMSKLLK+SLRNCSLQG +PDLS IPNL Y+DLS NQL GSIP+ KLS++ITTIDLS
Sbjct: 247  SYGNMSKLLKMSLRNCSLQGPVPDLSSIPNLGYLDLSQNQLNGSIPAGKLSDSITTIDLS 306

Query: 637  NNNLTGTIPANFSRLPRXXXXXXXXXXXXXXXXSTIWTNRKLNATETLILNLQNNDXXXX 458
            NN+LTGTIP NFS LPR                S IW  R+LN+TE++I++L+NN     
Sbjct: 307  NNSLTGTIPTNFSGLPRLQKLSLANNALSGSIPSRIWQERELNSTESIIVDLRNNGFSNI 366

Query: 457  XXXXXXXPNVTLRLQGNPVCPXXXXXXXXXXXXXXXXXXXXSRIIPDDCPECPSPYEYAR 278
                   PNVT+ LQGNP+C                     +      C +CP PYE++ 
Sbjct: 367  SGRSDLRPNVTVWLQGNPLCSDGNLLRLCGPITEEDINQGSTNSNTTICSDCPPPYEFSP 426

Query: 277  GSPVRCFCAAPLIFGYRLKSPGFIDFRPFFNPFEEYLTSGLQIKSFQLNVDSYEWQKGPR 98
                RCFCAAPL+ GYRLKSPGF DF P+ + FE+Y+TSGL +  +QL +DS++WQKGPR
Sbjct: 427  EPLRRCFCAAPLLVGYRLKSPGFSDFVPYRSEFEQYITSGLSLNLYQLRLDSFQWQKGPR 486

Query: 97   LGMSLRIYPVY--TGNNSNIFNRSE 29
            L M L+ +PV+    NNS IFNRSE
Sbjct: 487  LRMYLKFFPVFGSNANNSFIFNRSE 511


>ref|XP_002892361.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338203|gb|EFH68620.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 941

 Score =  263 bits (672), Expect = 3e-68
 Identities = 140/267 (52%), Positives = 172/267 (64%), Gaps = 4/267 (1%)
 Frame = -2

Query: 817  SYKNMSKLLKLSLRNCSLQGSIPDLSPIPNLAYIDLSSNQLQGSIPSNKLSEAITTIDLS 638
            SY NMSKLLK+SLRNCSLQG +PDLS IPNL Y+DLS NQL GSIP+ KLS+ ITTIDLS
Sbjct: 233  SYGNMSKLLKMSLRNCSLQGPVPDLSSIPNLGYLDLSQNQLNGSIPTGKLSDNITTIDLS 292

Query: 637  NNNLTGTIPANFSRLPRXXXXXXXXXXXXXXXXSTIWTNRKLNATETLILNLQNNDXXXX 458
            +N+LTGTIP NFS LPR                S IW  R+LN+TE++I++L+NN     
Sbjct: 293  SNSLTGTIPTNFSGLPRLQKLSLANNALSGSIPSRIWQERELNSTESIIVDLRNNRFSNI 352

Query: 457  XXXXXXXPNVTLRLQGNPVCP--XXXXXXXXXXXXXXXXXXXXSRIIPDDCPECPSPYEY 284
                   PNVT+ LQGNP+C                       +      C +CP PYE+
Sbjct: 353  SGRSDLRPNVTVWLQGNPLCSDGNLLRLCGPITEEDINQGQGSTNSYTTTCSDCPPPYEF 412

Query: 283  ARGSPVRCFCAAPLIFGYRLKSPGFIDFRPFFNPFEEYLTSGLQIKSFQLNVDSYEWQKG 104
            +     RCFCAAPL+ GYRLKSPGF DF P+ + FEEY+TSGL +  +QL +DS++WQKG
Sbjct: 413  SPEPLRRCFCAAPLLVGYRLKSPGFSDFVPYRSEFEEYITSGLSLNLYQLRLDSFQWQKG 472

Query: 103  PRLGMSLRIYPVY--TGNNSNIFNRSE 29
            PRL M L+ +PV+    NNS IFNRSE
Sbjct: 473  PRLRMYLKFFPVFGSNANNSFIFNRSE 499


>ref|XP_002326064.1| predicted protein [Populus trichocarpa] gi|222862939|gb|EEF00446.1|
           predicted protein [Populus trichocarpa]
          Length = 865

 Score =  247 bits (631), Expect = 2e-63
 Identities = 139/271 (51%), Positives = 162/271 (59%), Gaps = 1/271 (0%)
 Frame = -2

Query: 817 SYKNMSKLLKLSLRNCSLQGSIPDLSPIPNLAYIDLSSNQLQGSIPSNKLSEAITTIDLS 638
           SY NM+KLLKLSLRNCSLQG +PDLS IPNL Y+DLS NQL G IP+NKLS+ ITTIDLS
Sbjct: 160 SYGNMTKLLKLSLRNCSLQGPMPDLSGIPNLGYLDLSFNQLAGPIPTNKLSKNITTIDLS 219

Query: 637 NNNLTGTIPANFSRLPRXXXXXXXXXXXXXXXXSTIWTNRKLNATETLILNLQNNDXXXX 458
            NNL GTIPANFS LP                  T W  R  N TE L L+ +NN     
Sbjct: 220 YNNLNGTIPANFSELPLLQQLSIANNSLSGSVPFTTWQTR-ANGTEGLDLDFENNTLSNI 278

Query: 457 XXXXXXXPNVTLRLQGNPVCPXXXXXXXXXXXXXXXXXXXXSRIIPDDCPE-CPSPYEYA 281
                   NVTLRL+GNPVC                     +        + CPSPYEY+
Sbjct: 279 SGSISLPQNVTLRLKGNPVCSNSSIFQFCESQNNDMNNQSSTESNATCFTQSCPSPYEYS 338

Query: 280 RGSPVRCFCAAPLIFGYRLKSPGFIDFRPFFNPFEEYLTSGLQIKSFQLNVDSYEWQKGP 101
             SP  CFCAAPLIFGYRLKSPGF  F P+   FE YLTSGL++  FQL++ S  W+ GP
Sbjct: 339 PTSPTSCFCAAPLIFGYRLKSPGFSKFVPYRIRFENYLTSGLKLSLFQLDLASVVWESGP 398

Query: 100 RLGMSLRIYPVYTGNNSNIFNRSETSLLLKM 8
           RL M L+++PVY  N +N FN SE   ++ M
Sbjct: 399 RLKMHLKLFPVYV-NGTNTFNTSEARRIISM 428


>ref|XP_002533344.1| protein with unknown function [Ricinus communis]
            gi|223526824|gb|EEF29043.1| protein with unknown function
            [Ricinus communis]
          Length = 844

 Score =  246 bits (629), Expect = 3e-63
 Identities = 134/267 (50%), Positives = 166/267 (62%), Gaps = 4/267 (1%)
 Frame = -2

Query: 817  SYKNMSKLLKLSLRNCSLQGSIPDLSPIPNLAYIDLSSNQLQGSIPSNKLSEAITTIDLS 638
            SY NM+KLLKLSLRNCSL+G IPDLS IPNL Y+DLSSNQL G+IP  +LSE ITTIDLS
Sbjct: 245  SYGNMTKLLKLSLRNCSLRGPIPDLSRIPNLGYLDLSSNQLNGTIPPGRLSENITTIDLS 304

Query: 637  NNNLTGTIPANFSRLPRXXXXXXXXXXXXXXXXSTIWTNRKLNATETLILNLQNN--DXX 464
            NNNLTG+IP+NFS LPR                + +W +R LN +E LIL+ +NN     
Sbjct: 305  NNNLTGSIPSNFSSLPRLQRLSIANNSLSGSIPAALWQSRTLNGSERLILDFENNKLSNI 364

Query: 463  XXXXXXXXXPNVTLRLQGNPVCPXXXXXXXXXXXXXXXXXXXXSRIIPDDCP--ECPSPY 290
                      NVTL LQGNP C                     +      CP   CPSP+
Sbjct: 365  SGSDTISLPQNVTLWLQGNPACSNSNLLQFCGLRNEELNNQSSTN-SSSACPVQACPSPF 423

Query: 289  EYARGSPVRCFCAAPLIFGYRLKSPGFIDFRPFFNPFEEYLTSGLQIKSFQLNVDSYEWQ 110
             Y+  SP+ CFCA PLI GYRLKSPGF DF P+   F+ YLTSGL +K +QL +++ +W+
Sbjct: 424  VYSPTSPISCFCAVPLIIGYRLKSPGFSDFTPYREMFKGYLTSGLNLKLYQLFLETIQWE 483

Query: 109  KGPRLGMSLRIYPVYTGNNSNIFNRSE 29
            +GPRL M  +++PVY  NN++ FN SE
Sbjct: 484  EGPRLKMHFQLFPVY-DNNTHKFNTSE 509


Top